CN185383
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185383 vs. ExPASy Swiss-Prot
Match: PATL1_ARATH (Patellin-1 OS=Arabidopsis thaliana GN=PATL1 PE=1 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 1.382e-37 Identity = 74/114 (64.91%), Postives = 92/114 (80.70%), Query Frame = -3 Query: 459 RYIAPEQVPVQYGGLSREGEQEFTTTDPVTEVVVKPASKYTVEIPVTERSILVWELRVLGWDVSYGAEFVPSAEGSYTVIVSKTRKVAPTDEPVICDTFKIGEPGKVVLTIDNQ 800 +YIAPEQVPV+YGGLS++ T + +TE +VKPA+ YT+E+P +E L WELRVLG DVSYGA+F P+ EGSY VIVSKTRK+ TDEPVI D+FK+GEPGK+V+TIDNQ Sbjct: 449 KYIAPEQVPVKYGGLSKDTP---LTEETITEAIVKPAANYTIELPASEACTLSWELRVLGADVSYGAQFEPTTEGSYAVIVSKTRKIGSTDEPVITDSFKVGEPGKIVITIDNQ 559
BLAST of CN185383 vs. ExPASy Swiss-Prot
Match: PATL2_ARATH (Patellin-2 OS=Arabidopsis thaliana GN=PATL2 PE=1 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 7.584e-36 Identity = 77/114 (67.54%), Postives = 88/114 (77.19%), Query Frame = -3 Query: 459 RYIAPEQVPVQYGGLSREGEQEFTTTDPVTEVVVKPASKYTVEIPVTERSILVWELRVLGWDVSYGAEFVPSAEGSYTVIVSKTRKVAPTDEPVICDTFKIGEPGKVVLTIDNQ 800 +Y+APE VPV+YGGLS++ FT D VTE VVK SKYT+++P TE S L WELRVLG DVSYGA+F PS E SYTVIVSK RKV TDEPVI D+FK E GKVV+TIDNQ Sbjct: 557 KYVAPEVVPVKYGGLSKDSP--FTVEDGVTEAVVKSTSKYTIDLPATEGSTLSWELRVLGADVSYGAQFEPSNEASYTVIVSKNRKVGLTDEPVITDSFKASEAGKVVITIDNQ 668
BLAST of CN185383 vs. ExPASy Swiss-Prot
Match: PATL3_ARATH (Patellin-3 OS=Arabidopsis thaliana GN=PATL3 PE=1 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 9.594e-31 Identity = 63/116 (54.31%), Postives = 86/116 (74.14%), Query Frame = -3 Query: 462 RYIAPEQVPVQYGGLSREG---EQEFTTTDPVTEVVVKPASKYTVEIPVTERSILVWELRVLGWDVSYGAEFVPSAEGSYTVIVSKTRKVAPTDEPVICDTFKIGEPGKVVLTIDN 800 +YI+PEQVPVQYGGLS + +F+ D +E+ VKP +K TVEI + E+ LVWE+RV GW+VSY AEFVP + +YTV++ K RK+ P+DEPV+ +FK+ E GKV+LT+DN Sbjct: 358 KYISPEQVPVQYGGLSVDPCDCNPDFSLEDSASEITVKPGTKQTVEIIIYEKCELVWEIRVTGWEVSYKAEFVPEEKDAYTVVIQKPRKMRPSDEPVLTHSFKVNELGKVLLTVDN 473
BLAST of CN185383 vs. ExPASy Swiss-Prot
Match: PATL5_ARATH (Patellin-5 OS=Arabidopsis thaliana GN=PATL5 PE=1 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 8.122e-30 Identity = 62/116 (53.45%), Postives = 84/116 (72.41%), Query Frame = -3 Query: 462 RYIAPEQVPVQYGGLSREG---EQEFTTTDPVTEVVVKPASKYTVEIPVTERSILVWELRVLGWDVSYGAEFVPSAEGSYTVIVSKTRKVAPTDEPVICDTFKIGEPGKVVLTIDN 800 +YI+PE VPVQYGGLS + +FT D TE+ VKP +K TVEI V E+ +VWE+RV+GW+VSYGAEFVP + YTVI+ K RK+ +E V+ +FK+GE G+++LT+DN Sbjct: 533 KYISPEHVPVQYGGLSVDNCECNSDFTHDDIATEITVKPTTKQTVEIIVYEKCTIVWEIRVVGWEVSYGAEFVPENKEGYTVIIQKPRKMTAKNELVVSHSFKVGEVGRILLTVDN 648
BLAST of CN185383 vs. ExPASy Swiss-Prot
Match: PATL4_ARATH (Patellin-4 OS=Arabidopsis thaliana GN=PATL4 PE=1 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 6.659e-24 Identity = 56/114 (49.12%), Postives = 79/114 (69.30%), Query Frame = -3 Query: 462 RYIAPEQVPVQYGGLSREGEQEFTTTDPVTEVVVKPASKYTVEIPVTE-RSILVWELRVLGWDVSYGAEFVPSAEGSYTVIVSKTRKVAPTDEPVICDTFKIGEPGKVVLTIDN 800 +YI +++PVQYGG + EF+ + V+EVVVKP S T+EIP E LVW++ VLGW+V+Y EFVP+ EG+YTVIV K +K+ + P I ++FK + GK+VLT+DN Sbjct: 409 KYIPADELPVQYGGFKTVDDTEFSN-ETVSEVVVKPGSSETIEIPAPETEGTLVWDIAVLGWEVNYKEEFVPTEEGAYTVIVQKVKKMGANEGP-IRNSFKNSQAGKIVLTVDN 520
BLAST of CN185383 vs. ExPASy Swiss-Prot
Match: PATL6_ARATH (Patellin-6 OS=Arabidopsis thaliana GN=PATL6 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.176e-20 Identity = 47/115 (40.87%), Postives = 74/115 (64.35%), Query Frame = -3 Query: 462 HRYIAPEQVPVQYGGLSREGEQEFTTTDPVTEVVVKPASKYTVEIPVTER-SILVWELRVLGWDVSYGAEFVPSAEGSYTVIVSKTRKVAPTDEPVICDTFKIGEPGKVVLTIDN 803 +++I PE +PVQYGGLSR + + P +E +K K ++I E + + W++ V GWD+ Y AEFVP+AE SY ++V K +K+ TDE +C++F E GK++L++DN Sbjct: 274 YKFIRPEDIPVQYGGLSRPTDSQNGPPKPASEFSIKGGEKVNIQIEGIEGGATITWDIVVGGWDLEYSAEFVPNAEESYAIVVEKPKKMKATDE-AVCNSFTTVEAGKLILSVDN 387 The following BLAST results are available for this feature:
BLAST of CN185383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185383 ID=CN185383; Name=CN185383; organism=Citrus sinensis; type=EST; length=823bpback to top |