CN185305

Overview
NameCN185305
Unique NameCN185305
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig700 contig Csv1_Contig700:6..679. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185305 vs. ExPASy Swiss-Prot
Match: EP1G_DAUCA (Epidermis-specific secreted glycoprotein EP1 OS=Daucus carota GN=EP1 PE=1 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 4.496e-75
Identity = 133/196 (67.86%), Postives = 156/196 (79.59%), Query Frame = 3
Query:   87 VPANERFKFLNEGEFGPFINEYDADYRMISIFNSPFQLGFYNTTPNAYTLALRWGIQRNEPLYRWVWEANRGKPVRENATFSLGTDGNLVLAEANGTVVWQSNTSNKGVVGFKVLPNGNMVLHDSKGNFIWQSFDYPTDTLLVGQSLRVGGVTKLVSRLSIKENVDGPYSFVMESDRLSLYYKSSNVPRPVVYFTF 674
            VPANE FKF+NEGE G +I+EY  DYR +  F SPFQL FYN TP A+TLALR G++R E L RWVWEANRG PV ENAT + G DGNLVLA +NG V WQ++T+NKGVVG K+LPNGNMVL+DSKG F+WQSFD PTDTLLVGQSL++G VTKLVSR S  ENV+GPYS VME   L LYYK +  P+P+ Y++F
Sbjct:   26 VPANETFKFVNEGELGQYISEYFGDYRPLDPFTSPFQLCFYNQTPTAFTLALRMGLRRTESLMRWVWEANRGNPVDENATLTFGPDGNLVLARSNGQVAWQTSTANKGVVGLKILPNGNMVLYDSKGKFLWQSFDTPTDTLLVGQSLKMGAVTKLVSRASPGENVNGPYSLVMEPKGLHLYYKPTTSPKPIRYYSF 221          
BLAST of CN185305 vs. ExPASy Swiss-Prot
Match: SLSG3_BRAOL (S-locus-specific glycoprotein S13 OS=Brassica oleracea GN=SLSG PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 7.296e-17
Identity = 62/164 (37.80%), Postives = 86/164 (52.44%), Query Frame = 3
Query:  192 FQLGFYNTTPNAYTLALRW--GIQRNEPLYR-WVWEANRGKPVRENATFSLGTDGNLVLAEANGTVVWQSNTSN---KGVVGFKVLPNGNMVLHDSKGN----FIWQSFDYPTDTLL----VGQSLRVGGVTKLVSRLSIKENVDGPYSFVMESDRLSLYYKSS 641
            F+LGF+ TT ++     RW  GI   +  YR +VW ANR  P+  +      +  NLVL + +   VW +N +    +  V  ++L NGN V+ DS  N    F+WQSFDYPTDTLL    +G  L+ G    L S  S  +   G YS+ +E  RL  +Y SS
Sbjct:   56 FELGFFKTTSSS-----RWYLGIWYKKFPYRTYVWVANRDNPLSNDIGTLKISGNNLVLLDHSNKSVWSTNVTRGNERSPVVAELLDNGNFVMRDSNSNNASQFLWQSFDYPTDTLLPEMKLGYDLKTGLNRFLTSWRSSDDPSSGDYSYKLELRRLPEFYLSS 214          
BLAST of CN185305 vs. ExPASy Swiss-Prot
Match: KPRO_MAIZE (Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.595e-14
Identity = 52/161 (32.30%), Postives = 83/161 (51.55%), Query Frame = 3
Query:  192 FQLGFYNTTPNAYTLALRWG-----IQRNEPLYRWVWEANRGKPVR-ENATFSLGTDGNLVLAEANGTVVWQSNTSN-KGVVGFKVLPNGNMVLHDSKGNFIWQSFDYPTDTLLVGQSLRVGGVTKLVSRLSIKENVDGPYSFVMESDRLSLYYKSSNVPR 653
            F  GFY    +A+T ++ +         N+ +   VW AN  +PV    +  +L  DGN+VL + +G  VW+++ +N  GV   ++L  GN+V+ DS GN +WQSFD PTDT L  Q   +   T+LV     +     P +++     LS+     +VP+
Sbjct:   55 FSSGFYEVYTHAFTFSVWYSKTEAAAANNKTI---VWSANPDRPVHARRSALTLQKDGNMVLTDYDGAAVWRADGNNFTGVQRARLLDTGNLVIEDSGGNTVWQSFDSPTDTFLPTQ--LITAATRLVPTTQSR----SPGNYIFRFSDLSVLSLIYHVPQ 206          
BLAST of CN185305 vs. ExPASy Swiss-Prot
Match: SLSG2_BRAOA (S-locus-specific glycoprotein BS29-2 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.550e-14
Identity = 57/161 (35.40%), Postives = 84/161 (52.17%), Query Frame = 3
Query:  195 QLGFYNTTPNAYTLALRWGIQRNEPLYRWVWEANRGKPVRENATFSLGT----DGNLVLAEANGTVVWQSNTSN---KGVVGFKVLPNGNMVLHDSKGN----FIWQSFDYPTDTLL----VGQSLRVGGVTKLVSRLSIKENVDGPYSFVMESDRLSLYY 632
            +LGF+ T  ++      W  + +E  Y  VW ANR  P+    + S+GT    + NLVL + +   +W +N +    +  V  ++L NGN VL DS  N    F+WQSFDYPTDTLL    +G  LR G    L S  S  +   G +S+ +++ RL  +Y
Sbjct:   56 ELGFFRTPSSSRWYLGMWYKKLSERTY--VWVANRDNPL----SCSIGTLKISNMNLVLLDHSNKSLWSTNHTRGNERSPVVAELLANGNFVLRDSNKNDRSGFLWQSFDYPTDTLLPEMKLGYDLRTGLNRFLTSWRSSDDPSSGDFSYKLQTRRLPEFY 210          
BLAST of CN185305 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.860e-14
Identity = 59/163 (36.20%), Postives = 87/163 (53.37%), Query Frame = 3
Query:  186 SPFQLGFYNTTPNAYTLALRWGIQRNEPLYRWVWEANRGKPVRENATFSLGTDGN-LVLAEANGTVVWQSNTSN---KGVVGFKVLPNGNMVLHDSKGN----FIWQSFDYPTDTLL----VGQSLRVGGVTKLVSRLSIKENVDGPYSFVMESDRLSLYYKS 638
            S F++GF+ T    Y L + W  + ++  Y  VW ANR  P+  NA  +L   GN LVL + +   VW +N +    +  V  ++L NGN V+ DS  N    ++WQSFDYPTDTLL    +G +L+ G    L S  S  +   G +S+ +E+  L  +Y S
Sbjct:   55 SIFEVGFFRTNSRWY-LGM-WYKKVSDRTY--VWVANRDNPL-SNAIGTLKISGNNLVLLDHSNKPVWWTNLTRGNERSPVVAELLANGNFVMRDSSNNDASEYLWQSFDYPTDTLLPEMKLGYNLKTGLNRFLTSWRSSDDPSSGNFSYKLETQSLPEFYLS 212          
BLAST of CN185305 vs. ExPASy Swiss-Prot
Match: SLSG4_BRAOL (S-locus-specific glycoprotein S14 (Fragment) OS=Brassica oleracea GN=SLSG PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.682e-13
Identity = 56/164 (34.15%), Postives = 82/164 (50.00%), Query Frame = 3
Query:  192 FQLGFYNTTPNAYTLALRWGIQRNEPLYRWVWEANRGKPVREN-ATFSLGTDGNLVLAEANGTVVWQSNTSN---KGVVGFKVLPNGNMVLHDSKGN----FIWQSFDYPTDTLL----VGQSLRVGGVTKLVSRLSIKENVDGPYSFVMESDRLSLYYKSSNV 647
            F+LGF+ T  ++      W  + ++  Y  VW ANR  P+  +  T  +  +    L  +N +V W +N +    +  V   VL NGN V+ DS  N    F+WQSFD+PTDTLL    +   L+ G    L SR S  +   G +S+ +E  RL  +Y SS V
Sbjct:   53 FELGFFRTNSSSRWYLGIWYKKVSDRTY--VWVANRDNPLSSSIGTLKISGNNPCHLDHSNKSV-WSTNLTRGNERSPVVADVLANGNFVMRDSNNNDASGFLWQSFDFPTDTLLPEMKLSYDLKTGLNRFLTSRRSSDDPSSGDFSYKLEPRRLPEFYLSSGV 213          
BLAST of CN185305 vs. ExPASy Swiss-Prot
Match: SLSG6_BRAOL (S-locus-specific glycoprotein S6 OS=Brassica oleracea GN=SLSG PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.197e-13
Identity = 60/162 (37.04%), Postives = 83/162 (51.23%), Query Frame = 3
Query:  192 FQLGFYNTTPNAYTLALRW--GIQRNEPLYR-WVWEANRGKPVRENATFSLGTDGN-LVLAEANGTVVWQSNTSNKGV---VGFKVLPNGNMVLHDSKGN----FIWQSFDYPTDTLL----VGQSLRVGGVTKLVSRLSIKENVDGPYSFVMESDRLSLYY 632
            F+LGF+ T  ++     RW  GI   + L R +VW ANR  P+  NA  +L   GN LVL       VW +N +       V  ++L NGN V+ DS  N    ++WQSFDYPTDTLL    +G  L+ G    L S  S  +   G +S+ +E+  L  +Y
Sbjct:   56 FELGFFRTNSSS-----RWYLGIWYKKLLDRTYVWVANRDNPL-SNAIGTLKISGNNLVLLGHTNKSVWSTNLTRGNERLPVVAELLSNGNFVMRDSSNNDASEYLWQSFDYPTDTLLPEMKLGYDLKTGLNRFLTSWRSSDDPSSGDFSYKLETRSLPEFY 211          
BLAST of CN185305 vs. ExPASy Swiss-Prot
Match: SLSG1_BRAOA (S-locus-specific glycoprotein BS29-1 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.205e-11
Identity = 54/157 (34.39%), Postives = 79/157 (50.32%), Query Frame = 3
Query:  192 FQLGFYNTTP-NAYTLALRWGI----QRNEPLYRWVWEANRGKPVRENATFSLGTDGNLVLAEANGTVVWQSNTSNKG--VVGFKVLPNGNMVLHDSK----GNFIWQSFDYPTDTLL----VGQSLRVGGVTK-LVSRLSIKENVDGPYSFVMESD 614
            F+LGF+ TT  N+     RW +    +       +VW ANR   +  +      +  +LVL + + T VW +N +      V  ++L NGN VL DSK      F+WQSFDYP DTLL    +G++    G  K L S  S  +   G YSF++E++
Sbjct:   53 FELGFFKTTTRNSPDGTDRWYLGIWYKTTSGHRTYVWVANRDNALHNSMGTLKISHASLVLLDHSNTPVWSTNFTGVAHLPVTAELLANGNFVLRDSKTTALDRFMWQSFDYPVDTLLPEMKLGRNRNGSGNEKILTSWKSPTDPSSGDYSFILETE 209          
BLAST of CN185305 vs. ExPASy Swiss-Prot
Match: SLSG0_BRAOA (S-locus-specific glycoprotein OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.056e-11
Identity = 54/158 (34.18%), Postives = 82/158 (51.90%), Query Frame = 3
Query:  192 FQLGFYNTTP-NAYTLALRWGI----QRNEPLYRWVWEANRGKPVRENATFSLGTDGNLVLAEANGTVVWQSNTSNKG--VVGFKVLPNGNMVLHDSKGN----FIWQSFDYPTDTLL----VGQSLRVGGVTK--LVSRLSIKENVDGPYSFVMESD 614
            F+LGF+ TT  N+     RW +    +       +VW ANR   +  +      +  +LVL + + T VW +N +      V  ++L NGN VL DSK N    F+WQSFDYP DTLL    +G++L +G   +  L S  S  +   G +SF++E++
Sbjct:   53 FELGFFKTTTRNSPDGTDRWYLGIWYKTTSGHRTYVWVANRDNALHNSMGTLKISHASLVLLDHSNTPVWSTNFTGVAHLPVTAELLANGNFVLRDSKTNDLDRFMWQSFDYPVDTLLPEMKLGRNL-IGSENEKILTSWKSPTDPSSGDFSFILETE 209          
The following BLAST results are available for this feature:
BLAST of CN185305 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
EP1G_DAUCA4.496e-7567.86Epidermis-specific secreted glycoprotein EP1 OS=Da... [more]
SLSG3_BRAOL7.296e-1737.80S-locus-specific glycoprotein S13 OS=Brassica oler... [more]
KPRO_MAIZE2.595e-1432.30Putative receptor protein kinase ZmPK1 OS=Zea mays... [more]
SLSG2_BRAOA7.550e-1435.40S-locus-specific glycoprotein BS29-2 OS=Brassica o... [more]
SRK6_BRAOE9.860e-1436.20Putative serine/threonine-protein kinase receptor ... [more]
SLSG4_BRAOL1.682e-1334.15S-locus-specific glycoprotein S14 (Fragment) OS=Br... [more]
SLSG6_BRAOL2.197e-1337.04S-locus-specific glycoprotein S6 OS=Brassica olera... [more]
SLSG1_BRAOA1.205e-1134.39S-locus-specific glycoprotein BS29-1 OS=Brassica o... [more]
SLSG0_BRAOA2.056e-1134.18S-locus-specific glycoprotein OS=Brassica oleracea... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0001C03_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185305 ID=CN185305; Name=CN185305; organism=Citrus sinensis; type=EST; length=674bp
ATTAAACTACCCAAATGTCATCTTCTTCAGCAATATTCTCCCTCTTCTTC
CTCTGTTCACTCATTTTCTCCATTGCTAATGCACAGGTTCCTGCCAATGA
AAGGTTTAAGTTCCTGAATGAAGGAGAATTTGGTCCATTCATTAATGAAT
ATGATGCGGATTACAGAATGATCAGCATCTTCAATTCTCCGTTCCAGCTA
GGCTTTTACAACACAACACCAAATGCTTACACCCTAGCCCTCCGGTGGGG
TATCCAAAGGAACGAGCCGCTTTACCGTTGGGTTTGGGAAGCAAACCGCG
GCAAACCGGTTCGCGAAAACGCCACCTTTTCTTTGGGGACCGACGGGAAT
CTTGTCTTGGCGGAAGCAAATGGCACCGTCGTATGGCAATCCAACACTTC
CAACAAAGGTGTTGTGGGGTTCAAGGTGCTCCCGAATGGAAACATGGTGC
TTCATGACTCAAAGGGTAACTTTATCTGGCAGAGTTTTGATTATCCGACT
GATACTCTCTTGGTGGGTCAGTCTCTTCGCGTCGGTGGGGTCACCAAGCT
CGTGAGCAGACTTTCCATTAAAGAAAACGTTGACGGCCCTTACAGCTTTG
TAATGGAGTCTGATAGATTGTCACTCTATTACAAAAGCAGCAATGTTCCC
CGGCCCGTTGTTTACTTTACTTTC
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