CN185345

Overview
NameCN185345
Unique NameCN185345
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length560
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185345 vs. ExPASy Swiss-Prot
Match: Y1754_ARATH (Uncharacterized protein At1g77540 OS=Arabidopsis thaliana GN=At1g77540 PE=1 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 2.493e-40
Identity = 78/104 (75.00%), Postives = 88/104 (84.62%), Query Frame = 1
Query:    7 KSEKEIPKIVWNESKRRFETEDKEAYVEYVVRENGKVMDLVHTYVPSSKRGLGLASHLCRAAFNHAKSHSMSIIPTCSYVSDTYLPRNPTWNSIIYSEDPRSSI 318
            K   E PKIVWNE KRRFETED EA++EY +R NGKVMDLVHTYVPS KRGLGLASHLC AAF HA SHS+SIIP+CSYVSDT+LPRNP+W  +I+SE  +SSI
Sbjct:   11 KMATEPPKIVWNEGKRRFETEDHEAFIEYKMRNNGKVMDLVHTYVPSFKRGLGLASHLCVAAFEHASSHSISIIPSCSYVSDTFLPRNPSWKPLIHSEVFKSSI 114          
The following BLAST results are available for this feature:
BLAST of CN185345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1754_ARATH2.493e-4075.00Uncharacterized protein At1g77540 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0001D04_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185345 ID=CN185345; Name=CN185345; organism=Citrus sinensis; type=EST; length=560bp
TTGACGAAATCAGAGAAGGAGATACCAAAGATCGTGTGGAACGAGAGCAA
GCGGAGGTTCGAAACGGAAGACAAAGAAGCTTACGTTGAATATGTGGTAA
GAGAAAATGGAAAAGTGATGGACTTGGTTCACACATACGTGCCAAGTTCA
AAAAGAGGCTTAGGCTTGGCTTCTCATCTCTGTCGTGCTGCCTTCAATCA
TGCCAAATCTCACTCCATGTCCATCATCCCCACTTGCTCTTACGTCTCTG
ACACTTATCTTCCTCGGAATCCAACCTGGAATTCTATCATATACTCAGAA
GATCCCAGATCTAGCATATAAATGTCGCCATCTTTAACTTTTCAGGTGCC
TGTGTAATTGTTTGTGATCCAAGTGAAGGTTCTGTTCTCTTATCTCTCAG
GCTCACACTATTGAGGCCTATAATTATTGCAGATACAGAATAGCCATTTT
CCTTTGCCTATTGCAAATAATATGCACTCACTGTATTTAAAAAAGTGCAC
ATCCCTGTGATATCATAATTTATGTTGGGTTGCCATTTGCTCTCAAAAAA
AAAAAAAAAA
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