CN185508
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185508 vs. ExPASy Swiss-Prot
Match: VTI11_ARATH (Vesicle transport v-SNARE 11 OS=Arabidopsis thaliana GN=VTI11 PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 5.956e-28 Identity = 48/72 (66.67%), Postives = 62/72 (86.11%), Query Frame = 3 Query: 84 MSQVFEGYERQYCELSAGLSRKCTAASALDGELKKQKLSEIKTGLDDADALIRKMDLEARSSQPSVEGNASV 299 MS VF+GYERQYCELSA LS+KC++A +LDGE KKQKLSEIK+GL++A+ LIRKMDLEAR+ P+++ + V Sbjct: 1 MSDVFDGYERQYCELSASLSKKCSSAISLDGEQKKQKLSEIKSGLENAEVLIRKMDLEARTLPPNLKSSLLV 72 HSP 2 Score: 43.1282 bits (100), Expect = 5.956e-28 Identity = 22/37 (59.46%), Postives = 27/37 (72.97%), Query Frame = 1 Query: 280 LKAMLLSKLIEYKTDLNKLKNEVKRVTSCNVIQAARD 390 LK+ LL KL E+K+DLN K EVKR+TS + AARD Sbjct: 66 LKSSLLVKLREFKSDLNNFKTEVKRITSGQLNAAARD 102
BLAST of CN185508 vs. ExPASy Swiss-Prot
Match: VTI13_ARATH (Vesicle transport v-SNARE 13 OS=Arabidopsis thaliana GN=VTI13 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.314e-27 Identity = 47/72 (65.28%), Postives = 61/72 (84.72%), Query Frame = 3 Query: 84 MSQVFEGYERQYCELSAGLSRKCTAASALDGELKKQKLSEIKTGLDDADALIRKMDLEARSSQPSVEGNASV 299 MSQ FE YERQYCE+SA LS+KCT+A ALDGE KKQ LSEIK+G+++A+AL++KMDLEAR+ P+V+ + V Sbjct: 1 MSQGFERYERQYCEISANLSKKCTSAIALDGEQKKQNLSEIKSGVEEAEALVKKMDLEARNLPPNVKSSLLV 72 HSP 2 Score: 44.2838 bits (103), Expect = 1.314e-27 Identity = 22/37 (59.46%), Postives = 27/37 (72.97%), Query Frame = 1 Query: 280 LKAMLLSKLIEYKTDLNKLKNEVKRVTSCNVIQAARD 390 +K+ LL KL EYK+DLN K EVKR+TS N+ ARD Sbjct: 66 VKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARD 102
BLAST of CN185508 vs. ExPASy Swiss-Prot
Match: VTI12_ARATH (Vesicle transport v-SNARE 12 OS=Arabidopsis thaliana GN=VTI12 PE=1 SV=3) HSP 1 Score: 97.0561 bits (240), Expect = 3.033e-20 Identity = 51/87 (58.62%), Postives = 64/87 (73.56%), Query Frame = 3 Query: 84 MSQVFEGYERQYCELSAGLSRKCTAASAL-DGELKKQKLSEIKTGLDDADALIRKMDLEARSSQPSVEGNASV*VNRIQNRFEQVEK 341 MS VFEGYERQYCELS LSRKC +AS L +GE KK K++EIK+G+D+AD LIRKMDLEARS QPS + + ++ Q++K Sbjct: 1 MSDVFEGYERQYCELSTNLSRKCHSASVLSNGEEKKGKIAEIKSGIDEADVLIRKMDLEARSLQPSAKAVCLSKLREYKSDLNQLKK 87 The following BLAST results are available for this feature:
BLAST of CN185508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185508 ID=CN185508; Name=CN185508; organism=Citrus sinensis; type=EST; length=390bpback to top |