CN185523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185523 vs. ExPASy Swiss-Prot
Match: REMO_SOLTU (Remorin OS=Solanum tuberosum PE=1 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 6.553e-47 Identity = 106/182 (58.24%), Postives = 125/182 (68.68%), Query Frame = -3 Query: 197 SPTTTVAEEKAVTQ------LHDQEKPVDDSKALAVVD-QTPDXXXXXXXXXXXXXXSHDRDVALAEVEKEKRESFIKAWEESEKTKAENKAQKKLSAVAAWENXXXXXXXXXXXXXEEQLERKKAEYAEKMKNKVALVHKEAEEKRAMVEARRGEDVLKAEEIAAKYRATGTTPKKLLGCF 721 +P VA+EKA+ ++EKP DDSKAL VV+ + P+ DRD LA V EKR S IKAWEESEK+KAENKAQKK+SA+ AWEN EEQLE+KKAEY EKMKNK+AL+HKEAEEKRAM+EA+RGED+LKAEE+AAKYRATGT PKK+LG F Sbjct: 24 APKEVVADEKAIVAPALPPPAEEKEKP-DDSKALVVVETKAPEPADEKKEGSI------DRDAVLARVATEKRVSLIKAWEESEKSKAENKAQKKVSAIGAWENSKKANLEAELKKMEEQLEKKKAEYTEKMKNKIALLHKEAEEKRAMIEAKRGEDLLKAEELAAKYRATGTAPKKILGIF 198
BLAST of CN185523 vs. ExPASy Swiss-Prot
Match: Y3126_ARATH (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana GN=At3g61260 PE=1 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.975e-44 Identity = 100/173 (57.80%), Postives = 118/173 (68.21%), Query Frame = -3 Query: 197 TTTVAEEKAVTQLHDQEKPVDDSKALAVVDQTPDXXXXXXXXXXXXXXSHDRDVALAEVEKEKRESFIKAWEESEKTKAENKAQKKLSAVAAWENXXXXXXXXXXXXXEEQLERKKAEYAEKMKNKVALVHKEAEEKRAMVEARRGEDVLKAEEIAAKYRATGTTPKKLLGCF 715 T VAEEK Q E+ DDSKAL VV++ + DRDV LA++ KEKR SF++AWEESEK+KAENKA+KK++ V AWEN EEQLE+KKAEYAE+MKNKVA +HKEAEE+RAM+EA+RGEDVLKAEE AAKYRATG PK GCF Sbjct: 46 TKDVAEEKI--QNPPPEQIFDDSKALTVVEKPVEEPAPAKPASASL----DRDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAKYRATGIVPKATCGCF 212
BLAST of CN185523 vs. ExPASy Swiss-Prot
Match: REMO_ARATH (Remorin OS=Arabidopsis thaliana GN=DBP PE=1 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 5.373e-41 Identity = 95/170 (55.88%), Postives = 117/170 (68.82%), Query Frame = -3 Query: 197 VAEEKAVTQLHDQEKPVDDSKALAVVDQTPDXXXXXXXXXXXXXXSHDRDVALAEVEKEKRESFIKAWEESEKTKAENKAQKKLSAVAAWENXXXXXXXXXXXXXEEQLERKKAEYAEKMKNKVALVHKEAEEKRAMVEARRGEDVLKAEEIAAKYRATGTTPKKLLGCF 706 VA+EK +H+ P +SKALAVV++ + DRDV LA++EKEK+ SFIKAWEESEK+KAEN+AQKK+S V AWEN EE+LE+KKA+Y EKMKNKVA +HK AEEKRAMVEA++GE++LKAEE+ AKYRATG PK GCF Sbjct: 31 VADEK----IHNP--PPVESKALAVVEKPIEEHTPKKASSGSA----DRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRATGVVPKATCGCF 190 The following BLAST results are available for this feature:
BLAST of CN185523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185523 ID=CN185523; Name=CN185523; organism=Citrus sinensis; type=EST; length=768bpback to top |