CN185224

Overview
NameCN185224
Unique NameCN185224
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185224 vs. ExPASy Swiss-Prot
Match: THIJ_SALTY (Protein thiJ OS=Salmonella typhimurium GN=thiJ PE=3 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 7.006e-29
Identity = 78/181 (43.09%), Postives = 107/181 (59.12%), Query Frame = -2
Query:  228 SPQILVPIANGSEEMEAVMIIDILRRAKANVVVASV--EDKLEILAFRQVKLVADVLIDEAAKLSYDLIVLPGGLGGAQAFAKSEKLVNMLEKQKESNRPYGAICASPTLVLEPHGLLKGKKATAFPVMCNKLSDQSEIENRVVVDG--NLITSRGPGTSMEFALAIVEKFFGRNKALELA 758
            S Q LV +A GSEE EAV  ID+L R   +V  ASV  +  L I+  R VKL+AD  + E A   YD+IVLPGG+ GA+ F  S  LV  +++   S R   AICA+   VL PH +      T FP + +K+  +  ++ RVV D    L+TS+GPGT+++F L I++   GR KA E+A
Sbjct:    2 SAQALVCLAPGSEETEAVTTIDLLVRGGIHVTTASVASDGNLTIVCSRGVKLLADAPLVEVADGDYDIIVLPGGIKGAECFRDSPLLVETVKQFHRSGRIVAAICAAAATVLVPHDIFPIGNMTGFPALKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLAGREKAHEVA 182          
BLAST of CN185224 vs. ExPASy Swiss-Prot
Match: THIJ_ECOLI (Protein thiJ OS=Escherichia coli (strain K12) GN=thiJ PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 7.006e-29
Identity = 78/181 (43.09%), Postives = 105/181 (58.01%), Query Frame = -2
Query:  228 SPQILVPIANGSEEMEAVMIIDILRRAKANVVVASV--EDKLEILAFRQVKLVADVLIDEAAKLSYDLIVLPGGLGGAQAFAKSEKLVNMLEKQKESNRPYGAICASPTLVLEPHGLLKGKKATAFPVMCNKLSDQSEIENRVVVDG--NLITSRGPGTSMEFALAIVEKFFGRNKALELA 758
            S   LV +A GSEE EAV  ID+L R    V  ASV  +  L I   R VKL+AD  + E A   YD+IVLPGG+ GA+ F  S  LV  +++   S R   AICA+P  VL PH +      T FP + +K+  +  ++ RVV D    L+TS+GPGT+++F L I++   GR KA E+A
Sbjct:    2 SASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHEVA 182          
BLAST of CN185224 vs. ExPASy Swiss-Prot
Match: PARK7_CHICK (Protein DJ-1 OS=Gallus gallus GN=PARK7 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.492e-26
Identity = 73/177 (41.24%), Postives = 104/177 (58.76%), Query Frame = -2
Query:  240 SPQILVPIANGSEEMEAVMIIDILRRAKANVVVASVEDKLEILAFRQVKLVADVLIDEAAKLS-YDLIVLPGGLGGAQAFAKSEKLVNMLEKQKESNRPYGAICASPTLVLEPHGLLKGKKATAFPVMCNKLSDQSEI---ENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKA 758
            S + LV +A G+EEME V+  D++RRA   V VA +  K  +   R V +  D  +++A K   YD+IVLPGG  GAQ  ++S  + ++L+ Q+       AICA PT +L  HG+  G K    P+  +K+ + +     E+RV  DGN++TSRGPGTS EF LAIVE   G+  A
Sbjct:    3 SKRALVILAKGAEEMETVIPTDVMRRAGIKVTVAGLTGKEPVQCSRDVLICPDASLEDARKEGPYDVIVLPGGNLGAQNLSESAAVKDILKDQESRKGLIAAICAGPTALLA-HGIGFGSKVITHPLAKDKMMNGAHYCYSESRVEKDGNILTSRGPGTSFEFGLAIVEALMGKEVA 178          
BLAST of CN185224 vs. ExPASy Swiss-Prot
Match: PARK7_HUMAN (Protein DJ-1 OS=Homo sapiens GN=PARK7 PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 3.254e-26
Identity = 73/180 (40.56%), Postives = 106/180 (58.89%), Query Frame = -2
Query:  231 SPQILVPIANGSEEMEAVMIIDILRRAKANVVVASVEDKLEILAFRQVKLVADVLIDEAAKLS-YDLIVLPGGLGGAQAFAKSEKLVNMLEKQKESNRPYGAICASPTLVLEPHGLLKGKKATAFPVMCNKLSDQSEI---ENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKALEL 758
            S + LV +A G+EEME V+ +D++RRA   V VA +  K  +   R V +  D  +++A K   YD++VLPGG  GAQ  ++S  +  +L++Q+       AICA PT +L  H +  G K T  P+  +K+ +       ENRV  DG ++TSRGPGTS EFALAIVE   G+  A ++
Sbjct:    3 SKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLA-HEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQV 181          
BLAST of CN185224 vs. ExPASy Swiss-Prot
Match: PARK7_BOVIN (Protein DJ-1 OS=Bos taurus GN=PARK7 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.254e-26
Identity = 74/177 (41.81%), Postives = 105/177 (59.32%), Query Frame = -2
Query:  240 SPQILVPIANGSEEMEAVMIIDILRRAKANVVVASVEDKLEILAFRQVKLVADVLIDEAAKLS-YDLIVLPGGLGGAQAFAKSEKLVNMLEKQKESNRPYGAICASPTLVLEPHGLLKGKKATAFPVMCNKL---SDQSEIENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKA 758
            S + LV +A G+EEME V+ +D++RRA   V VA +  K  +   R V +  D  +++A K   YD++VLPGG  GAQ  ++S  +  +L++Q++      AICA PT +L  H +  G K T  P+  +K+   S  S  ENRV  DG ++TSRGPGTS EFAL IVE   G+  A
Sbjct:    3 SKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQEKRKGLIAAICAGPTALLA-HEIGFGSKVTTHPLAKDKMMNGSHYSYSENRVEKDGLILTSRGPGTSFEFALKIVEVLVGKEVA 178          
BLAST of CN185224 vs. ExPASy Swiss-Prot
Match: PARK7_CERAE (Protein DJ-1 OS=Cercopithecus aethiops GN=PARK7 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.250e-26
Identity = 72/180 (40.00%), Postives = 106/180 (58.89%), Query Frame = -2
Query:  231 SPQILVPIANGSEEMEAVMIIDILRRAKANVVVASVEDKLEILAFRQVKLVADVLIDEAAKLS-YDLIVLPGGLGGAQAFAKSEKLVNMLEKQKESNRPYGAICASPTLVLEPHGLLKGKKATAFPVMCNKLSDQSEI---ENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKALEL 758
            S + LV +A G+EEME V+ +D++RRA   V +A +  K  +   R V +  D  +++A K   YD++VLPGG  GAQ  ++S  +  +L++Q+       AICA PT +L  H +  G K T  P+  +K+ +       ENRV  DG ++TSRGPGTS EFALAIVE   G+  A ++
Sbjct:    3 SKRALVILAKGAEEMETVIPVDVMRRAGIKVTIAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLA-HEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQV 181          
BLAST of CN185224 vs. ExPASy Swiss-Prot
Match: PARK7_MESAU (Protein DJ-1 OS=Mesocricetus auratus GN=PARK7 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.551e-26
Identity = 75/177 (42.37%), Postives = 104/177 (58.76%), Query Frame = -2
Query:  240 SPQILVPIANGSEEMEAVMIIDILRRAKANVVVASVEDKLEILAFRQVKLVADVLIDEAAKLS-YDLIVLPGGLGGAQAFAKSEKLVNMLEKQKESNRPYGAICASPTLVLEPHGLLKGKKATAFPVMCNKL---SDQSEIENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKA 758
            S + LV +A G+EEME V+ +DI+RRA   V VA +  K  +   R V +  D  +++A K   YD++VLPGG  GAQ  ++S  +  +L++Q+       AICA PT +L  H +  G K T  P   +K+   S  S  E+RV  DG ++TSRGPGTS EFALAIVE   G+  A
Sbjct:    3 SKRALVILAKGAEEMETVIPVDIMRRAGIKVTVAGLAGKDPVQCSRDVMICPDTSLEDAKKQGPYDVVVLPGGNLGAQNLSESPVVKEILKEQESRKGLIAAICAGPTALLA-HEIGFGSKVTTHPGAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIVEALSGKEAA 178          
BLAST of CN185224 vs. ExPASy Swiss-Prot
Match: PARK7_RAT (Protein DJ-1 OS=Rattus norvegicus GN=Park7 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.469e-26
Identity = 75/177 (42.37%), Postives = 106/177 (59.89%), Query Frame = -2
Query:  240 SPQILVPIANGSEEMEAVMIIDILRRAKANVVVASVEDKLEILAFRQVKLVADVLIDEAAKLS-YDLIVLPGGLGGAQAFAKSEKLVNMLEKQKESNRPYGAICASPTLVLEPHGLLKGKKATAFPVMCNKL---SDQSEIENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKA 758
            S + LV +A G+EEME V+ +DI+RRA   V VA +  K  +   R V +  D  ++EA     YD++VLPGG  GAQ  ++S  +  +L++Q+       AICA PT +L  H +  G K T+ P+  +K+   S  S  E+RV  DG ++TSRGPGTS EFALAIVE   G++ A
Sbjct:    3 SKRALVILAKGAEEMETVIPVDIMRRAGIKVTVAGLAGKDPVQCSRDVVICPDTSLEEAKTQGPYDVVVLPGGNLGAQNLSESALVKEILKEQENRKGLIAAICAGPTALLA-HEVGFGCKVTSHPLAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIVEALSGKDMA 178          
BLAST of CN185224 vs. ExPASy Swiss-Prot
Match: PARK7_DANRE (Protein DJ-1 OS=Danio rerio GN=park7 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.469e-26
Identity = 72/176 (40.91%), Postives = 102/176 (57.95%), Query Frame = -2
Query:  231 LVPIANGSEEMEAVMIIDILRRAKANVVVASVEDKLEILAFRQVKLVADVLIDEAAKLS-YDLIVLPGGLGGAQAFAKSEKLVNMLEKQKESNRPYGAICASPTLVLEPHGLLKGKKATAFPVMCNKLSDQSEI---ENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKALEL 746
            LV +A G+EEME V+ +D++RRA   V VA +  K  +   R+V +  D  +++A K   YD+++LPGGL GAQ  ++S  +  +L+ Q+       AICA PT +L  HG+  G   T  P   +K+         E RV  DGN+ITSRGPGTS EFAL IVE+  G   A ++
Sbjct:    7 LVILAKGAEEMETVIPVDVMRRAGIAVTVAGLAGKEPVQCSREVMICPDSSLEDAHKQGPYDVVLLPGGLLGAQNLSESPAVKEVLKDQEGRKGLIAAICAGPTALLA-HGIAYGSTVTTHPGAKDKMMAGDHYKYSEARVQKDGNVITSRGPGTSFEFALTIVEELMGAEVAAQV 181          
BLAST of CN185224 vs. ExPASy Swiss-Prot
Match: PARK7_MOUSE (Protein DJ-1 OS=Mus musculus GN=Park7 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.615e-25
Identity = 73/177 (41.24%), Postives = 105/177 (59.32%), Query Frame = -2
Query:  240 SPQILVPIANGSEEMEAVMIIDILRRAKANVVVASVEDKLEILAFRQVKLVADVLIDEAAKLS-YDLIVLPGGLGGAQAFAKSEKLVNMLEKQKESNRPYGAICASPTLVLEPHGLLKGKKATAFPVMCNKL---SDQSEIENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKA 758
            S + LV +A G+EEME V+ +D++RRA   V VA +  K  +   R V +  D  +++A     YD++VLPGG  GAQ  ++S  +  +L++Q+       AICA PT +L  H +  G K T  P+  +K+   S  S  E+RV  DG ++TSRGPGTS EFALAIVE   G++ A
Sbjct:    3 SKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVMICPDTSLEDAKTQGPYDVVVLPGGNLGAQNLSESPMVKEILKEQESRKGLIAAICAGPTALLA-HEVGFGCKVTTHPLAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIVEALVGKDMA 178          
The following BLAST results are available for this feature:
BLAST of CN185224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
THIJ_SALTY7.006e-2943.09Protein thiJ OS=Salmonella typhimurium GN=thiJ PE=... [more]
THIJ_ECOLI7.006e-2943.09Protein thiJ OS=Escherichia coli (strain K12) GN=t... [more]
PARK7_CHICK2.492e-2641.24Protein DJ-1 OS=Gallus gallus GN=PARK7 PE=2 SV=1[more]
PARK7_HUMAN3.254e-2640.56Protein DJ-1 OS=Homo sapiens GN=PARK7 PE=1 SV=2[more]
PARK7_BOVIN3.254e-2641.81Protein DJ-1 OS=Bos taurus GN=PARK7 PE=2 SV=1[more]
PARK7_CERAE4.250e-2640.00Protein DJ-1 OS=Cercopithecus aethiops GN=PARK7 PE... [more]
PARK7_MESAU5.551e-2642.37Protein DJ-1 OS=Mesocricetus auratus GN=PARK7 PE=1... [more]
PARK7_RAT9.469e-2642.37Protein DJ-1 OS=Rattus norvegicus GN=Park7 PE=1 SV... [more]
PARK7_DANRE9.469e-2640.91Protein DJ-1 OS=Danio rerio GN=park7 PE=2 SV=1[more]
PARK7_MOUSE1.615e-2541.24Protein DJ-1 OS=Mus musculus GN=Park7 PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0001A03_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185224 ID=CN185224; Name=CN185224; organism=Citrus sinensis; type=EST; length=831bp
GGGGGGGGGGGTGGAGGGACTCTCTTTTTTTTTTTTAAATGACTATGAAC
TCATTTATTTATAAACGAACTGTTGCTTTAACCCGCACAGTGAATCCATA
TTCAAACACGAATTCAAGTTTCCATTTCCACTCTCTACAAGCAGTAGTAA
TACAGAAATAAATACTCTAGTTTAATAGTAGGCAGGTTTCCGTAAAAACT
TTAGGTGCGAGTGAAAAGCATTATCTTTGCAAGCTCAAGCGCTTTGTTGC
GGCCAAAAAACTTCTCCACAATTGCCAGTGCAAACTCCATAGAAGTTCCT
GGCCCTCTGCTGGTGATAAGGTTGCCATCAACCACAACCCTGTTTTCGAT
TTCACTCTGATCTGACAGCTTGTTGCACATGACAGGAAAAGCTGTAGCTT
TTTTACCCTTGAGTAAGCCATGGGGCTCCAACACTAAAGTTGGGGATGCA
CATATAGCACCGTAAGGTCTATTTGATTCCTTTTGCTTCTCTAGCATATT
CACCAATTTCTCTGACTTCGCAAATGCTTGAGCGCCACCAAGTCCACCTG
GCAAGACAATTAAATCATACGAAAGTTTAGCTGCCTCATCAATGAGCACA
TCTGCCACTAATTTAACTTGACGAAAAGCCAGAATTTCTAGTTTATCCTC
AACCGATGCAACCACAACGTTTGCTTTAGCTCGTCGCAGAATATCAATTA
TCATAACAGCTTCCATCTCCTCTGAACCATTCGCAATAGGCACAAGAATC
TGGGGAGAATTGTCAAATGTCCACTGAATTGGATTGAACTCAGCAATAGT
GTATTCATCCTCATGATTTGCACGCATTACC
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