CN185519

Overview
NameCN185519
Unique NameCN185519
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig121 contig Csv1_Contig121:435..1187. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185519 vs. ExPASy Swiss-Prot
Match: FRI3_SOYBN (Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.716e-48
Identity = 96/138 (69.57%), Postives = 108/138 (78.26%), Query Frame = -3
Query:  338 NIALRGLPXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHEGDAA 751
            N+AL+GL                  MEYQN RGGKVKL SI+ P SEFDH EKGDALYAMELALSLEKLTNEKLL+LHSVA +NND Q+A+F+ESEFLGEQVEAI KI++YV+QLR VGKGHG+WHFDQMLLHE   A
Sbjct:  118 NVALKGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSEFDHEEKGDALYAMELALSLEKLTNEKLLNLHSVASKNNDVQLADFIESEFLGEQVEAIKKISEYVAQLRRVGKGHGVWHFDQMLLHEEGVA 255          
BLAST of CN185519 vs. ExPASy Swiss-Prot
Match: FRI2_VIGUN (Ferritin-2, chloroplastic OS=Vigna unguiculata GN=PFE2 PE=2 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 6.320e-47
Identity = 94/135 (69.63%), Postives = 107/135 (79.26%), Query Frame = -3
Query:  347 NIALRGLPXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHEG 751
            N+ALRGL                  MEYQN RGGKVKL SI+ P SEFDHA+KGDAL+AMELALSLEKLTNEKLL LHSVA +N D Q+A+FVESEFLGEQVE+I +I++YV+QLR VGKGHG+WHFDQMLLHEG
Sbjct:  112 NVALRGLAKFFKESSEEEREHAEKLMEYQNRRGGKVKLQSIVMPLSEFDHADKGDALHAMELALSLEKLTNEKLLHLHSVATKNGDVQLADFVESEFLGEQVESIKRISEYVAQLRRVGKGHGVWHFDQMLLHEG 246          
BLAST of CN185519 vs. ExPASy Swiss-Prot
Match: FRI4_SOYBN (Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 1.078e-46
Identity = 95/139 (68.35%), Postives = 111/139 (79.86%), Query Frame = -3
Query:  338 NIALRGLPXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHE-GDAA 751
            N+ALRGL                  MEYQN RGGKVKL SI+ P S+FDHA+KGDAL+AMELALSLEKLTNEKLL+LHSVA +N D Q+A+FVE+E+LGEQVEAI +I++YV+QLR VGKGHG+WHFDQMLLHE GDAA
Sbjct:  109 NVALRGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSDFDHADKGDALHAMELALSLEKLTNEKLLNLHSVATKNGDVQLADFVETEYLGEQVEAIKRISEYVAQLRRVGKGHGVWHFDQMLLHEGGDAA 247          
BLAST of CN185519 vs. ExPASy Swiss-Prot
Match: FRI1_ARATH (Ferritin-1, chloroplastic OS=Arabidopsis thaliana GN=FER1 PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.408e-46
Identity = 90/133 (67.67%), Postives = 107/133 (80.45%), Query Frame = -3
Query:  353 NIALRGLPXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLH 751
            N+A++GL                 FMEYQN RGG+VKLH I+ P SEF+HAEKGDALYAMELALSLEKLTNEKLL++H VA  NNDPQ+A+FVESEFLGEQ+EAI KI+ Y++QLRM+GKGHG+WHFDQMLL+
Sbjct:  123 NVAMKGLAKFFKESSEEERGHAEKFMEYQNQRGGRVKLHPIVSPISEFEHAEKGDALYAMELALSLEKLTNEKLLNVHKVASENNDPQLADFVESEFLGEQIEAIKKISDYITQLRMIGKGHGVWHFDQMLLN 255          
BLAST of CN185519 vs. ExPASy Swiss-Prot
Match: FRI_PHAVU (Ferritin, chloroplastic OS=Phaseolus vulgaris GN=PFE PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.402e-46
Identity = 91/138 (65.94%), Postives = 105/138 (76.09%), Query Frame = -3
Query:  338 NIALRGLPXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHEGDAA 751
            N+AL+G                   M+YQN RGG+V LH I   PSEF+H EKGDALYAMELALSLEKL NEKL S+HSVADRN DPQ+A+F+ESEFL EQVEAI KI++YV+QLRMVGKGHG+WHFDQ LLH+G AA
Sbjct:  117 NVALKGFARFFKESSEEEREHAEKLMKYQNTRGGRVVLHPIKNVPSEFEHVEKGDALYAMELALSLEKLVNEKLRSVHSVADRNKDPQLADFIESEFLSEQVEAIKKISEYVAQLRMVGKGHGVWHFDQSLLHDGHAA 254          
BLAST of CN185519 vs. ExPASy Swiss-Prot
Match: FRI2_SOYBN (Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.402e-46
Identity = 90/136 (66.18%), Postives = 108/136 (79.41%), Query Frame = -3
Query:  344 NIALRGLPXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHEGD 751
            NIAL+GL                  ++YQN+RGG+V LH I  PPSEF+H+EKGDALYAMELALSLEKLTNEKLL +HSVA+RNNDPQ A+F+ESEFL EQV++I KIA+YV+QLR+VGKGHG+WHFDQ LLH+ D
Sbjct:  120 NIALKGLAKFFKESSEEEREHAEQLIKYQNIRGGRVVLHPITSPPSEFEHSEKGDALYAMELALSLEKLTNEKLLHVHSVAERNNDPQXADFIESEFLYEQVKSIKKIAEYVAQLRLVGKGHGVWHFDQKLLHDED 255          
BLAST of CN185519 vs. ExPASy Swiss-Prot
Match: FRI3_VIGUN (Ferritin-3, chloroplastic OS=Vigna unguiculata PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.137e-46
Identity = 90/134 (67.16%), Postives = 106/134 (79.10%), Query Frame = -3
Query:  350 NIALRGLPXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHE 751
            NIAL+GL                  ++YQN+RGG+V LH I  PPSEF+H EKGDALYAMELALSLEKLTNEKLL +HSVADRNND Q+A+F+ESEFL EQVE+I KIA+YV+QLR+VGKGHG+WHFDQ LLH+
Sbjct:  123 NIALKGLAKFFKESSEEEREHAEKLIKYQNIRGGRVVLHPITSPPSEFEHPEKGDALYAMELALSLEKLTNEKLLYVHSVADRNNDAQLADFIESEFLNEQVESIKKIAEYVTQLRLVGKGHGVWHFDQRLLHD 256          
BLAST of CN185519 vs. ExPASy Swiss-Prot
Match: FRI1_BRANA (Ferritin-1, chloroplastic OS=Brassica napus GN=LSC30 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.192e-45
Identity = 90/133 (67.67%), Postives = 106/133 (79.70%), Query Frame = -3
Query:  353 NIALRGLPXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLH 751
            N+AL+GL                 FMEYQN RGG+V LH I+ P S+F+HAEKGDALYAMELALSLEKLTNEKLL+LH VA  NNDPQ+A+FVESEFLGEQ+EAI KI+ +++QLRMVGKGHG+WHFDQMLL+
Sbjct:  122 NVALKGLAKFFKESSDEEREHAEKFMEYQNQRGGRVTLHPIVSPISDFEHAEKGDALYAMELALSLEKLTNEKLLNLHRVASENNDPQLADFVESEFLGEQIEAIKKISDFITQLRMVGKGHGVWHFDQMLLN 254          
BLAST of CN185519 vs. ExPASy Swiss-Prot
Match: FRI_MALXI (Ferritin, chloroplastic OS=Malus xiaojinensis PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.936e-44
Identity = 87/132 (65.91%), Postives = 102/132 (77.27%), Query Frame = -3
Query:  356 NIALRGLPXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLL 751
            N+AL+G                   M+YQN RGG+V LH+I   PSEF+H EKGDALYAMELALSLEKL NEKLL++HSVADRNNDPQMA+F+ESEFL EQVE+I KI++YV+QLR VGKGHG+WHFDQ LL
Sbjct:  118 NVALKGFAKFFKESSEEEREHAEKLMKYQNTRGGRVVLHAIKNVPSEFEHVEKGDALYAMELALSLEKLVNEKLLNVHSVADRNNDPQMADFIESEFLSEQVESIKKISEYVAQLRRVGKGHGVWHFDQRLL 249          
BLAST of CN185519 vs. ExPASy Swiss-Prot
Match: FRI1_SOYBN (Ferritin-1, chloroplastic OS=Glycine max PE=1 SV=4)

HSP 1 Score: 178.333 bits (451), Expect = 3.834e-44
Identity = 87/132 (65.91%), Postives = 101/132 (76.52%), Query Frame = -3
Query:  356 NIALRGLPXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLL 751
            N+AL+G                   M+YQN RGG+V LH I   PSEF+H EKGDALYAMELALSLEKL NEKLL++HSVADRNNDPQMA+F+ESEFL EQVE+I KI++YV+QLR VGKGHG+WHFDQ LL
Sbjct:  118 NVALKGFAKFFKESSEEEREHAEKLMKYQNTRGGRVVLHPIKNAPSEFEHVEKGDALYAMELALSLEKLVNEKLLNVHSVADRNNDPQMADFIESEFLSEQVESIKKISEYVAQLRRVGKGHGVWHFDQRLL 249          
The following BLAST results are available for this feature:
BLAST of CN185519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
FRI3_SOYBN5.716e-4869.57Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRI2_VIGUN6.320e-4769.63Ferritin-2, chloroplastic OS=Vigna unguiculata GN=... [more]
FRI4_SOYBN1.078e-4668.35Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2[more]
FRI1_ARATH1.408e-4667.67Ferritin-1, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI_PHAVU2.402e-4665.94Ferritin, chloroplastic OS=Phaseolus vulgaris GN=P... [more]
FRI2_SOYBN2.402e-4666.18Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRI3_VIGUN3.137e-4667.16Ferritin-3, chloroplastic OS=Vigna unguiculata PE=... [more]
FRI1_BRANA1.192e-4567.67Ferritin-1, chloroplastic OS=Brassica napus GN=LSC... [more]
FRI_MALXI2.936e-4465.91Ferritin, chloroplastic OS=Malus xiaojinensis PE=3... [more]
FRI1_SOYBN3.834e-4465.91Ferritin-1, chloroplastic OS=Glycine max PE=1 SV=4[more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001H14_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001H14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185519 ID=CN185519; Name=CN185519; organism=Citrus sinensis; type=EST; length=753bp
CCCCCTTTTTTAGGCAGAAACAGAACTTTTATTGAACAACTTAATTATAT
TTATACCCTCAGAAGATGGATTTGGTGCTCTGCTTAAACTATTAGATCCC
TTCACACAGTCTGTTACTAAATAAAGAAAAAGCACCATCAAAAAGACTAT
CTAAATGCGACCACACTAATATGATAAAGCAAGGAGGCTATTGAGTATTA
ACTTTGTAGGACTTAACACTGTTTCAGCTTATTTTTTGTCAACACACTCA
ACCTCCTGTGGCAGAGATACTTCAGAACATTTGGCAGAAAAGAGTTGACT
AAAGCACAAAGAAATGTAACAATATGGTTCTTCATCATGCAGCATCACCC
TCGTGGAGAAGCATTTGATCGAAGTGCCATAATCCGTGGCCTTTCCCAAC
CATCCTCAGTTGAGAAACATATTTTGCGATCTTGTTAATTGCTTCAACCT
GCTCACCCAAAAATTCACTCTCGACAAACTCTGCCATTTGGGGATCATTG
TTTCTATCCGCCACACTGTGCAGGCTCAGAAGCTTCTCGTTTGTTAGCTT
CTCCAGGGACAATGCTAGTTCCATTGCATACAAGGCATCCCCTTTCTCCG
CATGATCAAACTCCGAAGGGGGCTGCATTATGGAGTGCAGTTTTACTTTT
CCACCGCGCAAGTTCTGATACTCCATAAACTTCTCAGCATGTTCCCTTTC
TTCTTCACTGGACTCCTTGAAAAATTTGGGCAGGCCTCTCAGAGCAATAT
TAT
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