CN185394
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185394 vs. ExPASy Swiss-Prot
Match: AIB_ARATH (Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis thaliana GN=AIB PE=2 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 7.619e-26 Identity = 67/124 (54.03%), Postives = 87/124 (70.16%), Query Frame = -2 Query: 363 INELQAKLKVMEAERENLSGNSRDLSAFESNPNVESQNRAPDVDIQAAHDEVVVRVSCPLDSHPASRVIQAFKDAQITVVESKLSTGNDMVFHTFVIKS-QGSEQLPKEKLIAAFSCESSSIQP 731 I ELQ K+K+ME ER G + LS N + +P+VDIQA ++EVVVRV PLDSHPASR+IQA +++ ++++E+KLS D +FHTFVIKS GS+ L KEKLIAAF E+SS QP Sbjct: 437 IKELQEKVKIMEDERV---GTDKSLS----ESNTITVEESPEVDIQAMNEEVVVRVISPLDSHPASRIIQAMRNSNVSLMEAKLSLAEDTMFHTFVIKSNNGSDPLTKEKLIAAFYPETSSTQP 553
BLAST of CN185394 vs. ExPASy Swiss-Prot
Match: BH013_ARATH (Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.539e-23 Identity = 60/129 (46.51%), Postives = 86/129 (66.67%), Query Frame = -2 Query: 348 INELQAKLKVMEAERENLSGNSRDLSAFESNPNVESQNRAPDVDIQAAHDEVVVRVSCPLDSHPASRVIQAFKDAQITVVESKLSTGNDMVFHTFVIKSQGSEQLPKEKLIAAFSCE-SSSIQPLSSVG 731 INEL AKLKVMEAERE L + SNP + + D+++Q + ++V VR++CPL+SHPASR+ AF+++++ V+ S L D V HTFV+K SE+L KEKLI+A S E ++S+Q +S G Sbjct: 475 INELHAKLKVMEAERERLG--------YSSNPPISLDS---DINVQTSGEDVTVRINCPLESHPASRIFHAFEESKVEVINSNLEVSQDTVLHTFVVK---SEELTKEKLISALSREQTNSVQSRTSSG 589
BLAST of CN185394 vs. ExPASy Swiss-Prot
Match: BH003_ARATH (Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.152e-12 Identity = 43/118 (36.44%), Postives = 70/118 (59.32%), Query Frame = -2 Query: 387 INELQAKLKVMEAERENLSGNSRDLSAFESNPNVESQNRAPDVDIQAAHDEVVVRVSCPLDSHPASRVIQAFKDAQITVVESKLSTGNDMVFHTFVIKSQG---SEQLPKEKLIAAFS 731 I ++Q K++V E E++ + ESN Q +VD Q HD+ VVR+SCPL++HP S+VIQ ++ ++ +S ++ + V HTF ++ QG +EQL K+KL+A+ S Sbjct: 362 ITDMQKKIRVYETEKQIMKRR-------ESN-----QITPAEVDYQQRHDDAVVRLSCPLETHPVSKVIQTLRENEVMPHDSNVAITEEGVVHTFTLRPQGGCTAEQL-KDKLLASLS 466 The following BLAST results are available for this feature:
BLAST of CN185394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185394 ID=CN185394; Name=CN185394; organism=Citrus sinensis; type=EST; length=732bpback to top |