CN185292

Overview
NameCN185292
Unique NameCN185292
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13481 contig Csv1_Contig13481:923..1580. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CN185292 vs. ExPASy Swiss-Prot
Match: B2_DAUCA (B2 protein OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.339e-36
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = -1 
Query:  385 KAASFGGTNIDPTAWEDKKCPGESRFPAQVRVVTRKICEPLEEDSFRPILHHYDGPKFRLELNVPEAISLLDIFEE 612
            +AASFGGTNIDPTAWEDKK  GESRFPAQVRV+TRKICEPLEEDSFRPILHHYDGPKFRLELN+PEAISLLDIFEE
Sbjct:  129 EAASFGGTNIDPTAWEDKKNQGESRFPAQVRVMTRKICEPLEEDSFRPILHHYDGPKFRLELNIPEAISLLDIFEE 204

HSP 2 Score: 23.8682 bits (50), Expect = 1.339e-36
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = -3 
Query:  611 THQLHGIFE 637
            THQLHG+FE
Sbjct:  121 THQLHGVFE 129
The following BLAST results are available for this feature:
BLAST of CN185292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
B2_DAUCA1.339e-3693.42B2 protein OS=Daucus carota PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0001B20_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001B20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185292 ID=CN185292; Name=CN185292; organism=Citrus sinensis; type=EST; length=660bp
TTTTTTTTTTTTTTTTTCCAGAACCCTTTCATTGCATTCATCATATGCAA
ATAAAACCGGTATTCCTCCAGAACTTTAGATAAAGTCTTTATAATTTGCT
CTTATTTATGTATAAGCTAAAACAAAAGAACAAAAAGGACAACACACAAC
AACAGCCTCCTCACAAAATGTTTACGTCAGGGAGACTGGGCATATTCAGC
TCTCATACTTCCCCTCACATACTCTCTCTAAACTATCAATATAATGAAGG
CCACAAACTCTTAAATTCTTTCCCTATTTGTATCATCAAACCACTTTTAT
GCTGTGTAACTTCACTAACTGGTACTTGTATCTGTAAGCTTTTGTTTCAT
ATGGTTGTATTGCAGCAATTGCTCAAGAGTCTTGTTCTTCAAATATGTCC
AAGAGAGAAATTGCCTCAGGCACATTTAGTTCAAGGCGGAACTTGGGGCC
ATCATAGTGATGGAGAATTGGCCTGAAGGAATCCTCTTCAAGCGGTTCAC
AGATTTTCCGTGTAACAACCCGGACCTGAGCTGGGAATCGTGATTCGCCA
GGGCATTTCTTGTCTTCCCAGGCTGTAGGATCAATATTTGTGCCTCCAAA
GCTAGCAGCCTTCAAAAATTCCATGCAGCTGGTGGGTGGGAATAGTTATA
AAGGAAAAGG
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