CN185285

Overview
NameCN185285
Unique NameCN185285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12023 contig Csv1_Contig12023:24..720. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 2.724e-86
Identity = 146/194 (75.26%), Postives = 158/194 (81.44%), Query Frame = 1
Query:  115 GQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            G GW +AHATFY              YGNLYS+GYGTNTAALSTALFNNG+SCGACFEI+C ND +WC PGSI VTATNFC          GGWCNPPQQHFDLSQPVF++IAQY+AGIVPV+YRRVPC R+GGIRFTINGHSYFNLVLITNVGGAGDV +  +KGSRT WQ MSRNWGQNWQSNSYLNGQSLS
Sbjct:   24 GGGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGIVPVAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLS 217          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1)

HSP 1 Score: 313.153 bits (801), Expect = 8.764e-85
Identity = 143/195 (73.33%), Postives = 159/195 (81.54%), Query Frame = 1
Query:  112 YGQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            YG GW +AHATFY              YGNLYS+GYGT+TAALSTALFNNG+SCG+CFEI+C ND +WC PGSI VTATNFC          GGWCNPP +HFDL+QPVF++IAQY+AGIVPVSYRRVPC R+GGIRFTINGHSYFNLVLITNVGGAGDV + +IKGSRT WQ MSRNWGQNWQSNSYLNGQ+LS
Sbjct:   22 YGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVWQAMSRNWGQNWQSNSYLNGQALS 216          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 309.686 bits (792), Expect = 9.690e-84
Identity = 141/195 (72.31%), Postives = 156/195 (80.00%), Query Frame = 1
Query:  112 YGQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            Y  GW +AHATFY              YGNLYS+GYGTNTAALSTALFNNG+SCGACFEIKC +D  WC PG+I VTATNFC          GGWCNPP  HFDLSQPVF++IAQYKAG+VPVSYRRVPC R+GGIRFTINGHSYFNLVL+TNVGGAGDV +V++KGSRT WQ MSRNWGQNWQSN+ LNGQ+LS
Sbjct:   26 YDAGWVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCQSDGAWCLPGAIIVTATNFCPPNNALPNNAGGWCNPPLHHFDLSQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALS 220          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.226e-78
Identity = 136/193 (70.47%), Postives = 151/193 (78.24%), Query Frame = 1
Query:  121 GWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRT-DWQPMSRNWGQNWQSNSYLNGQSLS 696
            GW   HATFY              YGNLY +GYGTNTAALSTALFNNG++CGAC+E+KC +DPRWC   +I VTATNFC          GGWCNPP QHFDL++P F QIAQY+AGIVPVS+RRVPC +KGGIRFTINGHSYFNLVLI+NVGGAGDV AVSIKGS+T  WQ MSRNWGQNWQSNSY+N QSLS
Sbjct:   29 GWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQAMSRNWGQNWQSNSYMNDQSLS 221          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.226e-78
Identity = 135/195 (69.23%), Postives = 150/195 (76.92%), Query Frame = 1
Query:  112 YGQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            Y  GW +A ATFY              YGNLYS+GYGTNTAALSTALFN G SCGACF+IKCV+DP+WC  G+I VT TNFC          GGWCNPPQ HFDL+QP+F +IAQYKAG+VPV YRRV C RKGGIRFTINGHSYFNLVLITNV GAGDV +VSIKG+ T WQ MSRNWGQNWQSN+ L+GQ+LS
Sbjct:   25 YSSGWVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKCVDDPKWCIGGTITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAGVVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNWGQNWQSNAKLDGQALS 219          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.038e-77
Identity = 133/196 (67.86%), Postives = 150/196 (76.53%), Query Frame = 1
Query:  115 GQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGS--IFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            G  W +AHATFY              YGNLYS+GYGTNTAALSTALFNNGMSCGACFE+KC NDP+WC  GS  I +TATNFC          GGWCNPP++HFDL+ PVF +IAQY+AGIVPVSYRRVPC ++GGIRFTINGH YFNLVLITNV GAGD+   S+KGSRT W  +SRNWGQNWQSN+ L GQ+LS
Sbjct:   28 GGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALS 223          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 3.019e-77
Identity = 132/195 (67.69%), Postives = 153/195 (78.46%), Query Frame = 1
Query:  112 YGQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            YG GW  AHATFY              YGNLYS+GYGTNTAALSTALFN+G +CG+C+E++C N    C PGSI VTATNFC          GGWCNPP+ HFD+++P F  IAQY+AGIVPVS+RRVPC +KGG+RFT+NGHSYFNLVL+TNV GAGDVR+VSIKGSRT WQPMSRNWGQNWQSN++L+GQSLS
Sbjct:   21 YG-GWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLS 214          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 3.019e-77
Identity = 132/195 (67.69%), Postives = 153/195 (78.46%), Query Frame = 1
Query:  112 YGQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            YG GW  AHATFY              YGNLYS+GYGTNTAALSTALFN+G +CG+C+E++C N    C PGSI VTATNFC          GGWCNPP+ HFD+++P F  IAQY+AGIVPVS+RRVPC +KGG+RFT+NGHSYFNLVL+TNV GAGDVR+VSIKGSRT WQPMSRNWGQNWQSN++L+GQSLS
Sbjct:   21 YG-GWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLS 214          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 286.574 bits (732), Expect = 8.784e-77
Identity = 131/195 (67.18%), Postives = 149/195 (76.41%), Query Frame = 1
Query:  112 YGQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            YG  W  AHATFY              YGNLYS GYGTNTAALST LFN+G +CG+C+E++C ND +WC PGS+ VTATN C          GGWCNPP+ HFD+++P F QI  Y+AGIVPVSYRRVPC +KGGIRFTINGHSYFNLVL+TNV G GDV++VSIKGS T WQPMSRNWGQNWQSNSYL+GQSLS
Sbjct:   26 YGS-WQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTVLFNDGAACGSCYELRCDNDGQWCLPGSVTVTATNLCPPNYALPNDDGGWCNPPRPHFDMAEPAFLQIGVYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGPGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSYLDGQSLS 219          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 1.957e-76
Identity = 130/196 (66.33%), Postives = 148/196 (75.51%), Query Frame = 1
Query:  115 GQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPG--SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            G  W  AHATFY              YGNLYS+GYGTNTAALST+LFN+G SCGACFEIKCVNDP+WC PG  S+FVTATNFC          GGWCNPP+ HFDL+ PVF +IA+Y+AGIVP+SYRRV C + GGIRFTINGH YFNLVLITNV GAGD+   S+KGS+T W  ++RNWGQNWQSN+ L GQSLS
Sbjct:   31 GGSWQTAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLS 226          
The following BLAST results are available for this feature:
BLAST of CN185285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
EXPA1_ARATH2.724e-8675.26Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 ... [more]
EXP10_ARATH8.764e-8573.33Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=... [more]
EXP15_ARATH9.690e-8472.31Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=... [more]
EXPA8_ARATH1.226e-7870.47Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 ... [more]
EXP14_ARATH1.226e-7869.23Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=... [more]
EXPA4_ARATH1.038e-7767.86Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 ... [more]
EXPA4_ORYSJ3.019e-7767.69Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA4_ORYSI3.019e-7767.69Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4... [more]
EXPA2_ORYSJ8.784e-7767.18Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP16_ARATH1.957e-7666.33Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001B16_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001B16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185285 ID=CN185285; Name=CN185285; organism=Citrus sinensis; type=EST; length=696bp
ATGAGAACCTCTCTTTCTCTCTTAAAAAAGATACGCAAGCAAAAGGGTTT
CAGGAACATGGCATTTCTTGGGCTGCTGTTGTTGGGGATTCTTTCTTTAG
TCTCATCTGTTTATGGCCAGGGATGGACTGATGCTCATGCCACTTTTTAT
GGTGGGGGTGATGCCTCTGGTACAATGGGTGGCGCTTGTGGGTATGGAAA
CTTATACAGCGAGGGATATGGGACAAACACAGCAGCTCTGAGCACTGCGC
TTTTCAACAATGGCATGAGCTGTGGGGCTTGTTTTGAGATCAAGTGTGTT
AATGACCCAAGATGGTGCCGTCCGGGCTCCATTTTTGTTACTGCCACAAA
TTTTTGCCCTCCAAATAATGCTCTCCCAAACAATGCCGGTGGCTGGTGCA
ATCCTCCCCAGCAACATTTTGACCTCTCTCAGCCTGTGTTTGAACAAATT
GCTCAGTACAAAGCTGGGATAGTACCTGTGTCTTACAGAAGGGTTCCATG
CAGTAGGAAGGGAGGCATCAGATTCACGATCAACGGCCATTCTTACTTCA
ACTTAGTCCTAATCACAAACGTCGGAGGCGCTGGTGATGTGCGTGCTGTT
TCAATCAAAGGGTCAAGAACTGATTGGCAACCCATGTCAAGGAACTGGGG
TCAAAACTGGCAAAGTAACAGTTACCTCAATGGCCAAAGCCTCTCA
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