CN185483
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185483 vs. ExPASy Swiss-Prot
Match: ISPH_CYAA5 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain ATCC 51142) GN=ispH PE=3 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 1.048e-74 Identity = 135/215 (62.79%), Postives = 173/215 (80.47%), Query Frame = -3 Query: 161 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEVRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIKREEAL 805 SFAG Y++V N+KEA+YVCDYIL G K+ FLEKFK A S+GFDPD DL+++GIANQTTMLK ETE+IGKL E TM++K+G +NEHF+SFNTICDATQERQDAM +VEE+VD+++V+GG+NSSNT+HLQEI+ +GI SY IDS+KRI PGNKI +K + ++ KENWLP+G+I +G+TSGASTPDK VE V++++FE K L Sbjct: 193 SFAGTYLVVLNLKEAQYVCDYILNG------GNKDEFLEKFKNAHSEGFDPDKDLIRLGIANQTTMLKSETEQIGKLFETTMLKKYGPTELNEHFMSFNTICDATQERQDAMLNLVEEEVDVMVVIGGFNSSNTTHLQEISIEKGIDSYHIDSDKRILPGNKIEHKPLEKDIETKENWLPDGKIIVGVTSGASTPDKVVEAVIERIFEEKNAGVL 401
BLAST of CN185483 vs. ExPASy Swiss-Prot
Match: ISPH_THEEB (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Thermosynechococcus elongatus (strain BP-1) GN=ispH PE=3 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 3.050e-74 Identity = 138/210 (65.71%), Postives = 167/210 (79.52%), Query Frame = -3 Query: 176 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEVRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIK 805 SFAG Y+IV N++EA YVCDYIL G + AF+ KF KA S GFDPD DLV+VGIANQTTMLKGETE+IGKL E+TM++K+G + +NEHF+SFNTICDATQERQDAM +V+E +DL++V+GG+NSSNT+HLQEIA GIPSY IDS RIGPGN+I +K +H ENWLP+ ITIGITSGASTPDK VEEVL K+F ++ Sbjct: 193 SFAGTYLIVLNLEEARYVCDYILHG------GDRAAFMAKFAKACSPGFDPDRDLVRVGIANQTTMLKGETEQIGKLFERTMIQKYGPDRLNEHFMSFNTICDATQERQDAMLSLVKEPLDLMVVIGGYNSSNTTHLQEIAIEHGIPSYHIDSADRIGPGNRIEHKPLHQNPTVAENWLPDRPITIGITSGASTPDKVVEEVLNKIFALR 396
BLAST of CN185483 vs. ExPASy Swiss-Prot
Match: ISPH_CYAP4 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ispH PE=3 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 1.159e-73 Identity = 134/210 (63.81%), Postives = 168/210 (80.00%), Query Frame = -3 Query: 176 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEVRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIK 805 S+A Y+IV ++KEAEYVC+YIL G +E FL KF+ A S FDPD DLV+VGIANQTTMLKGETE+IGKL E+T+MRK+G + +N+HF+SFNTICDATQERQDAM+K+VE +DL++V+GG+NSSNT+HLQEI+ R IPSY IDS RIGPGN++ +K +H L KENWLP G I +GITSGASTPDK V +VL+K+F +K Sbjct: 194 SYAATYLIVLDLKEAEYVCNYILNG------GDREEFLHKFRHAYSPDFDPDRDLVRVGIANQTTMLKGETEQIGKLFERTLMRKYGPDQINQHFLSFNTICDATQERQDAMFKLVEYPLDLMVVIGGFNSSNTTHLQEISIEREIPSYHIDSADRIGPGNRVEHKPLHRPLEIKENWLPEGPIVVGITSGASTPDKVVSDVLEKIFALK 397
BLAST of CN185483 vs. ExPASy Swiss-Prot
Match: ISPH_ANAVT (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ispH PE=3 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 3.156e-71 Identity = 131/215 (60.93%), Postives = 170/215 (79.07%), Query Frame = -3 Query: 161 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEVRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIKREEAL 805 SFAGKY+IV N+KEA+YV DYIL G +E FL+KF KA S GFDPD DL +VGIANQTTMLKGETE+IGKL E TM++K+G +N+HF SFNTICDATQERQDAM ++V+E +DL++V+GG+NSSNT+ LQ+I++ RG+PSY ID +RI N I ++ ++GELV ENWLP G+I +G+TSGASTPDK VE+V++K+F +K A+ Sbjct: 193 SFAGKYLIVLNLKEAQYVADYILHGR------NREEFLQKFAKACSAGFDPDKDLERVGIANQTTMLKGETEQIGKLFEHTMLQKYGPVELNQHFQSFNTICDATQERQDAMLELVQENLDLMIVIGGFNSSNTTQLQQISQERGLPSYHIDVVERIKSVNSIEHRQLNGELVTTENWLPAGKIVVGVTSGASTPDKVVEDVIEKIFALKATTAV 401
BLAST of CN185483 vs. ExPASy Swiss-Prot
Match: ISPH_ANASP (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Anabaena sp. (strain PCC 7120) GN=ispH PE=3 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 5.384e-71 Identity = 131/215 (60.93%), Postives = 170/215 (79.07%), Query Frame = -3 Query: 161 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEVRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIKREEAL 805 SFAGKY+IV N+KEA+YV DYIL G +E FL+KF KA S GFDPD DL +VGIANQTTMLKGETE+IGKL E TM++K+G +N+HF SFNTICDATQERQDAM ++V+E +DL++V+GG+NSSNT+ LQ+I++ RG+PSY ID +RI N I ++ ++GELV ENWLP G+I +G+TSGASTPDK VE+V++K+F +K A+ Sbjct: 193 SFAGKYLIVLNLKEAQYVADYILHG------GNREEFLQKFAKACSAGFDPDRDLERVGIANQTTMLKGETEQIGKLFEHTMLQKYGPVELNQHFQSFNTICDATQERQDAMLELVQENLDLMIVIGGFNSSNTTQLQQISQERGLPSYHIDVVERIKSINSIEHRQLNGELVTTENWLPAGKIVVGVTSGASTPDKVVEDVIEKIFALKATAAV 401
BLAST of CN185483 vs. ExPASy Swiss-Prot
Match: ISPH_ACAM1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Acaryochloris marina (strain MBIC 11017) GN=ispH PE=3 SV=1) HSP 1 Score: 267.314 bits (682), Expect = 7.031e-71 Identity = 128/216 (59.26%), Postives = 170/216 (78.70%), Query Frame = -3 Query: 164 SFAGKYIIVKNMKEAEYVCDYILG-GELNGSSSTKEA-FLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEVRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIKREEA 805 SFAG Y+++ N++EAEYV DYIL G+ + A F+ KF A S GFDP+ DL +VGIANQTTMLKGETE+IGKL E+T+MRK+G VNEHF+SFNTICDATQERQDA++++V+E +DL++V+GG+NSSNT+HLQEI+ + IPSY IDS RIGPGN++ +K ++ +L +NWLPNG + IG+TSGASTPDK V ++++K+F IK A Sbjct: 194 SFAGTYLVLLNLEEAEYVADYILNPGDTPSEREQRRADFMAKFANAHSPGFDPETDLERVGIANQTTMLKGETEQIGKLFERTVMRKYGPAQVNEHFLSFNTICDATQERQDAIFQLVDEPLDLMVVIGGFNSSNTTHLQEISIDKNIPSYHIDSVDRIGPGNRVEHKPLNADLTVTDNWLPNGPLAIGVTSGASTPDKVVSDIVEKIFSIKSASA 409
BLAST of CN185483 vs. ExPASy Swiss-Prot
Match: ISPH_SYNP6 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ispH PE=3 SV=1) HSP 1 Score: 266.159 bits (679), Expect = 1.566e-70 Identity = 125/211 (59.24%), Postives = 171/211 (81.04%), Query Frame = -3 Query: 173 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEVRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIKR 805 SFA Y++V N+++A+YVCDYIL G ++ F+ +F KA S GFDPD DL ++GIANQTTMLK ETE IGKL E+T+++K+G + +N+HF++FNTICDATQERQDAM+++VEE +DLI+V+GG+NSSNT+HLQEIA R IPS+ ID+ +RIGPGN+I +K +H +L E WLP G +TIGITSGASTPDK VE+V++++F+++R Sbjct: 193 SFAETYLVVLNLEQAQYVCDYILNG------GDRDEFMTRFGKACSAGFDPDRDLERIGIANQTTMLKSETEAIGKLFERTLLKKYGPQALNDHFLAFNTICDATQERQDAMFQLVEEPLDLIVVIGGFNSSNTTHLQEIAIERQIPSFHIDAAERIGPGNRIEHKPLHTDLTTTEPWLPAGPLTIGITSGASTPDKVVEDVIERLFDLQR 397
BLAST of CN185483 vs. ExPASy Swiss-Prot
Match: ISPH_SYNE7 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus elongatus (strain PCC 7942) GN=ispH PE=3 SV=1) HSP 1 Score: 266.159 bits (679), Expect = 1.566e-70 Identity = 125/211 (59.24%), Postives = 171/211 (81.04%), Query Frame = -3 Query: 173 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEVRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIKR 805 SFA Y++V N+++A+YVCDYIL G ++ F+ +F KA S GFDPD DL ++GIANQTTMLK ETE IGKL E+T+++K+G + +N+HF++FNTICDATQERQDAM+++VEE +DLI+V+GG+NSSNT+HLQEIA R IPS+ ID+ +RIGPGN+I +K +H +L E WLP G +TIGITSGASTPDK VE+V++++F+++R Sbjct: 193 SFAETYLVVLNLEQAQYVCDYILNG------GDRDEFMTRFGKACSAGFDPDRDLERIGIANQTTMLKSETEAIGKLFERTLLKKYGPQALNDHFLAFNTICDATQERQDAMFQLVEEPLDLIVVIGGFNSSNTTHLQEIAIERQIPSFHIDAAERIGPGNRIEHKPLHTDLTTTEPWLPAGPLTIGITSGASTPDKVVEDVIERLFDLQR 397
BLAST of CN185483 vs. ExPASy Swiss-Prot
Match: ISPH_CYAP7 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain PCC 7424) GN=ispH PE=3 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 1.326e-69 Identity = 132/215 (61.40%), Postives = 167/215 (77.67%), Query Frame = -3 Query: 161 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEVRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIKREEAL 805 SFAG Y++V NM++A+YVC+YIL G K+ FL KFKKA S+GFDPD DL +VGIANQTTMLK ETEEIGKL E TM++K+G ++N HF+SFNTICDATQERQDAM +V+EK+DL++V+GG+NSSNT+HLQEI+ GI SY IDS RI N I +K + +L KENWLP+G+I +G+TSGASTPD VE+VL+K+F IK A+ Sbjct: 193 SFAGTYLVVLNMEQAKYVCNYILNG------GDKQEFLAKFKKAYSEGFDPDTDLERVGIANQTTMLKSETEEIGKLFEHTMLKKYGPLDLNNHFMSFNTICDATQERQDAMLDLVKEKLDLMVVIGGFNSSNTTHLQEISIHHGIVSYHIDSAARIDLNNHIEHKPLGKDLEVKENWLPDGKIVVGVTSGASTPDIVVEQVLQKIFAIKSAVAM 401
BLAST of CN185483 vs. ExPASy Swiss-Prot
Match: ISPH_CYAP8 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain PCC 8801) GN=ispH PE=3 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 6.581e-69 Identity = 131/213 (61.50%), Postives = 162/213 (76.06%), Query Frame = -3 Query: 167 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEVRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIKREE 805 SFAG Y++V N+++A YVCDYIL G KE FL KFK A S+GFDPD DL KVGIANQTTMLK ETE+IGKL E TM++K+G +N+HF+SFNTICDATQERQDAM ++V+EK+DL++V+GG+NSSNT+HLQEI +GI SY ID+ RI P N I +K + +L KENWLP G I +GITSGASTPD VE V++K+F K E Sbjct: 193 SFAGTYLVVLNLEQATYVCDYILKG------GNKEEFLAKFKNAYSEGFDPDTDLEKVGIANQTTMLKSETEQIGKLFEGTMLKKYGPAVINDHFMSFNTICDATQERQDAMLELVKEKLDLMVVIGGFNSSNTTHLQEIPIYQGITSYHIDNATRIKPNNCIEHKPLGKDLEIKENWLPEGSIVVGITSGASTPDIIVEAVIEKIFSAKELE 399 The following BLAST results are available for this feature:
BLAST of CN185483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185483 ID=CN185483; Name=CN185483; organism=Citrus sinensis; type=EST; length=807bpback to top |