CN185402

Overview
NameCN185402
Unique NameCN185402
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12567 contig Csv1_Contig12567:64..724. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185402 vs. ExPASy Swiss-Prot
Match: THI4_CITSI (Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 1.199e-101
Identity = 188/195 (96.41%), Postives = 190/195 (97.44%), Query Frame = 2
Query:   74 MAAMASTAFAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLNGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNALAAE 658
            MAAMASTAFAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTD    GAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWL GQLFSAMVVRKPAHIFLDELGIDYDEQD+YVVIKHAALFTSTIMSKLLARPNVKLFNA+AAE
Sbjct:    1 MAAMASTAFAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAE 195          
BLAST of CN185402 vs. ExPASy Swiss-Prot
Match: THI4_ALNGL (Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 2.605e-72
Identity = 134/173 (77.46%), Postives = 152/173 (87.86%), Query Frame = 2
Query:  140 SSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLNGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNALAAE 658
            SSF+G P++PS +R+QP K+    ++S+S + SPPYDL  F FDPIKESIVSREMTRRYM DMITYADTD    GAGS+GL C YELSKNP++Q+AIIEQSVSPGGGAWL GQLFS MVVRKPAH+FLDELGI+YDEQD+YVVIKHAALFTSTIMSKLLARPNVKLFNA+AAE
Sbjct:   20 SSFYGTPLAPSSIRVQPTKAGAKPSISMSGAPSPPYDLKAFTFDPIKESIVSREMTRRYMMDMITYADTDVVVVGAGSSGLVC-YELSKNPSVQVAIIEQSVSPGGGAWLGGQLFSGMVVRKPAHLFLDELGIEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAE 191          
BLAST of CN185402 vs. ExPASy Swiss-Prot
Match: THI4_ARATH (Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 4.913e-71
Identity = 140/196 (71.43%), Postives = 164/196 (83.67%), Query Frame = 2
Query:   74 MAAMASTAFAPSVSSTT-NKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLNGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNALAAE 658
            MAA+AST    S+SST   +LFDSSFHG+ +S + + +      +P + S+ A+ +  YDLN F FDPIKESIVSREMTRRYMTDMITYA+TD    GAGSAGLS AYE+SKNPN+Q+AIIEQSVSPGGGAWL GQLFSAM+VRKPAH+FLDE+G+ YDEQD+YVV+KHAALFTSTIMSKLLARPNVKLFNA+AAE
Sbjct:    1 MAAIASTL---SLSSTKPQRLFDSSFHGSAISAAPISI----GLKPRSFSVRATTAG-YDLNAFTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAE 188          
BLAST of CN185402 vs. ExPASy Swiss-Prot
Match: THI41_MAIZE (Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.296e-63
Identity = 129/193 (66.84%), Postives = 148/193 (76.68%), Query Frame = 2
Query:  113 SSTTNKLFDSSFHGAPMSPSLLRLQPIK----------SSRPNNLSISASAS-PPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLNGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNALAAE 658
            ++  + L  SSF G+ + P+  R  P             + P   S+S S+S PPYDL +F+F PIKESIVSREMTRRYMTDMITYADTD    GAGSAGLSCAYELSK+P + IAI+EQSVSPGGGAWL GQLFSAMVVRKPAH+FLDELG+ YDE + YVVIKHAALFTST+MS LLARPNVKLFNA+A E
Sbjct:    3 TAAASSLLKSSFAGSRL-PAATRTTPASLVVATGPRGAGAGPICASMSMSSSNPPYDLTSFRFSPIKESIVSREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKDPAVSIAIVEQSVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGVAYDEAEDYVVIKHAALFTSTVMSLLLARPNVKLFNAVAVE 194          
BLAST of CN185402 vs. ExPASy Swiss-Prot
Match: THI42_MAIZE (Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 1.692e-63
Identity = 126/191 (65.97%), Postives = 147/191 (76.96%), Query Frame = 2
Query:  113 SSTTNKLFDSSFHGAPMSPSLLRLQ---------PIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLNGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNALAAE 658
            ++  + L  SSF G+ + PS  R           P     P   SIS S +PPYDL +F+F PIKESIVSREMTRRYMTDMIT+ADTD    GAGSAGLSCAYELSK+P + +AI+EQSVSPGGGAWL GQLFSAMVVR+PAH+FLDELG+ YDE + YVV+KHAALFTST+MS+LLARPNVKLFNA+A E
Sbjct:    3 TTAASSLLKSSFAGSRL-PSATRTTTPSSVAVATPRAGGGPIRASIS-SPNPPYDLTSFRFSPIKESIVSREMTRRYMTDMITHADTDVVIVGAGSAGLSCAYELSKDPTVSVAIVEQSVSPGGGAWLGGQLFSAMVVRRPAHLFLDELGVGYDEAEDYVVVKHAALFTSTVMSRLLARPNVKLFNAVAVE 191          
BLAST of CN185402 vs. ExPASy Swiss-Prot
Match: THI2_SCHPO (Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 1.759e-44
Identity = 89/146 (60.96%), Postives = 116/146 (79.45%), Query Frame = 2
Query:  227 ASASPPYDLN-TFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYEL-SKNPNIQIAIIEQSVSPGGGAWLNGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNALAAE 658
            + A P Y L+ +F F PI+ES VSR MTRRY +D+  YA++D    GAGSAGL+ AY + ++ P+++IAIIE SV+PGGGAWL GQLFSAMVVRKPA +FL+E+G+ Y+++  YVV+KHAALFTST+M++ LA PNVKLFNA A E
Sbjct:   37 SKAYPTYSLDESFSFAPIRESTVSRAMTRRYFSDLDKYAESDIVIVGAGSAGLTAAYYIGTRRPDLKIAIIEASVAPGGGAWLGGQLFSAMVVRKPADLFLNEIGVPYEDEGDYVVVKHAALFTSTVMARTLALPNVKLFNATAVE 182          
BLAST of CN185402 vs. ExPASy Swiss-Prot
Match: THI4_FUSOX (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 5.660e-43
Identity = 87/134 (64.93%), Postives = 105/134 (78.36%), Query Frame = 2
Query:  260 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLNGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNALAAE 658
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS AY L K  P+++IAIIE SVSPGGGAWL GQLFSAM++RKPA  FL E+G+ Y+++ +YVV+KHAALFTSTIMSK+L  PN+KLFNA   E
Sbjct:   44 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIIGAGSCGLSAAYILGKKRPDLKIAIIEASVSPGGGAWLGGQLFSAMIMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVLQMPNIKLFNATCVE 177          
BLAST of CN185402 vs. ExPASy Swiss-Prot
Match: THI4_ASPOR (Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 1.647e-42
Identity = 88/136 (64.71%), Postives = 109/136 (80.15%), Query Frame = 2
Query:  260 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSK-NPNIQIAIIEQSVSPGGGAWLNGQLFSAMVVRKPAHIFLDELGIDYDE--QDSYVVIKHAALFTSTIMSKLLARPNVKLFNALAAE 658
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS AY L+K  P+++IAI+E SVSPGGGAWL GQLFSAMV+R+PA +FL+ELG+ Y+E    +YVV+KHA+LFTST+MSK+L+ PNVKLFNA A E
Sbjct:   48 FKFAPIRESQVSRAMTRRYFEDLDKYAESDVVIVGAGSCGLSTAYVLAKARPDLKIAIVEASVSPGGGAWLGGQLFSAMVMRRPAEVFLNELGVPYEEDANPNYVVVKHASLFTSTLMSKVLSFPNVKLFNATAVE 183          
BLAST of CN185402 vs. ExPASy Swiss-Prot
Match: THI4_UROFA (Thiazole biosynthetic enzyme, mitochondrial OS=Uromyces fabae GN=THI2 PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 8.173e-42
Identity = 86/163 (52.76%), Postives = 115/163 (70.55%), Query Frame = 2
Query:  182 LQPIKSSRPNNLSISASA---SPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYEL-SKNPNIQIAIIEQSVSPGGGAWLNGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNALAAE 658
            + P+KS + +N +++  A    P  +L   KF PIKE  V R M RRY  DM   A +D    GAGSAGLSCAY L +  P+++I I+E +V+PGGG WL GQL SAMV RKPA  FLD++G+ Y+++ ++VV+KHAALFTST++SK+LA PNVK+FNA A E
Sbjct:   24 MDPLKSKQQSNATVNKPAFKPEPAVNLTPIKFAPIKEHQVQRAMVRRYFQDMEERAISDVIIVGAGSAGLSCAYALGTARPDLKITILESNVAPGGGCWLGGQLMSAMVCRKPADEFLDQVGVPYEDEGNFVVVKHAALFTSTVLSKVLAMPNVKMFNATACE 186          
BLAST of CN185402 vs. ExPASy Swiss-Prot
Match: THI4_FUSSH (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 8.173e-42
Identity = 87/134 (64.93%), Postives = 103/134 (76.87%), Query Frame = 2
Query:  260 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLNGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNALAAE 658
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS  Y L K  P+++IAIIE SVSPGGGAWL GQLFSAMV+RKPA  FL E+G+ Y+++ +YVV+KHAALFTSTIMSK+L  PN KLFNA   E
Sbjct:   48 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIVGAGSCGLSTRYILGKKRPDLKIAIIEASVSPGGGAWLGGQLFSAMVMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVLQLPNCKLFNATCVE 181          
The following BLAST results are available for this feature:
BLAST of CN185402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
THI4_CITSI1.199e-10196.41Thiazole biosynthetic enzyme, chloroplastic OS=Cit... [more]
THI4_ALNGL2.605e-7277.46Thiazole biosynthetic enzyme, chloroplastic OS=Aln... [more]
THI4_ARATH4.913e-7171.43Thiazole biosynthetic enzyme, chloroplastic OS=Ara... [more]
THI41_MAIZE1.296e-6366.84Thiazole biosynthetic enzyme 1-1, chloroplastic OS... [more]
THI42_MAIZE1.692e-6365.97Thiazole biosynthetic enzyme 1-2, chloroplastic OS... [more]
THI2_SCHPO1.759e-4460.96Thiazole biosynthetic enzyme, mitochondrial OS=Sch... [more]
THI4_FUSOX5.660e-4364.93Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI4_ASPOR1.647e-4264.71Thiazole biosynthetic enzyme, mitochondrial OS=Asp... [more]
THI4_UROFA8.173e-4252.76Thiazole biosynthetic enzyme, mitochondrial OS=Uro... [more]
THI4_FUSSH8.173e-4264.93Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001E13_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001E13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185402 ID=CN185402; Name=CN185402; organism=Citrus sinensis; type=EST; length=660bp
GCAGGGCAAATCAAATTACTTCTCATTATCAAACTTCTAAGCCGCAGGGG
AAGGAGGGGTAAAAAAAAAAAACATGGCAGCCATGGCTTCTACAGCTTTC
GCTCCTTCAGTTTCGTCTACCACCAATAAGCTCTTTGACTCATCCTTTCA
TGGGGCTCCCATGTCACCTTCTCTTCTACGTCTTCAACCCATCAAATCTT
CTCGTCCCAACAACTTGTCCATTTCTGCTTCTGCTTCTCCTCCTTATGAC
TTGAACACTTTCAAGTTTGACCCCATCAAAGAATCCATTGTTTCTCGTGA
AATGACGCGCAGGTACATGACGGACATGATCACTTATGCTGACACTGATG
TGGTAGTGGTTGGTGCTGGCTCTGCTGGCCTCTCTTGTGCTTATGAGCTC
AGCAAAAACCCCAACATTCAGATTGCTATTATCGAACAGTCTGTTAGCCC
CGGCGGTGGCGCGTGGCTCAATGGACAGCTCTTCTCTGCCATGGTTGTGC
GCAAACCAGCCCACATCTTCCTTGACGAGCTTGGCATCGACTACGATGAG
CAAGACAGCTATGTTGTGATCAAGCATGCAGCGCTGTTCACCTCCACTAT
AATGAGCAAGCTCCTGGCCCGCCCCAACGTCAAGCTCTTTAATGCACTGG
CAGCCGAGGA
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