CN185515

Overview
NameCN185515
Unique NameCN185515
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length367
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185515 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.452e-24
Identity = 47/66 (71.21%), Postives = 54/66 (81.82%), Query Frame = -3
Query:  108 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFFTPVVVMDVQAAEAEGNCKCGPTCACVNCTCG 305
            MSDTCGNCDCAD++QCVKKGSSY AD +ET+ S  T  VVMD  AAE +G CKCGP+C+C NCTCG
Sbjct:    1 MSDTCGNCDCADKTQCVKKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64          
BLAST of CN185515 vs. ExPASy Swiss-Prot
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.270e-18
Identity = 44/65 (67.69%), Postives = 48/65 (73.85%), Query Frame = -3
Query:  111 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFFTPVVVMDVQAAEAEGNCKCGPTCACVNCTC 305
            MSD CGNCDCAD SQCVKKG+S   D VETD S+   VV M V AAE+ G CKCG +C CVNCTC
Sbjct:    1 MSDKCGNCDCADSSQCVKKGNSI--DIVETDKSYIEDVV-MGVPAAESGGKCKCGTSCPCVNCTC 62          
BLAST of CN185515 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.659e-18
Identity = 38/64 (59.38%), Postives = 47/64 (73.44%), Query Frame = -3
Query:  105 TCGNCDCADRSQCVKKGSSYAADFVETDLSFFTPVVVMDVQAAEAEGNCKCGPTCACVNCTCGS 296
            TCGNCDC D+SQCVKKG+SY  D VET+ S+   V+V   +AAE +G CKCG  CAC +C CG+
Sbjct:    3 TCGNCDCVDKSQCVKKGNSYGIDIVETEKSYVDEVIVA-AEAAEHDGKCKCGAACACTDCKCGN 65          
BLAST of CN185515 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSJ (Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica GN=MT3A PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.105e-17
Identity = 37/66 (56.06%), Postives = 44/66 (66.67%), Query Frame = -3
Query:  108 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFFTPVVVMDVQAAEAEGNCKCGPTCACVNCTCG 305
            MSD CGNCDCAD+SQCVKKG+SY    VE + S F      +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of CN185515 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica GN=MT3A PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.105e-17
Identity = 37/66 (56.06%), Postives = 44/66 (66.67%), Query Frame = -3
Query:  108 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFFTPVVVMDVQAAEAEGNCKCGPTCACVNCTCG 305
            MSD CGNCDCAD+SQCVKKG+SY    VE + S F      +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of CN185515 vs. ExPASy Swiss-Prot
Match: MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.901e-16
Identity = 37/65 (56.92%), Postives = 44/65 (67.69%), Query Frame = -3
Query:  111 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFFTPVVVMDVQAAEAEGNCKCGPTCACVNCTC 305
            MS  C NCDC+D SQC KKG S+    VET+ +     V+MD  AAE  GNCKCGP+CACV+C C
Sbjct:    1 MSSKCSNCDCSDSSQCTKKGYSFDLVIVETE-NRSMDTVIMDAPAAENGGNCKCGPSCACVDCKC 64          
BLAST of CN185515 vs. ExPASy Swiss-Prot
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.007e-15
Identity = 38/66 (57.58%), Postives = 44/66 (66.67%), Query Frame = -3
Query:  108 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFFTPVVVMDVQAAEAEGNCKCGPTCACVNCTCG 305
            MS  C NCDCAD +QCVKKG+SY    VET+      V V D  AAE +G CKCG  C+CV+CTCG
Sbjct:    1 MSGKCDNCDCADSTQCVKKGNSYDLVIVETENRSMDTVFV-DAPAAEHDGKCKCGTGCSCVSCTCG 65          
BLAST of CN185515 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSJ (Metallothionein-like protein 3B OS=Oryza sativa subsp. japonica GN=MT3B PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.454e-14
Identity = 34/66 (51.52%), Postives = 42/66 (63.64%), Query Frame = -3
Query:  108 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFFTPVVVMDVQAAEAEGNCKCGPTCACVNCTCG 305
            MSD CGNCDCAD+SQCVKKG+SY    V+ + S F   +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
BLAST of CN185515 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSI (Metallothionein-like protein 3B OS=Oryza sativa subsp. indica GN=MT3B PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.524e-14
Identity = 33/66 (50.00%), Postives = 42/66 (63.64%), Query Frame = -3
Query:  108 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFFTPVVVMDVQAAEAEGNCKCGPTCACVNCTCG 305
            MSD CG+CDCAD+SQCVKKG+SY    V+ + S F   +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGHCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
The following BLAST results are available for this feature:
BLAST of CN185515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
MT3_CARPA3.452e-2471.21Metallothionein-like protein type 3 OS=Carica papa... [more]
MT3_ACTDE1.270e-1867.69Metallothionein-like protein type 3 OS=Actinidia d... [more]
MT3_MUSAC1.659e-1859.38Metallothionein-like protein type 3 OS=Musa acumin... [more]
MT3A_ORYSJ9.105e-1756.06Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3A_ORYSI9.105e-1756.06Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3_PRUAV5.901e-1656.92Metallothionein-like protein 1 OS=Prunus avium GN=... [more]
MT3_MALDO1.007e-1557.58Metallothionein-like protein type 3 OS=Malus domes... [more]
MT3B_ORYSJ1.454e-1451.52Metallothionein-like protein 3B OS=Oryza sativa su... [more]
MT3B_ORYSI5.524e-1450.00Metallothionein-like protein 3B OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0001H12_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185515 ID=CN185515; Name=CN185515; organism=Citrus sinensis; type=EST; length=367bp
TTTTTTTTTTTTTTTTTATCACCCTTACATTATTCTTAACCCCCCCCATT
TTAAGGCCCCCTTGCAGCTTCTTATTTTTTGCTGCCTTTTAAAGCTTATT
AGTGACTACCACAAGTGCAGTTCACACAAGCGCAGGTGGGGCCGCACTTG
CAGTTACCCTCAGCCTCAGCAGCCTGAACGTCCATGACAACAACGGGGGT
GAAAAAGCTCAAGTCAGTCTCGACGAAGTCAGCAGCATAGCTGCTTCCCT
TCTTCACACACTGGCTCCTGTCAGCGCAGTCGCAGTTGCCGCAGGTGTCC
GACATGTTGATTGAGCTTAAAACTTAGAAATTAAAACTGGAAATAGAGGG
CTCTTTATTGTACGCCT
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