CN185423 | Citrus Genome Database

Overview


Name	CN185423
Unique Name	CN185423
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	623

Libraries


Library Name	Type
Washington Navel Orange Stored Fruit Pulp cDNA Library	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
CN185423_ssr10	microsatellite	CN185423_ssr10:10..30.	BLAST: Citrus ESTs to Prunus persica proteins V1
CN185423_ssr81	microsatellite	CN185423_ssr81:81..92.	BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7970	contig	Csv1_Contig7970:90..712.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

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BLAST of CN185423 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 1.249e-57
Identity = 105/161 (65.22%), Postives = 131/161 (81.37%), Query Frame = 2

Query:  128 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPF 610
            N+EGDAL AL+ SL+DP+ VLQSWD TLV PCTWFH+TCN DN VTR+DLGN+NLSG+LV +LG+L +LQYLELY NNI GTIP +LGNL  L+SLDLY NN+SG IP +L +LK L FLRLN+N L+G+IPR L  + +L+V+D+S+N L G IP +G F
Sbjct:   26 NAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNSVTRVDLGNANLSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLYLNNLSGPIPSTLGRLKKLRFLRLNNNSLSGEIPRSLTAVLTLQVLDLSNNPLTGDIPVNGSF 186

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BLAST of CN185423 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 1.381e-56
Identity = 105/161 (65.22%), Postives = 127/161 (78.88%), Query Frame = 2

Query:  128 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPF 610
            N EGDAL+ LR +L DP+NVLQSWDPTLVNPCTWFH+TCN +N V R+DLGN+ LSG LVPELG L++LQYLELY NNI G IP  LGNL +L+SLDLY N+ SG IP SL KL  L FLRLN+N LTG IP  L  I++L+V+D+S+N L G++P +G F
Sbjct:   27 NLEGDALHTLRVTLVDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNAELSGHLVPELGVLKNLQYLELYSNNITGPIPSNLGNLTNLVSLDLYLNSFSGPIPESLGKLSKLRFLRLNNNSLTGSIPMSLTNITTLQVLDLSNNRLSGSVPDNGSF 187

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BLAST of CN185423 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 2.355e-56
Identity = 102/161 (63.35%), Postives = 131/161 (81.37%), Query Frame = 2

Query:  128 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPF 610
            N EGDAL++LR +L DP+NVLQSWDPTLVNPCTWFH+TCN +N V R+DLGN++LSG+LVP+LG+L++LQYLELY NNI G +P +LGNL +L+SLDLY N+ +G IP SL KL  L FLRLN+N LTG IP  L  I +L+V+D+S+N L G++P +G F
Sbjct:   30 NMEGDALHSLRANLVDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNADLSGQLVPQLGQLKNLQYLELYSNNITGPVPSDLGNLTNLVSLDLYLNSFTGPIPDSLGKLFKLRFLRLNNNSLTGPIPMSLTNIMTLQVLDLSNNRLSGSVPDNGSF 190

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BLAST of CN185423 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 2.695e-52
Identity = 104/164 (63.41%), Postives = 126/164 (76.83%), Query Frame = 2

Query:  128 NSEGDALYALRRSLSDPD---NVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPF 610
            N+EGDAL  L+ SLS  D   NVLQSWD TLV PCTWFH+TCN +N+VTR+DLGN+ LSG+LVPELG+L +LQYLELY NNI G IP ELG+L  L+SLDLY N+ISG IP SL KL  L FLRLN+N L+G+IP  L  +  L+V+D+S+N L G IP +G F
Sbjct:   30 NAEGDALTQLKNSLSSGDPANNVLQSWDATLVTPCTWFHVTCNPENKVTRVDLGNAKLSGKLVPELGQLLNLQYLELYSNNITGEIPEELGDLVELVSLDLYANSISGPIPSSLGKLGKLRFLRLNNNSLSGEIPMTLTSV-QLQVLDISNNRLSGDIPVNGSF 192

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BLAST of CN185423 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 1.998e-47
Identity = 97/160 (60.62%), Postives = 119/160 (74.38%), Query Frame = 2

Query:  140 DALYALRRSLSDPD---NVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPF 610
            DAL ALR SLS  D   N+LQSW+ T V PC+WFH+TCN +N VTRLDLG++NLSG LVP+L +L +LQYLEL+ NNI G IP ELG+L  L+SLDL+ NNISG IP SL KL  L FLRL +N L+G+IPR L  +  L V+D+S+N L G IP +G F
Sbjct:   29 DALIALRSSLSSGDHTNNILQSWNATHVTPCSWFHVTCNTENSVTRLDLGSANLSGELVPQLAQLPNLQYLELFNNNITGEIPEELGDLMELVSLDLFANNISGPIPSSLGKLGKLRFLRLYNNSLSGEIPRSLTAL-PLDVLDISNNRLSGDIPVNGSF 187

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BLAST of CN185423 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.045e-32
Identity = 73/158 (46.20%), Postives = 97/158 (61.39%), Query Frame = 2

Query:  128 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 601
            +++GDAL+ALR SL    N L  W+   VNPCTW  + C+  N VT L L + N SG L   +G LE+L+ L L  N I G IP + GNL SL SLDL +N ++G+IP ++  LK L FL L+ N+L G IP  L G+ +L  + + SN L G IP S
Sbjct:   28 DAQGDALFALRISLRALPNQLSDWNQNQVNPCTWSQVICDDKNFVTSLTLSDMNFSGTLSSRVGILENLKTLTLKGNGITGEIPEDFGNLTSLTSLDLEDNQLTGRIPSTIGNLKKLQFLTLSRNKLNGTIPESLTGLPNLLNLLLDSNSLSGQIPQS 185

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BLAST of CN185423 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 7.141e-29
Identity = 66/156 (42.31%), Postives = 95/156 (60.90%), Query Frame = 2

Query:  128 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 595
            N E +AL  ++  L DP  V ++WD   V+PC+W  I+C+ DN V  L   + +LSG L   +G L +L+ + L  NNI G IP E+ +L  L +LDL NN  SG+IP S+ +L +L +LRLN+N L+G  P  L  I  L  +D+S N+L G +P
Sbjct:   32 NPEVEALINIKNELHDPHGVFKNWDEFSVDPCSWTMISCSSDNLVIGLGAPSQSLSGTLSGSIGNLTNLRQVSLQNNNISGKIPPEICSLPKLQTLDLSNNRFSGEIPGSVNQLSNLQYLRLNNNSLSGPFPASLSQIPHLSFLDLSYNNLRGPVP 187

[Close]

BLAST of CN185423 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.629e-28
Identity = 65/156 (41.67%), Postives = 90/156 (57.69%), Query Frame = 2

Query:  128 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 595
            N E  AL +++  + D   VL  WD   V+PCTW  + C+ +  V  L++ +  LSG L   +G+L HL  L L  N + G IP ELG L  L +LDL  N  SG+IP SL  L  L +LRL+ N L+GQ+P  + G+S L  +D+S N+L G  P
Sbjct:   37 NYEVAALMSVKNKMKDEKEVLSGWDINSVDPCTWNMVGCSSEGFVVSLEMASKGLSGILSTSIGELTHLHTLLLQNNQLTGPIPSELGQLSELETLDLSGNRFSGEIPASLGFLTHLNYLRLSRNLLSGQVPHLVAGLSGLSFLDLSFNNLSGPTP 192

[Close]

BLAST of CN185423 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 3.918e-27
Identity = 63/158 (39.87%), Postives = 97/158 (61.39%), Query Frame = 2

Query:  128 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 601
            +S+G AL +L+R      ++  SWDP    PC+W+ ITC+ DNRV  + + ++ L+   +P+L  L  LQ+L L   N+ G IP   G L  L  LDL +N++SG IP  L +L +L FL LN N+L+G IP ++  + +L+V+ +  N L G+IP+S
Sbjct:   28 SSDGQALLSLKRP---SPSLFSSWDPQDQTPCSWYGITCSADNRVISVSIPDTFLNLSSIPDLSSLSSLQFLNLSSTNLSGPIPPSFGKLTHLRLLDLSSNSLSGPIPSELGRLSTLQFLILNANKLSGSIPSQISNLFALQVLCLQDNLLNGSIPSS 182

HSP 2 Score: 87.4261 bits (215), Expect = 6.270e-17
Identity = 51/112 (45.54%), Postives = 64/112 (57.14%), Query Frame = 2

Query:  260 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 595
            +T L    S LSG +    G L +LQ L LY   I GTIP +LG    L +L L+ N ++G IP  L KL+ +  L L  N L+G IP E+   SSL V DVS+NDL G IP
Sbjct:  214 LTTLGFAASGLSGSIPSTFGNLVNLQTLALYDTEISGTIPPQLGLCSELRNLYLHMNKLTGSIPKELGKLQKITSLLLWGNSLSGVIPPEISNCSSLVVFDVSANDLTGDIP 325

HSP 3 Score: 86.6557 bits (213), Expect = 1.070e-16
Identity = 51/136 (37.50%), Postives = 74/136 (54.41%), Query Frame = 2

Query:  260 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNN------------------------IQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 595
            + RL +G + LSG++  E+G+L++L +L+LY N+                        I G IP +LGNL +L  LDL  N+ +G IP S   L  L  L LN+N LTGQIP+ +  +  L ++D+S N L G IP
Sbjct:  454 LVRLRVGENQLSGQIPKEIGELQNLVFLDLYMNHFSGGLPYEISNITVLELLDVHNNYITGDIPAQLGNLVNLEQLDLSRNSFTGNIPLSFGNLSYLNKLILNNNLLTGQIPKSIKNLQKLTLLDLSYNSLSGEIP 589

HSP 4 Score: 85.1149 bits (209), Expect = 3.112e-16
Identity = 47/115 (40.87%), Postives = 69/115 (60.00%), Query Frame = 2

Query:  254 NRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPT 598
            + +  L L  + L+G +  ELGKL+ +  L L+ N++ G IP E+ N  SL+  D+  N+++G IP  L KL  L  L+L+DN  TGQIP EL   SSL  + +  N L G+IP+
Sbjct:  260 SELRNLYLHMNKLTGSIPKELGKLQKITSLLLWGNSLSGVIPPEISNCSSLVVFDVSANDLTGDIPGDLGKLVWLEQLQLSDNMFTGQIPWELSNCSSLIALQLDKNKLSGSIPS 374

HSP 5 Score: 83.9593 bits (206), Expect = 6.933e-16
Identity = 45/110 (40.91%), Postives = 71/110 (64.55%), Query Frame = 2

Query:  269 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKV-VDVSSNDLCGTIP 595
            LD+ N+ ++G +  +LG L +L+ L+L +N+  G IP+  GNL  L  L L NN ++G+IP S+  L+ L  L L+ N L+G+IP+EL  ++SL + +D+S N   G IP
Sbjct:  505 LDVHNNYITGDIPAQLGNLVNLEQLDLSRNSFTGNIPLSFGNLSYLNKLILNNNLLTGQIPKSIKNLQKLTLLDLSYNSLSGEIPQELGQVTSLTINLDLSYNTFTGNIP 614

HSP 6 Score: 82.4185 bits (202), Expect = 2.017e-15
Identity = 46/112 (41.07%), Postives = 66/112 (58.93%), Query Frame = 2

Query:  266 RLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 601
            +L L ++  +G++  EL     L  L+L KN + G+IP ++GNLKSL S  L+ N+ISG IP S      LV L L+ N+LTG+IP EL  +  L  + +  N L G +P S
Sbjct:  336 QLQLSDNMFTGQIPWELSNCSSLIALQLDKNKLSGSIPSQIGNLKSLQSFFLWENSISGTIPSSFGNCTDLVALDLSRNKLTGRIPEELFSLKRLSKLLLLGNSLSGGLPKS 447

HSP 7 Score: 81.6481 bits (200), Expect = 3.441e-15
Identity = 49/136 (36.03%), Postives = 69/136 (50.74%), Query Frame = 2

Query:  188 LQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 595
            LQ  D        W    C+    +  L L  + LSG +  ++G L+ LQ   L++N+I GTIP   GN   L++LDL  N ++G+IP  L  LK L  L L  N L+G +P+ +    SL  + V  N L G IP
Sbjct:  337 LQLSDNMFTGQIPWELSNCSS---LIALQLDKNKLSGSIPSQIGNLKSLQSFFLWENSISGTIPSSFGNCTDLVALDLSRNKLTGRIPEELFSLKRLSKLLLLGNSLSGGLPKSVAKCQSLVRLRVGENQLSGQIP 469

HSP 8 Score: 80.8777 bits (198), Expect = 5.869e-15
Identity = 42/115 (36.52%), Postives = 71/115 (61.74%), Query Frame = 2

Query:  257 RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 601
            R+++L L  ++LSG L   + K + L  L + +N + G IP E+G L++L+ LDLY N+ SG +P  ++ +  L  L +++N +TG IP +L  + +L+ +D+S N   G IP S
Sbjct:  429 RLSKLLLLGNSLSGGLPKSVAKCQSLVRLRVGENQLSGQIPKEIGELQNLVFLDLYMNHFSGGLPYEISNITVLELLDVHNNYITGDIPAQLGNLVNLEQLDLSRNSFTGNIPLS 543

HSP 9 Score: 78.5666 bits (192), Expect = 2.913e-14
Identity = 41/109 (37.61%), Postives = 67/109 (61.47%), Query Frame = 2

Query:  269 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 595
            LDL  + L+GR+  EL  L+ L  L L  N++ G +P  +   +SL+ L +  N +SG+IP  + +L++LVFL L  N  +G +P E+  I+ L+++DV +N + G IP
Sbjct:  409 LDLSRNKLTGRIPEELFSLKRLSKLLLLGNSLSGGLPKSVAKCQSLVRLRVGENQLSGQIPKEIGELQNLVFLDLYMNHFSGGLPYEISNITVLELLDVHNNYITGDIP 517

HSP 10 Score: 77.7962 bits (190), Expect = 4.968e-14
Identity = 44/108 (40.74%), Postives = 61/108 (56.48%), Query Frame = 2

Query:  272 DLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 595
            D+  ++L+G +  +LGKL  L+ L+L  N   G IP EL N  SLI+L L  N +SG IP  +  LKSL    L +N ++G IP      + L  +D+S N L G IP
Sbjct:  314 DVSANDLTGDIPGDLGKLVWLEQLQLSDNMFTGQIPWELSNCSSLIALQLDKNKLSGSIPSQIGNLKSLQSFFLWENSISGTIPSSFGNCTDLVALDLSRNKLTGRIP 421

HSP 11 Score: 75.8702 bits (185), Expect = 1.888e-13
Identity = 41/115 (35.65%), Postives = 68/115 (59.13%), Query Frame = 2

Query:  257 RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 601
            ++T L L  ++LSG + PE+     L   ++  N++ G IP +LG L  L  L L +N  +G+IP  L+   SL+ L+L+ N+L+G IP ++  + SL+   +  N + GTIP+S
Sbjct:  285 KITSLLLWGNSLSGVIPPEISNCSSLVVFDVSANDLTGDIPGDLGKLVWLEQLQLSDNMFTGQIPWELSNCSSLIALQLDKNKLSGSIPSQIGNLKSLQSFFLWENSISGTIPSS 399

HSP 12 Score: 72.7886 bits (177), Expect = 1.598e-12
Identity = 43/114 (37.72%), Postives = 64/114 (56.14%), Query Frame = 2

Query:  266 RLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSL-VFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSG 604
            +LDL  ++ +G +    G L +L  L L  N + G IP  + NL+ L  LDL  N++SG+IP  L ++ SL + L L+ N  TG IP     ++ L+ +D+SSN L G I   G
Sbjct:  528 QLDLSRNSFTGNIPLSFGNLSYLNKLILNNNLLTGQIPKSIKNLQKLTLLDLSYNSLSGEIPQELGQVTSLTINLDLSYNTFTGNIPETFSDLTQLQSLDLSSNSLHGDIKVLG 641

[Close]

BLAST of CN185423 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.540e-26
Identity = 69/161 (42.86%), Postives = 91/161 (56.52%), Query Frame = 2

Query:  128 NSEGDALYALRRSLSD-PDNVLQSW--DPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 601
            NS+G  L +L + L   P  V  +W  + +   PC WF ITC+    V  L+   S +SG+L PE+G+L+ LQ L+L  NN  GTIP  LGN   L +LDL  N  S KIP +L  LK L  L L  N LTG++P  L  I  L+V+ +  N+L G IP S
Sbjct:   30 NSDGLTLLSLLKHLDRVPPQVTSTWKINASEATPCNWFGITCDDSKNVASLNFTRSRVSGQLGPEIGELKSLQILDLSTNNFSGTIPSTLGNCTKLATLDLSENGFSDKIPDTLDSLKRLEVLYLYINFLTGELPESLFRIPKLQVLYLDYNNLTGPIPQS 190

HSP 2 Score: 83.9593 bits (206), Expect = 6.933e-16
Identity = 50/147 (34.01%), Postives = 78/147 (53.06%), Query Frame = 2

Query:  161 RSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 601
            R L+   N+L    P  +  C            + R  L  +NLSG L+PE  +   L +L+   NN +G IP  LG+ K+L S++L  N  +G+IPP L  L++L ++ L+ N L G +P +L    SL+  DV  N L G++P++
Sbjct:  462 RILNLGSNLLHGTIPASIGHC----------KTIRRFILRENNLSG-LLPEFSQDHSLSFLDFNSNNFEGPIPGSLGSCKNLSSINLSRNRFTGQIPPQLGNLQNLGYMNLSRNLLEGSLPAQLSNCVSLERFDVGFNSLNGSVPSN 597

HSP 3 Score: 83.1889 bits (204), Expect = 1.183e-15
Identity = 46/114 (40.35%), Postives = 70/114 (61.40%), Query Frame = 2

Query:  260 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 601
            +T L +GN++L G +       ++L  L+L  N  +G +P  LGN  SL +L + + N+SG IP SL  LK+L  L L++NRL+G IP EL   SSL ++ ++ N L G IP++
Sbjct:  245 LTTLFVGNNSLQGPVRFGSPNCKNLLTLDLSYNEFEGGVPPALGNCSSLDALVIVSGNLSGTIPSSLGMLKNLTILNLSENRLSGSIPAELGNCSSLNLLKLNDNQLVGGIPSA 358

HSP 4 Score: 81.6481 bits (200), Expect = 3.441e-15
Identity = 44/112 (39.29%), Postives = 64/112 (57.14%), Query Frame = 2

Query:  260 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 595
            +T L+L  + LSG +  ELG    L  L+L  N + G IP  LG L+ L SL+L+ N  SG+IP  + K +SL  L +  N LTG++P E+  +  LK+  + +N   G IP
Sbjct:  317 LTILNLSENRLSGSIPAELGNCSSLNLLKLNDNQLVGGIPSALGKLRKLESLELFENRFSGEIPIEIWKSQSLTQLLVYQNNLTGELPVEMTEMKKLKIATLFNNSFYGAIP 428

HSP 5 Score: 80.4925 bits (197), Expect = 7.665e-15
Identity = 45/105 (42.86%), Postives = 63/105 (60.00%), Query Frame = 2

Query:  281 NSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 595
            + NLSG +   LG L++L  L L +N + G+IP ELGN  SL  L L +N + G IP +L KL+ L  L L +NR +G+IP E+    SL  + V  N+L G +P
Sbjct:  300 SGNLSGTIPSSLGMLKNLTILNLSENRLSGSIPAELGNCSSLNLLKLNDNQLVGGIPSALGKLRKLESLELFENRFSGEIPIEIWKSQSLTQLLVYQNNLTGELP 404

HSP 6 Score: 79.7221 bits (195), Expect = 1.307e-14
Identity = 44/109 (40.37%), Postives = 58/109 (53.21%), Query Frame = 2

Query:  269 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 595
            LDL  +   G + P LG    L  L +   N+ GTIP  LG LK+L  L+L  N +SG IP  L    SL  L+LNDN+L G IP  L  +  L+ +++  N   G IP
Sbjct:  272 LDLSYNEFEGGVPPALGNCSSLDALVIVSGNLSGTIPSSLGMLKNLTILNLSENRLSGSIPAELGNCSSLNLLKLNDNQLVGGIPSALGKLRKLESLELFENRFSGEIP 380

HSP 7 Score: 78.5666 bits (192), Expect = 2.913e-14
Identity = 36/114 (31.58%), Postives = 70/114 (61.40%), Query Frame = 2

Query:  260 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 601
            ++ ++L  +  +G++ P+LG L++L Y+ L +N ++G++P +L N  SL   D+  N+++G +P + +  K L  L L++NR +G IP+ L  +  L  + ++ N   G IP+S
Sbjct:  532 LSSINLSRNRFTGQIPPQLGNLQNLGYMNLSRNLLEGSLPAQLSNCVSLERFDVGFNSLNGSVPSNFSNWKGLTTLVLSENRFSGGIPQFLPELKKLSTLQIARNAFGGEIPSS 645

HSP 8 Score: 77.7962 bits (190), Expect = 4.968e-14
Identity = 43/115 (37.39%), Postives = 66/115 (57.39%), Query Frame = 2

Query:  257 RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 601
            ++  L+L  +  SG +  E+ K + L  L +Y+NN+ G +PVE+  +K L    L+NN+  G IPP L    SL  +    N+LTG+IP  L     L+++++ SN L GTIP S
Sbjct:  364 KLESLELFENRFSGEIPIEIWKSQSLTQLLVYQNNLTGELPVEMTEMKKLKIATLFNNSFYGAIPPGLGVNSSLEEVDFIGNKLTGEIPPNLCHGRKLRILNLGSNLLHGTIPAS 478

HSP 9 Score: 77.411 bits (189), Expect = 6.489e-14
Identity = 43/109 (39.45%), Postives = 62/109 (56.88%), Query Frame = 2

Query:  269 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 595
            L L ++ L G +   LGKL  L+ LEL++N   G IP+E+   +SL  L +Y NN++G++P  + ++K L    L +N   G IP  L   SSL+ VD   N L G IP
Sbjct:  344 LKLNDNQLVGGIPSALGKLRKLESLELFENRFSGEIPIEIWKSQSLTQLLVYQNNLTGELPVEMTEMKKLKIATLFNNSFYGAIPPGLGVNSSLEEVDFIGNKLTGEIP 452

HSP 10 Score: 68.1662 bits (165), Expect = 3.937e-11
Identity = 43/113 (38.05%), Postives = 64/113 (56.64%), Query Frame = 2

Query:  260 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLI-SLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 595
            +T L L  +  SG +   L +L+ L  L++ +N   G IP  +G ++ LI  LDL  N ++G+IP  L  L  L  L +++N LTG +   L G++SL  VDVS+N   G IP
Sbjct:  604 LTTLVLSENRFSGGIPQFLPELKKLSTLQIARNAFGGEIPSSIGLIEDLIYDLDLSGNGLTGEIPAKLGDLIKLTRLNISNNNLTGSL-SVLKGLTSLLHVDVSNNQFTGPIP 715

The following BLAST results are available for this feature:

BLAST of CN185423 vs. ExPASy Swiss-Prot

BLAST of CN185423 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114


Match Name	E-value	Identity	Description
BAK1_ARATH	1.249e-57	65.22	BRASSINOSTEROID INSENSITIVE 1-associated receptor ...	[more]
SERK1_ARATH	1.381e-56	65.22	Somatic embryogenesis receptor kinase 1 OS=Arabido...	[more]
SERK2_ARATH	2.355e-56	63.35	Somatic embryogenesis receptor kinase 2 OS=Arabido...	[more]
SERK4_ARATH	2.695e-52	63.41	Somatic embryogenesis receptor kinase 4 OS=Arabido...	[more]
SERK5_ARATH	1.998e-47	60.63	Somatic embryogenesis receptor kinase 5 OS=Arabido...	[more]
Y5129_ARATH	4.045e-32	46.20	Probable LRR receptor-like serine/threonine-protei...	[more]
Y2239_ARATH	7.141e-29	42.31	Probable LRR receptor-like serine/threonine-protei...	[more]
Y5457_ARATH	4.629e-28	41.67	Probable LRR receptor-like serine/threonine-protei...	[more]
Y1341_ARATH	3.918e-27	39.87	Probable LRR receptor-like serine/threonine-protei...	[more]
PEPR1_ARATH	2.540e-26	42.86	Leucine-rich repeat receptor-like protein kinase P...	[more]

Pages

Properties


Property Name	Value
Genbank description	UCRCS05_0001F01_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001F01, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CN185423 ID=CN185423; Name=CN185423; organism=Citrus sinensis; type=EST; length=623bp
GAGAGCCATGGCGGCGGCGGCGGCGGCGGCGGAAGCGGCAGTGCAGTGGT
TGAGTGTGTGTATAACGTTCAGCATAAGCCTAATAATAATAATAGGGAGC
AGCAGCTTGGTGGCGGTGGCGAGTGGAAACTCGGAAGGGGACGCGCTGTA
CGCGCTCAGGAGAAGCTTATCAGATCCCGATAACGTGCTTCAGAGCTGGG
ATCCAACTCTCGTCAATCCCTGCACTTGGTTTCACATAACCTGTAATCAG
GACAACCGCGTTACTCGACTGGATTTGGGTAATTCAAATCTATCCGGCCG
TCTCGTCCCTGAACTGGGCAAGCTCGAGCATTTGCAATACCTGGAACTTT
ACAAAAACAACATCCAAGGAACTATCCCTGTCGAGCTCGGTAACTTGAAG
AGCCTCATCAGCTTGGACTTGTATAATAACAACATCTCGGGGAAAATCCC
TCCTTCCTTGGCTAAATTGAAATCTCTTGTTTTTTTGCGGCTTAACGATA
ATCGGCTAACTGGACAAATTCCCAGGGAACTTGTTGGAATTTCAAGTCTC
AAAGTTGTGGATGTTTCAAGCAATGATCTGTGTGGAACAATTCCTACAAG
CGGACCATTTGAACACATCCCAC