CN185362
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185362 vs. ExPASy Swiss-Prot
Match: IF2P_RAT (Eukaryotic translation initiation factor 5B OS=Rattus norvegicus GN=Eif5b PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.733e-23 Identity = 55/115 (47.83%), Postives = 73/115 (63.48%), Query Frame = 2 Query: 5 KDPIVLGVDVVEGIAKVGTPICIPQRDFIDIGRIASIENNHKPVDTXXXXXXXXXXXXXSNSEEQQKMFGRHFDIEDELVSHISRKSIDVLKANYRDDLSMDEWRLLVKLKKPFQ 349 +DPIV+GV V G K GTP+C+P ++F+DIG + SIE NHK VD E KMFGRHF+ D LVS ISR+SID LK +RD++ +W+L+V+LKK F+ Sbjct: 1101 RDPIVIGVTVEAGQVKQGTPMCVPSKNFVDIGIVTSIEINHKQVDVAKKGQEVCVKIEPIPGESP-KMFGRHFEATDILVSKISRQSIDALKDWFRDEMQKSDWQLIVELKKVFE 1214
BLAST of CN185362 vs. ExPASy Swiss-Prot
Match: IF2P_PONAB (Eukaryotic translation initiation factor 5B OS=Pongo abelii GN=EIF5B PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 5.733e-23 Identity = 55/115 (47.83%), Postives = 73/115 (63.48%), Query Frame = 2 Query: 5 KDPIVLGVDVVEGIAKVGTPICIPQRDFIDIGRIASIENNHKPVDTXXXXXXXXXXXXXSNSEEQQKMFGRHFDIEDELVSHISRKSIDVLKANYRDDLSMDEWRLLVKLKKPFQ 349 +DPIV+GV V G K GTP+C+P ++F+DIG + SIE NHK VD E KMFGRHF+ D LVS ISR+SID LK +RD++ +W+L+V+LKK F+ Sbjct: 1105 RDPIVMGVTVEAGQVKQGTPMCVPSKNFVDIGIVTSIEINHKQVDVAKKGQEVCVKIEPIPGESP-KMFGRHFEATDILVSKISRQSIDALKDWFRDEMQKSDWQLIVELKKVFE 1218
BLAST of CN185362 vs. ExPASy Swiss-Prot
Match: IF2P_MOUSE (Eukaryotic translation initiation factor 5B OS=Mus musculus GN=Eif5b PE=1 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 5.733e-23 Identity = 55/115 (47.83%), Postives = 73/115 (63.48%), Query Frame = 2 Query: 5 KDPIVLGVDVVEGIAKVGTPICIPQRDFIDIGRIASIENNHKPVDTXXXXXXXXXXXXXSNSEEQQKMFGRHFDIEDELVSHISRKSIDVLKANYRDDLSMDEWRLLVKLKKPFQ 349 +DPIV+GV V G K GTP+C+P ++F+DIG + SIE NHK VD E KMFGRHF+ D LVS ISR+SID LK +RD++ +W+L+V+LKK F+ Sbjct: 1101 RDPIVIGVTVEAGQVKQGTPMCVPSKNFVDIGIVTSIEINHKQVDVAKKGQEVCVKIEPIPGESP-KMFGRHFEATDILVSKISRQSIDALKDWFRDEMQKSDWQLIVELKKVFE 1214
BLAST of CN185362 vs. ExPASy Swiss-Prot
Match: IF2P_HUMAN (Eukaryotic translation initiation factor 5B OS=Homo sapiens GN=EIF5B PE=1 SV=4) HSP 1 Score: 107.842 bits (268), Expect = 5.733e-23 Identity = 55/115 (47.83%), Postives = 73/115 (63.48%), Query Frame = 2 Query: 5 KDPIVLGVDVVEGIAKVGTPICIPQRDFIDIGRIASIENNHKPVDTXXXXXXXXXXXXXSNSEEQQKMFGRHFDIEDELVSHISRKSIDVLKANYRDDLSMDEWRLLVKLKKPFQ 349 +DPIV+GV V G K GTP+C+P ++F+DIG + SIE NHK VD E KMFGRHF+ D LVS ISR+SID LK +RD++ +W+L+V+LKK F+ Sbjct: 1105 RDPIVMGVTVEAGQVKQGTPMCVPSKNFVDIGIVTSIEINHKQVDVAKKGQEVCVKIEPIPGESP-KMFGRHFEATDILVSKISRQSIDALKDWFRDEMQKSDWQLIVELKKVFE 1218
BLAST of CN185362 vs. ExPASy Swiss-Prot
Match: IF2P_SCHPO (Eukaryotic translation initiation factor 5B OS=Schizosaccharomyces pombe GN=SPAC56F8.03 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.663e-20 Identity = 53/121 (43.80%), Postives = 74/121 (61.16%), Query Frame = 2 Query: 5 KDPIVLGVDVVEGIAKVGTPICIPQR------DFIDIGRIASIENNHKPVDTXXXXXXXXXXXXXSNSEEQQKMFGRHFDIEDELVSHISRKSIDVLK-ANYRDDLSMDEWRLLVKLKKPF 346 +DPI+LGVDVVEG+ ++ TPI ++ I++GR+AS+E NHKPVD S Q +FGR D L SHI+R+SID LK +RD++S DEW+L+++LKK F Sbjct: 956 RDPIILGVDVVEGVLRINTPIVAVKQLPNGEPQIIELGRVASLEMNHKPVDKVKKGQAGAGVAMKLESSGSQILFGRQVTESDALYSHITRQSIDSLKDPAFRDEVSRDEWQLIIQLKKLF 1076
BLAST of CN185362 vs. ExPASy Swiss-Prot
Match: IF2P_YEAST (Eukaryotic translation initiation factor 5B OS=Saccharomyces cerevisiae GN=FUN12 PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15 Identity = 46/123 (37.40%), Postives = 69/123 (56.10%), Query Frame = 2 Query: 5 KDPIVLGVDVVEGIAKVGTPIC-------IPQRDFIDIGRIASIENNHKPV-DTXXXXXXXXXXXXXSNSEEQQKMFGRHFDIEDELVSHISRKSIDVLKAN-YRDDLSMDEWRLLVKLKKPF 346 + P+++GVDV+EG +VGTPIC +R + +G++ S+E NH+PV + + QQ ++GRH D D L S +SR+SID LK +RD ++ +W LL KLK F Sbjct: 877 RGPMIIGVDVLEGTLRVGTPICAVKTDPTTKERQTLILGKVISLEINHQPVQEVKKGQTAAGVAVRLEDPSGQQPIWGRHVDENDTLYSLVSRRSIDTLKDKAFRDQVARSDWLLLKKLKVVF 999
BLAST of CN185362 vs. ExPASy Swiss-Prot
Match: IF2P_DICDI (Eukaryotic translation initiation factor 5B OS=Dictyostelium discoideum GN=eif5b PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.730e-11 Identity = 36/114 (31.58%), Postives = 65/114 (57.02%), Query Frame = 2 Query: 8 DPIVLGVDVVEGIAKVGTPICIPQRDFIDIGRIASIENNHKPVDTXXXXXXXXXXXXXSNSEEQQKMFGRHFDIEDELVSHISRKSIDVLKANYRDDLSMDEWRLLVKLKKPFQ 349 +PI++GV V EG ++GTPIC+P+ + D+G++ I+ N K V +N+ + RHFD + + +S I+R+S+D LK + +DL+ + +LL +K ++ Sbjct: 933 NPILVGVRVKEGTLRIGTPICVPESNCADVGKVIGIKLNEKDVTLAKKDDVVSVAIDDNNT---KTTIYRHFDDKKQWMSKITRESLDALKEGWSEDLTKQDIQLLKFMKTVYK 1043 The following BLAST results are available for this feature:
BLAST of CN185362 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185362 ID=CN185362; Name=CN185362; organism=Citrus sinensis; type=EST; length=706bpback to top |