CN185512
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185512 vs. ExPASy Swiss-Prot
Match: PSRP6_ARATH (50S ribosomal protein 6, chloroplastic OS=Arabidopsis thaliana GN=PSRP6 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.444e-16 Identity = 45/85 (52.94%), Postives = 54/85 (63.53%), Query Frame = 1 Query: 82 MSISSFFGSQIVVVP------NLSSKKLGVEGKCNVGLVIENSSRPQKKATAHHMKTRPRKTQPWDVNRKPTVYXXXXXXXXDWS 318 MS+S+ FG+ IV V KLG G +G+VIE SSRPQKK+TAHH KTRP+KTQPWD+ RKPTVY +WS Sbjct: 1 MSVSAIFGTGIVTVAASPVLRQFQVPKLGNGG--GLGMVIECSSRPQKKSTAHHRKTRPKKTQPWDIKRKPTVYAPLPPLPAEWS 83
BLAST of CN185512 vs. ExPASy Swiss-Prot
Match: PSRP6_SPIOL (50S ribosomal protein 6, chloroplastic OS=Spinacia oleracea GN=PSRP6 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.656e-14 Identity = 40/92 (43.48%), Postives = 56/92 (60.87%), Query Frame = 1 Query: 82 MSISSFFGSQIVVVPNL--------SSKKL--GVEGKCNVGLV-IENSSRPQKKATAHHMKTRPRKTQPWDVNRKPTVYXXXXXXXXDWSLV 324 MS+S+ FG+++V +P++ + KL G C G++ IE SSRPQKK TAHHMKTRP+KT WD+ R P VY +W++V Sbjct: 1 MSVSAIFGARVVTIPSVLRTSSVDGRTVKLQPSTGGSCGGGVITIECSSRPQKKGTAHHMKTRPKKTARWDIKRGPAVYPPLPPLPAEWTIV 92
BLAST of CN185512 vs. ExPASy Swiss-Prot
Match: PSRP6_PEA (50S ribosomal protein 6, chloroplastic OS=Pisum sativum GN=PSRP6 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.303e-13 Identity = 41/84 (48.81%), Postives = 54/84 (64.29%), Query Frame = 1 Query: 85 SISSFFGSQIVVVPNLSSKKLGVEGK----CNVGLVIENSSRPQKKATAHHMKTRPRKTQPWDVNRKPTVYXXXXXXXXDWSLV 324 S+SS FG + + PN S + + + C GL+IE SSRPQKK+TAHHMKTRPRK++ D NRKPTVY D+++V Sbjct: 3 SVSSIFGCGVSMAPNSSLRNKAIRTERRSACG-GLLIECSSRPQKKSTAHHMKTRPRKSRLSDRNRKPTVYAPLPPLPPDFTIV 85 The following BLAST results are available for this feature:
BLAST of CN185512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185512 ID=CN185512; Name=CN185512; organism=Citrus sinensis; type=EST; length=554bpback to top |