CN185413
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185413 vs. ExPASy Swiss-Prot
Match: TMEDA_DICDI (Transmembrane emp24 domain-containing protein A OS=Dictyostelium discoideum GN=empA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.006e-18 Identity = 60/194 (30.93%), Postives = 97/194 (50.00%), Query Frame = 1 Query: 106 ILALLMSLIGRLSSLSVTVNDVECVYEYVIYEGDTVAGNFVVVDHDIFWSTDHPGIDFTVTSPAGNVVHTVKGTSGDKFEFKAPRSGMYKFCFNNPYS--TPETVSFYIHVGHIPNEHNLAKDEHLDPINVKIAELREALESVVSEQKYLRARDTRHRHTNESTRKRLLGYTIGEYVLLAMASALQVLYIRKLF 681 +L + + I S V+ EC+YE + + A F V+ IDFT+ SP +V++ + S ++ +G+Y FCF+N S T +TVSF + VG +AK + L PI I L + + +V +EQ Y + R+ HR+T EST R+L +++ E +L S Q+ Y+R+ F Sbjct: 13 LLCIASNSIVESFSFKVSAKVEECIYEEIGVDLSFTA-MFQVIQGGF------NDIDFTIISPDKRIVYSGQRESEGTKTLRSSFAGVYSFCFSNKMSSLTDKTVSFILSVGESSPIREIAKKKDLTPIERSIMTLSDGVIAVKNEQNYFKMREAAHRNTAESTNSRVLWWSVFEAFVLIALSIWQIYYLRRFF 199
BLAST of CN185413 vs. ExPASy Swiss-Prot
Match: TMED2_MOUSE (Transmembrane emp24 domain-containing protein 2 OS=Mus musculus GN=Tmed2 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.958e-17 Identity = 57/196 (29.08%), Postives = 96/196 (48.98%), Query Frame = 1 Query: 106 ILALLMSLIGRLSS--LSVTVNDVECVYEYVIYEGDTVAGNFVVVDHDIFWSTDHPGIDFTVTSPAGNVVHTVKGTSGDKFEFKAPRSGMYKFCFNNPYS--TPETVSFYIHVGHIPNEHNLAKDEHLDPINVKIAELREALESVVSEQKYLRARDTRHRHTNESTRKRLLGYTIGEYVLLAMASALQVLYIRKLF 681 +LALL +L+ S +S+ + EC +E V G + F V + ID +T P ++ S K+ F A G YKFCF+N S TP+ V F I +G P ++ + H + + I EL A+ +V EQ+Y+ R+ HR N++T R++ ++ E ++L + Q+ Y+++ F Sbjct: 7 LLALLAALLATASGYFVSIDAHAEECFFERVT-SGTKMGLIFEVAEGGFL------DIDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFF 195
BLAST of CN185413 vs. ExPASy Swiss-Prot
Match: TMED2_HUMAN (Transmembrane emp24 domain-containing protein 2 OS=Homo sapiens GN=TMED2 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.699e-16 Identity = 56/196 (28.57%), Postives = 96/196 (48.98%), Query Frame = 1 Query: 106 ILALLMSLIGRLSS--LSVTVNDVECVYEYVIYEGDTVAGNFVVVDHDIFWSTDHPGIDFTVTSPAGNVVHTVKGTSGDKFEFKAPRSGMYKFCFNNPYS--TPETVSFYIHVGHIPNEHNLAKDEHLDPINVKIAELREALESVVSEQKYLRARDTRHRHTNESTRKRLLGYTIGEYVLLAMASALQVLYIRKLF 681 +L LL +L+ +S +S+ + EC +E V G + F V + ID +T P ++ S K+ F A G YKFCF+N S TP+ V F I +G P ++ + H + + I EL A+ +V EQ+Y+ R+ HR N++T R++ ++ E ++L + Q+ Y+++ F Sbjct: 7 LLVLLAALLATVSGYFVSIDAHAEECFFERVT-SGTKMGLIFEVAEGGFL------DIDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFF 195
BLAST of CN185413 vs. ExPASy Swiss-Prot
Match: TMED2_CRIGR (Transmembrane emp24 domain-containing protein 2 (Fragment) OS=Cricetulus griseus GN=TMED2 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.218e-16 Identity = 56/196 (28.57%), Postives = 95/196 (48.47%), Query Frame = 1 Query: 106 ILALLMSLIGRLSS--LSVTVNDVECVYEYVIYEGDTVAGNFVVVDHDIFWSTDHPGIDFTVTSPAGNVVHTVKGTSGDKFEFKAPRSGMYKFCFNNPYS--TPETVSFYIHVGHIPNEHNLAKDEHLDPINVKIAELREALESVVSEQKYLRARDTRHRHTNESTRKRLLGYTIGEYVLLAMASALQVLYIRKLF 681 +L LL +L+ S +S+ + EC +E V G + F V + ID +T P ++ S K+ F A G YKFCF+N S TP+ V F I +G P ++ + H + + I EL A+ +V EQ+Y+ R+ HR N++T R++ ++ E ++L + Q+ Y+++ F Sbjct: 2 VLVLLAALLATASGYFVSIDAHAEECFFERVT-SGTKMGLIFEVAEGGFL------DIDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFF 190
BLAST of CN185413 vs. ExPASy Swiss-Prot
Match: TMED2_RAT (Transmembrane emp24 domain-containing protein 2 OS=Rattus norvegicus GN=Tmed2 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.897e-16 Identity = 56/196 (28.57%), Postives = 95/196 (48.47%), Query Frame = 1 Query: 106 ILALLMSLIGRLSS--LSVTVNDVECVYEYVIYEGDTVAGNFVVVDHDIFWSTDHPGIDFTVTSPAGNVVHTVKGTSGDKFEFKAPRSGMYKFCFNNPYS--TPETVSFYIHVGHIPNEHNLAKDEHLDPINVKIAELREALESVVSEQKYLRARDTRHRHTNESTRKRLLGYTIGEYVLLAMASALQVLYIRKLF 681 +L LL +L+ S +S+ + EC +E V G + F V + ID +T P ++ S K+ F A G YKFCF+N S TP+ V F I +G P ++ + H + + I EL A+ +V EQ+Y+ R+ HR N++T R++ ++ E ++L + Q+ Y+++ F Sbjct: 7 LLVLLAALLATASGYFVSIDAHAEECFFERVT-SGTKMGLIFEVAEGGFL------DIDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFF 195
BLAST of CN185413 vs. ExPASy Swiss-Prot
Match: TMEDB_DICDI (Transmembrane emp24 domain-containing protein B OS=Dictyostelium discoideum GN=empB PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.464e-15 Identity = 62/199 (31.16%), Postives = 98/199 (49.25%), Query Frame = 1 Query: 109 LALLMSLIGRLSSLSVTVN--DVECVYEYVIYEGDTVAGNFVVVDHDIFWSTDHPGIDFTVTSPAGNVV----HTVKGTSGDKFEFKAPRSGMYKFCFNNPYS--TPETVSFYIHVGHIPNEHNLAKDEHLDPINVKIAELREALESVVSEQKYLRARDTRHRHTNESTRKRLLGYTIGEYVLLAMASALQVLYIRKLF 681 + + + LIG S+L++ V EC Y + I G T + V+ + I+ +T P GN + H G K F A SG YK CFNN S T + V+F +AK + + P++ + ++ L+SV+ EQK LR R+ +R T+EST R++ +TI E ++L + Q+ Y+RK F Sbjct: 12 ILVTLFLIGSSSALTLQVEPKSQECFYNF-IESGKTSLLLYQVIRGGLL------DINVKLTDPKGNTIFERLHFDTQMKG-KQSFTAGESGAYKVCFNNEMSRFTAKVVTF-TWASEEEGVKEVAKGDSITPMDQSVQKIERVLQSVIHEQKKLRYREQANRDTSESTNARVVWWTIAEVIVLVVMGVGQIWYLRKWF 201
BLAST of CN185413 vs. ExPASy Swiss-Prot
Match: TMED_NEMVE (Transmembrane emp24 domain-containing protein OS=Nematostella vectensis GN=v1g194562 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.041e-14 Identity = 38/139 (27.34%), Postives = 75/139 (53.96%), Query Frame = 1 Query: 271 IDFTVTSPAGNVVHTVKGTSGDKFEFKAPRSGMYKFCFNNPYST--PETVSFYIHVGHIPNEHNLAKDEHLDPINVKIAELREALESVVSEQKYLRARDTRHRHTNESTRKRLLGYTIGEYVLLAMASALQVLYIRKLF 681 ID + P V+++ + + K+ F A G Y +CF+N ST P+ + F + +G P + + + D ++ +++L EA+ V EQ+Y+ R+ HR N++T R++ ++ E ++L + QV Y+++ F Sbjct: 59 IDVKIIGPDQKVIYSGERETSGKYTFAAHMDGTYNYCFSNKMSTMTPKVLKFSMDIGEAPKDTSKEDNAGHDKLSEMVSQLSEAMTGVKHEQEYMEVRERIHRSINDNTNSRVVWWSFFESLVLVAMTLGQVYYLKRFF 197
BLAST of CN185413 vs. ExPASy Swiss-Prot
Match: TMED7_HUMAN (Transmembrane emp24 domain-containing protein 7 OS=Homo sapiens GN=TMED7 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 7.890e-14 Identity = 59/203 (29.06%), Postives = 98/203 (48.28%), Query Frame = 1 Query: 106 ILALLMSLIGRLSSLSVTV----NDVECVYEYVIYEGDTVAGNFVVVDHDIFWSTDHPGIDFTVTSPAGNVVHTVKGTSGDKFEFKAPRSGMYKFCFNNPYS--TPETVSFYIHVGH----IPNEHNLAKDEHLDPINVKIAELREALESVVSEQKYLRARDTRHRHTNESTRKRLLGYTIGEYVLLAMASALQVLYIRKLFS 684 +LALL+ + G + +T N +C YE + +G F V+ + H +D + P G V++ D F F A ++G YKFCF+N +S T +TV F VG P+E+ ++ ++ V I EAL+SV+ Q + R R+ + R E R+ +++GE ++L + S QV ++ FS Sbjct: 21 LLALLLLVPGPGGASEITFELPDNAKQCFYEDIA-QGTKCTLEFQVI------TGGHYDVDCRLEDPDGKVLYKEMKKQYDSFTFTASKNGTYKFCFSNEFSTFTHKTVYFDFQVGEDPPLFPSENRVSALTQMESACVSI---HEALKSVIDYQTHFRLREAQGRSRAEDLNTRVAYWSVGEALILLVVSIGQVFLLKSFFS 213
BLAST of CN185413 vs. ExPASy Swiss-Prot
Match: ERP2_YEAST (Protein ERP2 OS=Saccharomyces cerevisiae GN=ERP2 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.723e-13 Identity = 60/200 (30.00%), Postives = 96/200 (48.00%), Query Frame = 1 Query: 103 MILALLMSLIGRLSSLSVTVN----DVECVYEYVIYEGDTVAGNFVVVDHDIFWSTDHPGIDFTVTSPAGNVVHTVKGTSGDKFEFKAPRSGMYKFCFNNPYSTP-ETVSFYIHVGHIPNEHNLAKDEHLDPI-NVKIAELREALESVVSEQKYLRARDTRHRHTNESTRKRLLGYTIGEYVLLAMASALQVLYIRKLFS 684 +ILAL+ S+ S V ++ EC+Y ++ E D++A + V+ F IDF +T+P G+V+ + K F K+ G Y FCF+N Y T + V + + + A + D I N + E+ L + YLRAR+ R+ T ST RL +I +++A+ S QVL I+ LF+ Sbjct: 15 LILALVNSVAASSSYAPVAISLPAFSKECLYYDMVTEDDSLAVGYQVLTGGNF------EIDFDITAPDGSVITSEKQKKYSDFLLKSFGVGKYTFCFSNNYGTALKKVEITLEKEKTLTDEHEADVNNDDIIANNAVEEIDRNLNKITKTLNYLRAREWRNMSTVNSTESRLTWLSILIIIIIAVISIAQVLLIQFLFT 208
BLAST of CN185413 vs. ExPASy Swiss-Prot
Match: TMED3_MOUSE (Transmembrane emp24 domain-containing protein 3 OS=Mus musculus GN=Tmed3 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.943e-12 Identity = 59/208 (28.37%), Postives = 101/208 (48.56%), Query Frame = 1 Query: 103 MILALLMSLIGR---LSSLSVTV----NDVECVYEYVIYEGDTVAGNFVVVDHDIFWSTDHPGIDFTVTSPAGNVVHTVKGTSGDKFEFKAPRSGMYKFCFNNPYST--PETVSFYIHVGH----IPNEHNLAKDEHLDPINVKIAELREALESVVSEQKYLRARDTRHRHTNESTRKRLLGYTIGEYVLLAMASALQVLYIRKLFSK 687 M+L LL+ L+ R L S +T N +C +E V +G + ++ V+ + H +D V P GNV++ D F +K G+Y+FCF+N +ST +TV F VG +P+ N + L + + EAL++V+ Q + R R+ + R E R+ +++GE + L + S QVL ++ F++ Sbjct: 13 MLLQLLLLLLLRAEPLRSAELTFELPDNAKQCFHEEV-EQGVKFSLDYQVI------TGGHYDVDCYVEDPRGNVIYRETKKQYDSFTYKTEAKGVYRFCFSNEFSTFSHKTVYFDFQVGDEPPILPDMGN--RVTALTQMESACVTIHEALKTVIDSQTHYRLREAQDRARAEDLNSRVSYWSVGETIALFVVSFSQVLLLKSFFTE 211 The following BLAST results are available for this feature:
BLAST of CN185413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185413 ID=CN185413; Name=CN185413; organism=Citrus sinensis; type=EST; length=687bpback to top |