CN185437

Overview
NameCN185437
Unique NameCN185437
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185437 vs. ExPASy Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 3.768e-51
Identity = 101/153 (66.01%), Postives = 116/153 (75.82%), Query Frame = 2
Query:   44 MSMIPSFFGNRRSSVFDPFSLDVWDFSSSSQFPQ----ETSAFVNTRVDWKETPEAHVFKADLPGXXXXXXXXXXXXXRVLKISGQRKIEKEDKNDTWYRVERSSGAFSRRFRLPENVEVDQIKASIDCGVLTLIIPKAEAKKSNVRAIQISG 490
            MS+IPSFFG RRSSVFDPFSLDVWD      FP     E SAFV+TRVDWKETPEAHVFKAD+PG             RVL+ISG+R +EKEDKNDTW+RVERSSG   RRFRLPEN +VDQ+KAS++ GVLT+ +PK E KK +V+AI ISG
Sbjct:    1 MSLIPSFFGGRRSSVFDPFSLDVWDPFKDFPFPSSLSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIDISG 153          
BLAST of CN185437 vs. ExPASy Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.096e-50
Identity = 99/153 (64.71%), Postives = 117/153 (76.47%), Query Frame = 2
Query:   44 MSMIPSFFGNRRSSVFDPFSLDVWDFSSSSQFPQ----ETSAFVNTRVDWKETPEAHVFKADLPGXXXXXXXXXXXXXRVLKISGQRKIEKEDKNDTWYRVERSSGAFSRRFRLPENVEVDQIKASIDCGVLTLIIPKAEAKKSNVRAIQISG 490
            MS+IPS FG RRS+VFDPFSLDVWD      FP     E SAFVNTRVDWKETPEAHVF+AD+PG             RVL+ISG+R +EKEDKNDTW+RVERSSG F RRFRLPEN +V+Q+KAS++ GVLT+ +PK E KK +V+AI+ISG
Sbjct:    1 MSLIPSIFGGRRSNVFDPFSLDVWDPFKDFHFPTSLSAENSAFVNTRVDWKETPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 153          
BLAST of CN185437 vs. ExPASy Swiss-Prot
Match: HS17B_ARATH (17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana GN=HSP17.6B PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.432e-50
Identity = 100/153 (65.36%), Postives = 121/153 (79.08%), Query Frame = 2
Query:   44 MSMIPSFFGN-RRSSVFDPFSLDVWD---FSSSSQFPQETSAFVNTRVDWKETPEAHVFKADLPGXXXXXXXXXXXXXRVLKISGQRKIEKEDKNDTWYRVERSSGAFSRRFRLPENVEVDQIKASIDCGVLTLIIPKAEAKKSNVRAIQISG 490
            MSMIPSFF N RRS++FDPFSLDVWD     +SS   +E SA VN RVDW+ETPEAHVFKADLPG              VLKISG+R +EKEDKNDTW+RVERSSG F+RRFRLPENV++DQ+KA+++ GVLT+ +PKAE KK++V++IQISG
Sbjct:    1 MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSSSLSRENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153          
BLAST of CN185437 vs. ExPASy Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.870e-50
Identity = 98/158 (62.03%), Postives = 118/158 (74.68%), Query Frame = 2
Query:   44 MSMIPSFFGNRRSSVFDPFSLDVWD---------FSSSSQFPQETSAFVNTRVDWKETPEAHVFKADLPGXXXXXXXXXXXXXRVLKISGQRKIEKEDKNDTWYRVERSSGAFSRRFRLPENVEVDQIKASIDCGVLTLIIPKAEAKKSNVRAIQISG 490
            MS+IPSFFG RRS+VFDPFSLDVWD          + S+ FP+E SAFV+TRVDWKETPEAHVFKADLPG             RVL+ISG+R +EKEDKND W+R+ERSSG F RRFRLPEN ++DQ+KA+++ GVLT+ +PK E KK  V+ I ISG
Sbjct:    1 MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNSALSASFPRENSAFVSTRVDWKETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158          
BLAST of CN185437 vs. ExPASy Swiss-Prot
Match: HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.870e-50
Identity = 100/158 (63.29%), Postives = 121/158 (76.58%), Query Frame = 2
Query:   44 MSMIPSFFGNRRSSVFDPFSLDVWD------FSSSS---QFPQETSAFVNTRVDWKETPEAHVFKADLPGXXXXXXXXXXXXXRVLKISGQRKIEKEDKNDTWYRVERSSGAFSRRFRLPENVEVDQIKASIDCGVLTLIIPKAEAKKSNVRAIQISG 490
            MS+IPSFF  RRS+VFDPFSLDVWD      FS+SS    FP+E  AFV+TRVDWKETPEAHVFKADLPG             RVL+ISG+R +EKEDKND W+RVERSSG F RRFRLPEN ++D++KAS++ GVLT+ +PK E KK+ V++I+ISG
Sbjct:    1 MSLIPSFFSGRRSNVFDPFSLDVWDPLKDFPFSNSSPSASFPRENPAFVSTRVDWKETPEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFRLPENAKMDKVKASMENGVLTVTVPKEEIKKAEVKSIEISG 158          
BLAST of CN185437 vs. ExPASy Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.190e-50
Identity = 99/161 (61.49%), Postives = 123/161 (76.40%), Query Frame = 2
Query:   44 MSMIPSFFGNRRSSVFDPFSLDVWD----------FSSSS--QFPQETSAFVNTRVDWKETPEAHVFKADLPGXXXXXXXXXXXXXRVLKISGQRKIEKEDKNDTWYRVERSSGAFSRRFRLPENVEVDQIKASIDCGVLTLIIPKAEAKKSNVRAIQISG 490
            MS+IP+FFG RR++VFDPFSLDVWD           SS+S  +F +E SAFV+TRVDWKETPEAHVFKAD+PG             +VL+ISG+R +EKEDKNDTW+RVERSSG F RRFRLPEN +V+Q+KAS++ GVLT+ +PK E KK +V+AI+ISG
Sbjct:    1 MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 161          
BLAST of CN185437 vs. ExPASy Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.212e-49
Identity = 96/154 (62.34%), Postives = 118/154 (76.62%), Query Frame = 2
Query:   44 MSMIPSFFGNRRSSVFDPFSLDVWD-----FSSSSQFPQETSAFVNTRVDWKETPEAHVFKADLPGXXXXXXXXXXXXXRVLKISGQRKIEKEDKNDTWYRVERSSGAFSRRFRLPENVEVDQIKASIDCGVLTLIIPKAEAKKSNVRAIQISG 490
            MS+IP FFG RRS+VFDPFSLD+WD        +S    E SAFV+TRVDWKETPEAHVFKAD+PG             RVL+ISG+R +EKEDKNDTW+RVERSSG F+RRFRLPEN +V+++KAS++ GVLT+ +PK E KK +V+AI+ISG
Sbjct:    1 MSLIPGFFGGRRSNVFDPFSLDMWDPFKDFHVPTSSVSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRFRLPENAKVNEVKASMENGVLTVTVPKEEVKKPDVKAIEISG 154          
BLAST of CN185437 vs. ExPASy Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 7.857e-49
Identity = 96/157 (61.15%), Postives = 118/157 (75.16%), Query Frame = 2
Query:   44 MSMIPSFFGNRRSSVFDPFSLDVWD--------FSSSSQFPQETSAFVNTRVDWKETPEAHVFKADLPGXXXXXXXXXXXXXRVLKISGQRKIEKEDKNDTWYRVERSSGAFSRRFRLPENVEVDQIKASIDCGVLTLIIPKAEAKKSNVRAIQISG 490
            MS+IPSFFG RRS+VFDPFSLDVWD         SS+S+F +ET+AFVNT +DWKETP+AHVFKADLPG             +VL+ISG+R  EKE+KND W+RVERSSG F RRFRLPEN +VD++KA++  GV+T+ +PK E KK  V+AI ISG
Sbjct:    1 MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTSSASEFGKETAAFVNTHIDWKETPQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDISG 157          
BLAST of CN185437 vs. ExPASy Swiss-Prot
Match: HSP15_SOYBN (17.6 kDa class I heat shock protein OS=Glycine max GN=HSP17.6-L PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 5.631e-47
Identity = 94/154 (61.04%), Postives = 113/154 (73.38%), Query Frame = 2
Query:   44 MSMIPSFFGNRRSSVFDPFSLDVWD-----FSSSSQFPQETSAFVNTRVDWKETPEAHVFKADLPGXXXXXXXXXXXXXRVLKISGQRKIEKEDKNDTWYRVERSSGAFSRRFRLPENVEVDQIKASIDCGVLTLIIPKAEAKKSNVRAIQISG 490
            MS+IPS FG  RS+VFDPFSLD+WD        +S    E SAFVNTRVDWKET EAHV KAD+PG             RVL+ISG+R +EKEDKNDTW+RV+RSSG F RRFRLPEN +V+Q+KA ++ GVLT+ IPK E KKS+V+ I+ISG
Sbjct:    1 MSLIPSIFGGPRSNVFDPFSLDMWDPFKDFHVPTSSVSAENSAFVNTRVDWKETQEAHVLKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVDRSSGKFMRRFRLPENAKVEQVKACMENGVLTVTIPKEEVKKSDVKPIEISG 154          
BLAST of CN185437 vs. ExPASy Swiss-Prot
Match: HS178_ARATH (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.140e-46
Identity = 96/157 (61.15%), Postives = 115/157 (73.25%), Query Frame = 2
Query:   44 MSMIPSFFGNRR--SSVFDPFSLDVWDFSSSSQFPQ----ETSAFVNTRVDWKETPEAHVFKADLPGXXXXXXXXXXXXXRVLKISGQRKIEKEDKNDTWYRVERSSGAFSRRFRLPENVEVDQIKASIDCGVLTLIIPKAE--AKKSNVRAIQISG 490
            MS+IPSFFGN R  +S+FDPFSLDVWD     QFP     ETSA  N RVDWKET EAHVFKADLPG              VLKISG+R +EKE+K DTW+RVERSSG FSR+F+LPENV++DQ+KAS++ GVLT+ +PK E   KK+ V++I ISG
Sbjct:    1 MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSGETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157          
The following BLAST results are available for this feature:
BLAST of CN185437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
HSP11_SOYBN3.768e-5166.0117.3 kDa class I heat shock protein OS=Glycine max... [more]
HSP13_SOYBN1.096e-5064.7117.5 kDa class I heat shock protein OS=Glycine max... [more]
HS17B_ARATH1.432e-5065.3617.6 kDa class I heat shock protein 2 OS=Arabidops... [more]
HSP12_MEDSA1.870e-5062.0318.2 kDa class I heat shock protein OS=Medicago sa... [more]
HSP11_PEA1.870e-5063.2918.1 kDa class I heat shock protein OS=Pisum sativ... [more]
HSP16_SOYBN3.190e-5061.4918.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP14_SOYBN1.212e-4962.3417.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP11_DAUCA7.857e-4961.1517.8 kDa class I heat shock protein OS=Daucus caro... [more]
HSP15_SOYBN5.631e-4761.0417.6 kDa class I heat shock protein OS=Glycine max... [more]
HS178_ARATH2.140e-4661.1517.8 kDa class I heat shock protein OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001F08_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185437 ID=CN185437; Name=CN185437; organism=Citrus sinensis; type=EST; length=613bp
ATGGCGTACTCGTGGGTTGTCAGCTTCTAAATTCTAATCCAAAATGTCGA
TGATTCCAAGCTTCTTCGGGAACCGCCGCAGCAGTGTCTTCGATCCATTC
TCTCTTGACGTCTGGGATTTCTCTTCCTCATCTCAGTTCCCGCAAGAGAC
CTCGGCTTTCGTCAACACCCGCGTCGACTGGAAGGAAACCCCGGAAGCCC
ACGTGTTCAAGGCCGATCTGCCGGGGGTGAAGAAAGAGGAAGTGAAGGTC
GAGGTCGACGATGACAGGGTGCTTAAGATAAGCGGGCAGAGGAAGATCGA
GAAGGAAGACAAGAACGACACGTGGTATCGCGTGGAGCGCAGCAGTGGAG
CGTTCTCGCGGAGGTTCAGGCTACCGGAGAATGTGGAGGTGGACCAGATT
AAGGCCTCAATAGACTGTGGTGTGCTCACTCTTATCATTCCTAAAGCGGA
GGCCAAGAAATCCAATGTCAGGGCTATTCAAATTTCTGGCTGAATTCTCC
TCTCTCCTGATAATAAGGCTTTGTTTGTTAATAATGATAATAAGGTCGTC
TCCTGGTTTTAGGATTTAATGTGTGAATAAAATCTTATATTGCAAAGTAA
AGTGTCTTTTTTT
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