CN185356

Overview
NameCN185356
Unique NameCN185356
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length710
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9501 contig Csv1_Contig9501:445..1154. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185356 vs. ExPASy Swiss-Prot
Match: MOSC2_BOVIN (MOSC domain-containing protein 2, mitochondrial OS=Bos taurus GN=MOSC2 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.190e-17
Identity = 59/180 (32.78%), Postives = 90/180 (50.00%), Query Frame = -3
Query:  196 ASNWFTNSLGKPS-RVVRYNAESETRP---VDPKYAAGEKIMFFDCYPFMLLSQGSLDALNKLFKEPIPINRFRPNILVDGCEPFFEDLWMGIRINNCPFQGVKLCAPCKVPTINQDPGVAG-PEPSETLRQIR----SDKVLRPNQKQQGKIYFGQNLVWKDNLSNGKVLKLGDPVFVM 708
            A+ WFT+ L   + R+V++    + R    + P      ++ + DC P M+LS+ SL  LN   ++ + IN FRPNI+V GC  F ED W  + I N   + +  C  C + T++ D GV    EP ETL+  R    S+K +  +    G IY+    +          LK+GDPV+ M
Sbjct:  164 AAQWFTSFLKTDAFRLVQFEKNMKARASNEIFPSLDKNYQVAYPDCSPVMILSEASLADLNTRMEKKVKINNFRPNIVVTGCSAFEEDTWDELLIGNVEMKKILACPRCIMTTVDPDTGVIDRKEPLETLKSYRLCDPSEKSIYKSSPLFG-IYYSVEKIGS--------LKVGDPVYQM 334          
BLAST of CN185356 vs. ExPASy Swiss-Prot
Match: MOSC1_HUMAN (MOSC domain-containing protein 1, mitochondrial OS=Homo sapiens GN=MOSC1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.801e-16
Identity = 59/178 (33.15%), Postives = 93/178 (52.25%), Query Frame = -3
Query:  196 SNWFTNSL-GKPSRVVRYNAESETRPVDPKYAAG-----EKIMFFDCYPFMLLSQGSLDALNKLFKEPIPINRFRPNILVDGCEPFFEDLWMGIRINNCPFQGVKLCAPCKVPTINQDPGV-AGPEPSETLRQIRSDKVLRPNQKQQGKI-YFGQNLVWKDNLSNGKVLKLGDPVFVM 705
            + W T+ L  +P R+V +  E   RP  P   A      ++I + D  PF++LS+ SL  LN   ++ +    FRPNI++ GC+ + ED W  + I +   + V  C+ C + T++ D GV +  EP ETL+  R  +     +K  GK   FGQ  V    L N   +K+GDPV+++
Sbjct:  166 AQWITSFLKSQPYRLVHF--EPHMRPRRPHQIADLFRPKDQIAYSDTSPFLILSEASLADLNSRLEKKVKATNFRPNIVISGCDVYAEDSWDELLIGDVELKRVMACSRCILTTVDPDTGVMSRKEPLETLKSYR--QCDPSERKLYGKSPLFGQYFV----LENPGTIKVGDPVYLL 335          
BLAST of CN185356 vs. ExPASy Swiss-Prot
Match: MOSC1_XENLA (MOSC domain-containing protein 1, mitochondrial OS=Xenopus laevis GN=mosc1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.167e-15
Identity = 58/182 (31.87%), Postives = 91/182 (50.00%), Query Frame = -3
Query:  190 ASNWFTNSL--GKPSRVVRYNAE----SETRPVDPKYAAGEKIMFFDCYPFMLLSQGSLDALNKLFKEPIPINRFRPNILVDGCEPFFEDLWMGIRINNCPFQGVKLCAPCKVPTINQDPGV-AGPEPSETLRQIR-SDKVLRPNQKQQGKIYFGQNLVWKDNLSNGKVLKLGDPVF-VMRK 708
            AS W        +P R+V + A+     +++  +  +   + I + D  P MLLS+ S++ALN   ++P+ +  FRP I+  GCE F ED W  +R+     + V  C  C + T+N + GV    EP +TLR  R SD  L+   K      FGQ       +    ++++GDPV+ V RK
Sbjct:  167 ASEWLATYFQSSQPYRLVHFEADVMRPRQSKKKEKLFRDKDVIAYPDASPIMLLSETSMEALNSRLEQPVSLANFRPCIVASGCEAFAEDDWDDVRLGATRLKRVMACGRCVLTTVNPNSGVITRKEPLDTLRTFRQSDSSLKEVYKNAP--LFGQYY----GVEQTGIIRVGDPVYRVTRK 342          
BLAST of CN185356 vs. ExPASy Swiss-Prot
Match: MOSC1_MOUSE (MOSC domain-containing protein 1, mitochondrial OS=Mus musculus GN=Mosc1 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 9.883e-15
Identity = 52/178 (29.21%), Postives = 91/178 (51.12%), Query Frame = -3
Query:  196 ASNWFTNSLGKPS-RVVRYNAESE---TRPVDPKYAAGEKIMFFDCYPFMLLSQGSLDALNKLFKEPIPINRFRPNILVDGCEPFFEDLWMGIRINNCPFQGVKLCAPCKVPTINQDPGVAG-PEPSETLRQIRSDKVLRPN-QKQQGKI-YFGQNLVWKDNLSNGKVLKLGDPVFVM 708
            A+ W ++ L   S R+V +        +R +   +   +++ + D  PF++LS+ SL+ LN   +  +    FRPNI++ GC  + ED W  + I +   + V  C  C + T++ D G++   EP ETL+  R   +  P+ Q   GK+  FGQ       L N   +++GDPV+++
Sbjct:  168 AAQWVSSFLKMQSCRLVHFEPHMRPRSSRQMKAVFRTKDQVAYSDASPFLVLSEASLEDLNSRLERRVKATNFRPNIVISGCGVYAEDSWNEVLIGDVELKRVMACTRCLLTTVDPDTGISDRKEPLETLKSYR---LCDPSEQALYGKLPIFGQYFA----LENPGTIRVGDPVYLL 338          
BLAST of CN185356 vs. ExPASy Swiss-Prot
Match: MOSC2_MOUSE (MOSC domain-containing protein 2, mitochondrial OS=Mus musculus GN=Mosc2 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.291e-14
Identity = 56/179 (31.28%), Postives = 87/179 (48.60%), Query Frame = -3
Query:  196 SNWFTNSLGKPS-RVVRYNAESETRPV-----DPKYAAGEKIMFFDCYPFMLLSQGSLDALNKLFKEPIPINRFRPNILVDGCEPFFEDLWMGIRINNCPFQGVKLCAPCKVPTINQDPGVAG-PEPSETLRQIRSDKVLRPNQKQ--QGKIYFGQNLVWKDNLSNGKVLKLGDPVFVM 705
            + WFTN L   + R+V+++   + R          Y    ++ + DC P  L+S+ SL  LN   K+ + +  FRPNI+V GCE F ED W  + I +   + V  C  C + T++ D G+    EP ETL+  R   +  P+ K   Q    FG       ++     L++GDPV+ M
Sbjct:  165 AQWFTNYLKTQAYRLVQFDTSMKGRTTKKLYPSESYLQNYEVAYPDCSPVHLISEASLVDLNTRLKKKVKMEYFRPNIVVSGCEAFEEDTWDELLIGDVEMKRVLSCPRCVLTTVDPDTGIIDRKEPLETLKSYR---LCDPSVKSIYQSSPLFGMYF----SVEKLGSLRVGDPVYRM 336          
BLAST of CN185356 vs. ExPASy Swiss-Prot
Match: MOSC2_RAT (MOSC domain-containing protein 2, mitochondrial OS=Rattus norvegicus GN=Mosc2 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.366e-14
Identity = 54/179 (30.17%), Postives = 88/179 (49.16%), Query Frame = -3
Query:  196 SNWFTNSLGKPS-RVVRYNAESETRPV-----DPKYAAGEKIMFFDCYPFMLLSQGSLDALNKLFKEPIPINRFRPNILVDGCEPFFEDLWMGIRINNCPFQGVKLCAPCKVPTINQDPGVAG-PEPSETLRQIRSDKVLRPNQKQ--QGKIYFGQNLVWKDNLSNGKVLKLGDPVFVM 705
            + WFT+ L   + R+V+++ + + R          Y    ++ + DC P  L+S+ SL  LN   ++ + +  FRPNI+V GCE F ED W  + I +   + V  C  C + T++ D G+    EP ETL+  R   +  P+ K   Q    FG       ++     L++GDPV+ M
Sbjct:  165 ARWFTSYLKTQAYRLVQFDTKMKGRTTKKLYPSESYLQNYEVAYPDCSPIHLISEASLVDLNTRLQKKVKMEYFRPNIVVSGCEAFEEDTWDELLIGDVEMKRVLSCPRCVLTTVDPDTGIIDRKEPLETLKSYR---LCDPSVKSLYQSSPLFGMYF----SVEKIGSLRVGDPVYRM 336          
BLAST of CN185356 vs. ExPASy Swiss-Prot
Match: YCBX_ECOLI (Uncharacterized protein ycbX OS=Escherichia coli (strain K12) GN=ycbX PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.434e-13
Identity = 51/173 (29.48%), Postives = 85/173 (49.13%), Query Frame = -3
Query:  163 YNAESETRPVDPKYAAGEK------IMFFDCYPFMLLSQGSLDALNKLFKEPIPINRFRPNILVDGCEPFFEDLWMGIRINNCPFQGVKLCAPCKVPTINQDPGVAGP--EPSETLRQIRSDKVLRPNQKQQGKIYFGQNLVWKDNLSNGKVLKLGDPVFVMRKVNSPAEAAA 657
            ++ E + R V P+     K      + F D YP++L ++ SL  L +     + + +FRPN++V G   + ED W  IRI +  F  VK C+ C   T++ + G   P  EP +TL+  R+        +  G + FGQNL+ +    N  V+++GD V ++    +    AA
Sbjct:  114 FSREVQLRWVGPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDLQQRCPASVKMEQFRPNLVVSGASAWEEDRWKVIRIGDVVFDVVKPCSRCIFTTVSPEKGQKHPAGEPLKTLQSFRT-------AQDNGDVDFGQNLIAR----NSGVIRVGDEVEILATAPAKIYGAA 275          
BLAST of CN185356 vs. ExPASy Swiss-Prot
Match: MOSC2_MACFA (MOSC domain-containing protein 2, mitochondrial OS=Macaca fascicularis GN=MOSC2 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.434e-13
Identity = 49/181 (27.07%), Postives = 91/181 (50.28%), Query Frame = -3
Query:  196 ASNWFTNSLG-KPSRVVRYNAESE---TRPVDPKYAAGEKIMFFDCYPFMLLSQGSLDALNKLFKEPIPINRFRPNILVDGCEPFFEDLWMGIRINNCPFQGVKLCAPCKVPTINQDPGVAGPEPSETLRQIRSDKVLRPNQKQQGK------IYFGQNLVWKDNLSNGKVLKLGDPVFVM 708
            A+ WFTN L  +  R+V++    +   +R + P      ++ + DC P ++++  SL  LN   ++ + +  FRPNI+V GC+ F ED W  + I +   + +  C  C + T++ D GV   +  E L  ++S ++  P++++  K      IY+    +          L++GDPV+ M
Sbjct:  164 AAQWFTNFLKTEVYRLVQFETNMKGRTSRKLLPTLDQNYQVAYPDCSPLLIMTDASLVDLNTRIEKKMKMENFRPNIVVTGCDAFEEDTWDELLIGSVEVKKIMACPRCILTTVDPDTGVI--DRKEPLDTLKSYRLCDPSERELYKLSPLFGIYYSVEKIGS--------LRVGDPVYRM 334          
BLAST of CN185356 vs. ExPASy Swiss-Prot
Match: MOSC1_DANRE (MOSC domain-containing protein 1, mitochondrial OS=Danio rerio GN=mosc1 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.179e-13
Identity = 52/174 (29.89%), Postives = 83/174 (47.70%), Query Frame = -3
Query:  202 SNWFTNSL--GKPSRVVRYNAESET-RP--VDPKYAAGEKIMFFDCYPFMLLSQGSLDALNKLFKEPIPINRFRPNILVDGCEPFFEDLWMGIRINNCPFQGVKLCAPCKVPTINQDPGV-AGPEPSETLRQIRSDKVLRPNQKQQGKIYFGQNLVWKDNLSNGKVLKLGDPVF 705
            S W T  L   KP R+V Y  + +  RP   +P +   +++ + D  P ML+++ S+  LN    + + + +FRP+I+V  CE F ED W  IRI     + V  C  C   T++ + GV +  EP ETL+  R     +      G+ Y          +    VL +G+PV+
Sbjct:  157 SEWLTRFLEADKPVRLVHYEPDLKPQRPHEKEPLFPKDDEVAYPDAAPVMLMTEASVGDLNSRLDKDLSVFQFRPSIVVSDCEAFTEDTWDHIRIGEVELKRVIGCGRCLFTTVDPETGVFSRKEPLETLKTYRMTDPKQKTSPILGQYY---------TVRKTGVLHVGEPVY 321          
BLAST of CN185356 vs. ExPASy Swiss-Prot
Match: MOSC2_HUMAN (MOSC domain-containing protein 2, mitochondrial OS=Homo sapiens GN=MOSC2 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.996e-12
Identity = 48/181 (26.52%), Postives = 90/181 (49.72%), Query Frame = -3
Query:  196 ASNWFTNSLGKPS-RVVRYNAESE---TRPVDPKYAAGEKIMFFDCYPFMLLSQGSLDALNKLFKEPIPINRFRPNILVDGCEPFFEDLWMGIRINNCPFQGVKLCAPCKVPTINQDPGVAGPEPSETLRQIRSDKVLRPNQKQQGK------IYFGQNLVWKDNLSNGKVLKLGDPVFVM 708
            A+ WFTN L   + R+V++    +   +R + P      ++ + D  P ++++  SL  LN   ++ + +  FRPNI+V GC+ F ED W  + I +   + V  C  C + T++ D GV   +  + L  ++S ++  P++++  K      IY+    +          L++GDPV+ M
Sbjct:  164 AAKWFTNFLKTEAYRLVQFETNMKGRTSRKLLPTLDQNFQVAYPDYCPLLIMTDASLVDLNTRMEKKMKMENFRPNIVVTGCDAFEEDTWDELLIGSVEVKKVMACPRCILTTVDPDTGVI--DRKQPLDTLKSYRLCDPSERELYKLSPLFGIYYSVEKIGS--------LRVGDPVYRM 334          
The following BLAST results are available for this feature:
BLAST of CN185356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
MOSC2_BOVIN6.190e-1732.78MOSC domain-containing protein 2, mitochondrial OS... [more]
MOSC1_HUMAN1.801e-1633.15MOSC domain-containing protein 1, mitochondrial OS... [more]
MOSC1_XENLA1.167e-1531.87MOSC domain-containing protein 1, mitochondrial OS... [more]
MOSC1_MOUSE9.883e-1529.21MOSC domain-containing protein 1, mitochondrial OS... [more]
MOSC2_MOUSE1.291e-1431.28MOSC domain-containing protein 2, mitochondrial OS... [more]
MOSC2_RAT8.366e-1430.17MOSC domain-containing protein 2, mitochondrial OS... [more]
YCBX_ECOLI2.434e-1329.48Uncharacterized protein ycbX OS=Escherichia coli (... [more]
MOSC2_MACFA2.434e-1327.07MOSC domain-containing protein 2, mitochondrial OS... [more]
MOSC1_DANRE3.179e-1329.89MOSC domain-containing protein 1, mitochondrial OS... [more]
MOSC2_HUMAN5.996e-1226.52MOSC domain-containing protein 2, mitochondrial OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001D11_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185356 ID=CN185356; Name=CN185356; organism=Citrus sinensis; type=EST; length=710bp
TTTTTTTTTTTTTTTTTCCCCCGCAAATGGCACCTTGCTGGGGCATAGCA
AGCAACAAACCAGTTTCTTATTCCACTAGACAATGATACACACACAACAA
AGTTTAATTTATTGGCCCCAACAACAGCATTAGCATTACTAACAAATATT
CAAAAAAGCTCAAGCTGCTGCCTCAGCGGGAGAATTGACCTTCCTCATGA
CAAAAACCGGATCCCCAAGTTTAAGCACCTTTCCATTACTAAGGTTGTCC
TTCCACACCAAGTTCTGCCCAAAGTATATCTTTCCCTGCTGTTTTTGATT
TGGACGCAAAACTTTATCTGACCTAATTTGCCTTAGGGTTTCACTTGGTT
CGGGACCAGCAACACCAGGGTCTTGATTGATAGTTGGCACCTTACAGGGG
GCACACAGCTTAACACCTTGAAATGGGCAATTGTTTATTCGGATGCCCAT
CCATAAGTCCTCAAAAAACGGTTCACAACCATCAACAAGGATGTTTGGTC
GAAAACGGTTAATTGGAATAGGCTCCTTGAAAAGCTTATTAAGGGCATCC
AAAGATCCCTGAGACAACAGCATAAATGGATAACAATCAAAAAACATTAT
TTTCTCTCCAGCAGCATATTTGGGATCGACAGGTCTAGTTTCTGATTCTG
CATTGTAACGAACTACCCGACTAGGTTTCCCAAGGGAATTTGTAAACCAA
TTTGAAGCTT
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