CN185360

Overview
NameCN185360
Unique NameCN185360
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2797 contig Csv1_Contig2797:375..1064. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185360 vs. ExPASy Swiss-Prot
Match: VA721_ARATH (Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana GN=VAMP721 PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.283e-61
Identity = 118/157 (75.16%), Postives = 129/157 (82.17%), Query Frame = -1
Query:  220 YTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHGFNC 690
            +TYCVVA +S+GRQIPM+FLERVK++F  +YGGGKAATA AN LNKEFG KLKE MQYC+DHP+EISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENL  QAQDFR+TGT+MRRKMWLQNM                  LSVCHGF C
Sbjct:   63 FTYCVVAVDSAGRQIPMSFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTTGTQMRRKMWLQNMKIKLIVLAIIIALILIIVLSVCHGFKC 219          
BLAST of CN185360 vs. ExPASy Swiss-Prot
Match: VA722_ARATH (Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana GN=VAMP722 PE=2 SV=2)

HSP 1 Score: 234.958 bits (598), Expect = 2.982e-61
Identity = 118/159 (74.21%), Postives = 129/159 (81.13%), Query Frame = -1
Query:  214 YTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHGFNCGK 690
            +TYCVVA +S+GRQIPMAFLERVK++F  +YGGGKAATA AN LNKEFG KLKE MQYC+DHP+EISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENL  QAQDFR+ GT+MRRKMW QNM                  LS+C GFNCGK
Sbjct:   63 FTYCVVAVDSAGRQIPMAFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTQMRRKMWFQNMKIKLIVLAIIIALILIIILSICGGFNCGK 221          
BLAST of CN185360 vs. ExPASy Swiss-Prot
Match: VA726_ARATH (Putative vesicle-associated membrane protein 726 OS=Arabidopsis thaliana GN=VAMP726 PE=2 SV=2)

HSP 1 Score: 227.639 bits (579), Expect = 4.761e-59
Identity = 113/157 (71.97%), Postives = 125/157 (79.62%), Query Frame = -1
Query:  220 YTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHGFNC 690
            +TYCVV  ES+GRQIPMAFLERVK++F  +YGGGKA+TA AN LNKEFG KLKE MQYC DHPEEISKL+KVKAQV+EVKGVMMENIEKVLDRGEKIELLVDKTENL  QAQDFR+ GTKM+RK+W +NM                  LSVCHGF C
Sbjct:   63 FTYCVVVIESAGRQIPMAFLERVKEDFNKRYGGGKASTAKANSLNKEFGSKLKEHMQYCADHPEEISKLSKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKMKRKLWFENMKIKLIVFGIIVALILIIILSVCHGFKC 219          
BLAST of CN185360 vs. ExPASy Swiss-Prot
Match: VA725_ARATH (Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana GN=VAMP725 PE=2 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 3.086e-58
Identity = 114/157 (72.61%), Postives = 124/157 (78.98%), Query Frame = -1
Query:  220 YTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHGFNC 690
            +TYCVVA ES GRQIPMAFLERVK++F  +YGGGKA TA AN LN+EFG KLKE MQYCVDHP+EISKLAKVKAQV+EVKGVMMENIEKVLDRGEKIELLVDKTENL  QAQDFR+ GTK+RRKMW +NM                  LSVC GF C
Sbjct:  128 FTYCVVAVESVGRQIPMAFLERVKEDFNKRYGGGKATTAQANSLNREFGSKLKEHMQYCVDHPDEISKLAKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKIRRKMWFENMKIKLIVLGIIITLILIIILSVCGGFKC 284          
BLAST of CN185360 vs. ExPASy Swiss-Prot
Match: VA724_ARATH (Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana GN=VAMP724 PE=2 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 4.181e-47
Identity = 91/157 (57.96%), Postives = 111/157 (70.70%), Query Frame = -1
Query:  220 YTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHGFNC 690
            Y YCVVA +S  +QI +AFLERVK +F  +YGGGKA+TA A  LNKEFGP +KE M Y VDH EEI KL KVKAQVSEVK +M+ENI+K +DRGE + +L DKTENL  QAQ+++  GT++RRK+W QNM                  +SVCHGFNC
Sbjct:   64 YAYCVVAKDSLSKQISIAFLERVKADFKKRYGGGKASTAIAKSLNKEFGPVMKEHMNYIVDHAEEIEKLIKVKAQVSEVKSIMLENIDKAIDRGENLTVLTDKTENLRSQAQEYKKQGTQVRRKLWYQNMKIKLVVLGILLLLVLIIWISVCHGFNC 220          
BLAST of CN185360 vs. ExPASy Swiss-Prot
Match: VA723_ARATH (Vesicle-associated membrane protein 723 OS=Arabidopsis thaliana GN=VAMP723 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.066e-42
Identity = 93/159 (58.49%), Postives = 107/159 (67.30%), Query Frame = -1
Query:  214 YTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHGFNCGK 690
            +TYCVVA +S+GR+IPMAFLERVK++F  +YGG KAAT  AN LNKEFG  LKE MQYC+DHP+EIS LAK KAQVSEVK +MMENIEKVL RG   E+L     +   Q Q F    T+M+RK W QNM                  LSVC GFNCGK
Sbjct:   63 FTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQYCMDHPDEISNLAKAKAQVSEVKSLMMENIEKVLARGVICEML----GSSESQPQAFYIKRTQMKRKKWFQNMKIKLIVLAIIIALILIIILSVCGGFNCGK 217          
BLAST of CN185360 vs. ExPASy Swiss-Prot
Match: VA727_ARATH (Vesicle-associated membrane protein 727 OS=Arabidopsis thaliana GN=VAMP727 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.219e-38
Identity = 84/176 (47.73%), Postives = 108/176 (61.36%), Query Frame = -1
Query:  220 YTYCVVADESSGRQIPMAFLERVKDEFVSKYGGG-------------------KAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHGFNC 690
            + + VVADES+GR +P  FLERVK++F  +Y                          + A  L++EFGP LKE MQYC+ HPEE+SKL+K+KAQ++EVKG+MM+NIEKVLDRGEKIELLVDKTENL  QA  F+  G ++RRKMWLQ++                  +  C GF C
Sbjct:   63 FVFLVVADESTGRSVPFVFLERVKEDFKKRYEASIKNDERHPLADEDEDDDLFGDRFSVAYNLDREFGPILKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIELLVDKTENLQFQADSFQRQGRQLRRKMWLQSLQMKLMVAGAVFSFILIVWVVACGGFKC 238          
BLAST of CN185360 vs. ExPASy Swiss-Prot
Match: VA713_ARATH (Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana GN=VAMP713 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.564e-22
Identity = 57/153 (37.25%), Postives = 85/153 (55.56%), Query Frame = -1
Query:  229 TYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHG 687
            T   +ADE++GR IP AFL+ +   FV  YG     +A A  +N EF   L + M++  + P    +++++K ++S+V+ VM+ENI+KVLDRGE++ELLVDKTEN+      FR    + R  MW +N+                    VCHG
Sbjct:   63 TVLCMADETAGRNIPFAFLDDIHQRFVKTYGRA-IHSAQAYSMNDEFSRVLSQQMEFYSNDPNA-DRMSRIKGEMSQVRNVMIENIDKVLDRGERLELLVDKTENMQGNTFRFRKQARRYRTIMWWRNVKLTIALILVLALVVYIAMAFVCHG 213          
BLAST of CN185360 vs. ExPASy Swiss-Prot
Match: VA714_ARATH (Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana GN=VAMP714 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.017e-21
Identity = 48/128 (37.50%), Postives = 83/128 (64.84%), Query Frame = -1
Query:  304 TYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQN 687
            T+  +A+++ GR++P ++LE +   F+  YG   A  APA  +N EF   L + M++   +P  +  L +V+ +VSE++ VM+ENIEK+++RG++IELLVDKT  +   +  FR    ++RR +W++N
Sbjct:   63 TFLCMANDTFGRRVPFSYLEEIHMRFMKNYGK-VAHNAPAYAMNDEFSRVLHQQMEFFSSNPS-VDTLNRVRGEVSEIRSVMVENIEKIMERGDRIELLVDKTATMQDSSFHFRKQSKRLRRALWMKN 188          
BLAST of CN185360 vs. ExPASy Swiss-Prot
Match: VA711_ARATH (Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana GN=VAMP711 PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 3.940e-21
Identity = 55/153 (35.95%), Postives = 84/153 (54.90%), Query Frame = -1
Query:  229 TYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHG 687
            T   +A+E++GR+IP AFLE +   FV  YG     TA A  +N+EF   L + + Y  + P    ++ ++K ++++V+GVM+ENI+KVLDRGE++ELLVDKT N+      FR    + R  +W +N                     +CHG
Sbjct:   62 TVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRA-VHTALAYAMNEEFSRVLSQQIDYYSNDPNA-DRINRIKGEMNQVRGVMIENIDKVLDRGERLELLVDKTANMQGNTFRFRKQARRFRSNVWWRNCKLTVLLILLLLVIIYIAVAFLCHG 212          
The following BLAST results are available for this feature:
BLAST of CN185360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
VA721_ARATH2.283e-6175.16Vesicle-associated membrane protein 721 OS=Arabido... [more]
VA722_ARATH2.982e-6174.21Vesicle-associated membrane protein 722 OS=Arabido... [more]
VA726_ARATH4.761e-5971.97Putative vesicle-associated membrane protein 726 O... [more]
VA725_ARATH3.086e-5872.61Vesicle-associated membrane protein 725 OS=Arabido... [more]
VA724_ARATH4.181e-4757.96Vesicle-associated membrane protein 724 OS=Arabido... [more]
VA723_ARATH1.066e-4258.49Vesicle-associated membrane protein 723 OS=Arabido... [more]
VA727_ARATH1.219e-3847.73Vesicle-associated membrane protein 727 OS=Arabido... [more]
VA713_ARATH3.564e-2237.25Vesicle-associated membrane protein 713 OS=Arabido... [more]
VA714_ARATH3.017e-2137.50Vesicle-associated membrane protein 714 OS=Arabido... [more]
VA711_ARATH3.940e-2135.95Vesicle-associated membrane protein 711 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001D13_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001D13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185360 ID=CN185360; Name=CN185360; organism=Citrus sinensis; type=EST; length=690bp
TTTTTTTTTTTTTTTTTCCACAATATAATGACGGGACTCATTCACAAGCA
AAAATAAGTTTTCGGTTTTCTTTGTAACAAATATAGGGAAACTGCTAACT
TTTTTAGACTAAATACAAAGTCAAGATCATATATATTTATATATCTCTTT
CACAATATCATCACAGAAGCTCTTAGAAGAGCGTAATATAAGCCTCCTGG
AGAATAGCACTCATTTTCCGCAGTTGAAACCATGGCAAACAGAGAGGACT
ATGATGAGGATCAAGGCAATCAGTATTCCCAAAACAATCAGCTTGATCTT
CATATTTTGCAGCCACATTTTCCTCCGCATTTTGGTCCCCGTACTCCGAA
AGTCTTGTGCCTGCTGATGAAGGTTCTCAGTCTTATCGACCAGTAGCTCA
ATCTTTTCCCCCCTATCTAAAACCTTTTCAATATTCTCCATCATAACACC
TTTGACTTCTGAAACCTGAGCCTTAACCTTCGCAAGCTTGCTGATCTCCT
CAGGATGATCAACACAGTACTGCATAAGTTCTTTCAATTTTGGTCCAAAT
TCCTTGTTCAGGCCATTGGCAGGAGCCGTGGCAGCCTTTCCACCCCCATA
TTTGGAAACAAATTCATCCTTGACGCGCTCCAGAAAAGCCATCGGTATTT
GTCTTCCGGACGATTCATCTGCGACCACACAATATGTGTA
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