CN185385

Overview
NameCN185385
Unique NameCN185385
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length794
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig638 contig Csv1_Contig638:376..1169. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185385 vs. ExPASy Swiss-Prot
Match: Y3550_ARATH (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana GN=At3g05500 PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 1.021e-74
Identity = 137/199 (68.84%), Postives = 167/199 (83.92%), Query Frame = -3
Query:  196 LYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYVVSAWRKLNQMPLFXXXXXXXXXXXAYCSEKYNQTVVSAADKGYKVSSYLPLVPTERIAKVFSNGVVESQPL 792
            +Y  AK KSGPLKPGVESVEG VK VVGPVY+KYH +P+E+LK++D+KVD SVT+LD RVPPV+KQV AQA+SAAQ+AP+VAR++ASEV+ AGV  TASGMAKSVY+KYEPAAKELY+ YEPKAEQ  VSAW+KLNQ+PLF           A+CSEKYN TVV AA+KGY+V+SY+PLVPTERI+K+F+    E++PL
Sbjct:   42 IYAKAKDKSGPLKPGVESVEGAVKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAGVVETASGMAKSVYSKYEPAAKELYANYEPKAEQCAVSAWKKLNQLPLFPRLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAEEKAETEPL 240          
BLAST of CN185385 vs. ExPASy Swiss-Prot
Match: SRP_VITRI (Stress-related protein OS=Vitis riparia GN=SRP PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 8.682e-58
Identity = 111/192 (57.81%), Postives = 142/192 (73.96%), Query Frame = -3
Query:  217 LYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYVVSAWRKLNQMPLFXXXXXXXXXXXAYCSEKYNQTVVSAADKGYKVSSYLPLVPTERIAKVFSNG 792
            LY YAK  SGPLKPGV++VEGTVK V+GPVY+K++ +P ELL F+DRKV+ S+ +L+  VP ++K+   QA++ AQ AP +A +VASEV+  GV  TA  + K+VY+K EP AKEL SKYEP AEQY VSAWR LN++PLF           AY SEKYNQ+V   A++GY V+ YLPL+PTERIAKVF +G
Sbjct:   40 LYEYAKENSGPLKPGVQTVEGTVKTVIGPVYEKFYDVPFELLMFVDRKVEASIYELERHVPSLVKRASCQAITVAQKAPELALAVASEVQRPGVVDTAKNITKNVYSKCEPTAKELCSKYEPVAEQYAVSAWRSLNRLPLFPQVAQVVVPTAAYWSEKYNQSVSYTAERGYTVALYLPLIPTERIAKVFQDG 231          
BLAST of CN185385 vs. ExPASy Swiss-Prot
Match: Y5513_ORYSJ (REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonica GN=Os05g0151300 PE=2 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.641e-48
Identity = 101/201 (50.25%), Postives = 134/201 (66.67%), Query Frame = -3
Query:  187 YGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYVVSAWRKLNQMPLFXXXXXXXXXXXAYCSEKYNQTVVSAADKGYKVSSYLPLVPTERIAKVFSNGVVESQPLASA 789
            Y YAK  +GPL+PGV+ VEGTVK VVGPVYD++HG+P++LLKF+DRKV ESV +LD RVPPV+K+           AP +ARS A+EV+ AG+ GTA+G+AKS   + EP A++LY++YEP AE+    AW  LN++PL            A  S +YN  V   A +G  V++YLPLVPTER+++VF        PLA A
Sbjct:   56 YAYAKQGAGPLRPGVDHVEGTVKAVVGPVYDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVKE-----------APGLARSAAAEVRQAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF------GYPLADA 239          
BLAST of CN185385 vs. ExPASy Swiss-Prot
Match: Y5513_ORYSI (REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica GN=OsI_017815 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.641e-48
Identity = 101/201 (50.25%), Postives = 134/201 (66.67%), Query Frame = -3
Query:  187 YGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYVVSAWRKLNQMPLFXXXXXXXXXXXAYCSEKYNQTVVSAADKGYKVSSYLPLVPTERIAKVFSNGVVESQPLASA 789
            Y YAK  +GPL+PGV+ VEGTVK VVGPVYD++HG+P++LLKF+DRKV ESV +LD RVPPV+K+           AP +ARS A+EV+ AG+ GTA+G+AKS   + EP A++LY++YEP AE+    AW  LN++PL            A  S +YN  V   A +G  V++YLPLVPTER+++VF        PLA A
Sbjct:   56 YAYAKQGAGPLRPGVDHVEGTVKAVVGPVYDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVKE-----------APGLARSAAAEVRQAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF------GYPLADA 239          
BLAST of CN185385 vs. ExPASy Swiss-Prot
Match: SRP_PHAVU (Stress-related protein OS=Phaseolus vulgaris GN=SRP PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 8.429e-45
Identity = 101/190 (53.16%), Postives = 124/190 (65.26%), Query Frame = -3
Query:  223 LYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYVVSAWRKLNQMPLFXXXXXXXXXXXAYCSEKYNQTVVSAADKGYKVSSYLPLVPTERIAKVFS 792
            LY YAK ++GPLKPGV +VE  VK VV PVYD++H +P+ELLK+ DRKV E    LD  VP  +K+V +QA           RSV SEV+  GV+                 AK +YSKYEP AEQ  VSAWRKLNQ+PLF           AYC+EKYN+ +VS+A+KGY+VS+YLPLVPTE+IAKVFS
Sbjct:    6 LYSYAKERAGPLKPGVNTVEDAVKTVVAPVYDRFHLVPVELLKYADRKVGE----LDRHVPSNVKKVSSQA-----------RSVVSEVRRDGVS---------------TFAKTVYSKYEPTAEQCAVSAWRKLNQLPLFPQVANAVLPKAAYCTEKYNEVIVSSAEKGYRVSAYLPLVPTEKIAKVFS 165          
BLAST of CN185385 vs. ExPASy Swiss-Prot
Match: SRPP_HEVBR (Small rubber particle protein OS=Hevea brasiliensis GN=SRPP PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.260e-40
Identity = 94/191 (49.21%), Postives = 114/191 (59.69%), Query Frame = -3
Query:  220 LYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYVVSAWRKLNQMPLFXXXXXXXXXXXAYCSEKYNQTVVSAADKGYKVSSYLPLVPTERIAKVFSN 792
            LY YAK  SGPLKPGV+++E  VK VV PVY     +P+E +KF+D+ VD SVT LD  VPPV+KQV AQ  S AQ AP +   VAS V   GV               +  AK LY+  EPKAEQY V  WR LN++PL             Y SEKYN  V    ++GY+VSSYLPL+PTE+I KVF +
Sbjct:   30 LYLYAKDISGPLKPGVDTIENVVKTVVTPVYY----IPLEAVKFVDKTVDVSVTSLDGVVPPVIKQVSAQTYSVAQDAPRIVLDVASSVFNTGV---------------QEGAKALYANLEPKAEQYAVITWRALNKLPLVPQVANVVVPTAVYFSEKYNDVVRGTTEQGYRVSSYLPLLPTEKITKVFGD 201          
BLAST of CN185385 vs. ExPASy Swiss-Prot
Match: Y2778_ARATH (REF/SRPP-like protein At2g47780 OS=Arabidopsis thaliana GN=At2g47780 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.069e-31
Identity = 75/188 (39.89%), Postives = 106/188 (56.38%), Query Frame = -3
Query:  229 LYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYVVSAWRKLNQMPLFXXXXXXXXXXXAYCSEKYNQTVVSAADKGYKVSSYLPLVPTERIAKV 792
            LY  AK  +GPLK GVE++E  V+ V+ P+Y+K+H +P +LL F+DRKVD+    ++  VP ++KQ  +QAL           +VA+EV+  GV  T   +A+SV  KYEPA           AE Y  + WR LNQ+PLF            Y SEKYN  V    D+ Y  + YLP++P E+I+ +
Sbjct:   61 LYELAKDNAGPLKLGVENIEDCVRTVLAPLYEKFHDVPFKLLLFVDRKVDDVFFDVETYVPSLVKQASSQAL-----------TVATEVQRTGVVDTTKSIARSVRDKYEPA-----------AEYYAATLWRLLNQLPLFPEVAHLVIPTAFYWSEKYNDAVRYVGDRDYFGAEYLPMIPIEKISDI 226          
BLAST of CN185385 vs. ExPASy Swiss-Prot
Match: Y1736_ARATH (REF/SRPP-like protein At1g67360 OS=Arabidopsis thaliana GN=At1g67360 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.976e-21
Identity = 70/191 (36.65%), Postives = 84/191 (43.98%), Query Frame = -3
Query:  226 LYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPK--AEQYVVSAWRKLNQMPLFXXXXXXXXXXXAYCSEKYNQTVVSAADKGYKVSSYLPLVPTERIAKVF 792
            LY YAK  SGPLK  VE VEG V  VV PVY K+  +P  LL F+D KV E   K D   PP+ K+V  QA      A   A+S   E +T G                 P A   Y+  E K       V  W KLNQ               A+ S +YN  V    + GY +  YLPLVP + I K +
Sbjct:   33 LYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFKDVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGG-----------------PKAAFNYAATEYKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSSRYNDLVTDMTNMGYSLVGYLPLVPVDDIVKAY 206          
BLAST of CN185385 vs. ExPASy Swiss-Prot
Match: REF_HEVBR (Rubber elongation factor protein OS=Hevea brasiliensis PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.690e-16
Identity = 42/89 (47.19%), Postives = 61/89 (68.54%), Query Frame = -3
Query:  526 LYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEV 792
            +Y +AK KSGPL+PGV+ +EG VKNV  P+Y+++  +P   LKF+D  V  SVT +D  +PP++K    Q +SA + AP  ARS+AS +
Sbjct:   35 VYLFAKDKSGPLQPGVDIIEGPVKNVAVPLYNRFSYIPNGALKFVDSTVVASVTIIDRSLPPIVKDASIQVVSAIRAAPEAARSLASSL 123          
The following BLAST results are available for this feature:
BLAST of CN185385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
Y3550_ARATH1.021e-7468.84REF/SRPP-like protein At3g05500 OS=Arabidopsis tha... [more]
SRP_VITRI8.682e-5857.81Stress-related protein OS=Vitis riparia GN=SRP PE=... [more]
Y5513_ORYSJ1.641e-4850.25REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 ... [more]
Y5513_ORYSI1.641e-4850.25REF/SRPP-like protein OsI_017815 OS=Oryza sativa s... [more]
SRP_PHAVU8.429e-4553.16Stress-related protein OS=Phaseolus vulgaris GN=SR... [more]
SRPP_HEVBR1.260e-4049.21Small rubber particle protein OS=Hevea brasiliensi... [more]
Y2778_ARATH1.069e-3139.89REF/SRPP-like protein At2g47780 OS=Arabidopsis tha... [more]
Y1736_ARATH4.976e-2136.65REF/SRPP-like protein At1g67360 OS=Arabidopsis tha... [more]
REF_HEVBR3.690e-1647.19Rubber elongation factor protein OS=Hevea brasilie... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0001E04_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185385 ID=CN185385; Name=CN185385; organism=Citrus sinensis; type=EST; length=794bp
TTTTTTTTTTTTTTTTTAGCAATGTCTTTAAAAATTAAATAATCCTCCTT
CACTCCATTTTCAACCCAATACACATCCAGAAAGGGAAACATTTTCACTC
CACAGCTTGCAAGAAAAATTGTGAGGCCAGAAAACAGAAAACAGAAAACA
CAGCTATCAATGCACAACAACATCAGCTTCATGTCCAGCAGAAGCCAGAG
GCTGCGATTCAACAACCCCGTTGCTGAACACCTTAGCAATCCTCTCAGTA
GGGACCAAAGGCAAATATGAGGAGACCTTGTACCCCTTATCTGCAGCGCT
CACCACTGTTTGGTTGTATTTTTCGGAACAATAGGCAGCAGTTGGCACAA
CAACTTGAGCTACTTGAGGGAATAGTGGCATCTGATTGAGCTTGCGCCAA
GCTGACACAACATATTGCTCCGCTTTTGGTTCGTACTTGGAGTAAAGTTC
CTTGGCTGCTGGCTCGTACTTGGTGTAAACGGATTTTGCCATTCCTGAGG
CAGTGCCGGCTACACCGGCAGTCTTCACTTCAGAAGCCACGGATCGTGCC
ACTACGGGAGCCATTTGAGCAGCGGAGAGAGCTTGGGCAGGGACTTGCTT
GAGGACTGGAGGCACACGGCAGTCCAGCTTGGTCACAGACTCATCCACCT
TGCGATCAATAAACTTAAGGAGCTCAATCGGGAGACCATGATACTTATCA
TAAACAGGTCCAACCACATTCTTGACAGTCCCCTCAACGGACTCCACACC
AGGTTTCAATGGTCCGGACTTGGCTTTAGCATAACCATATAGAT
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