CN185213

Overview
NameCN185213
Unique NameCN185213
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length548
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185213 vs. ExPASy Swiss-Prot
Match: M3K12_MOUSE (Mitogen-activated protein kinase kinase kinase 12 OS=Mus musculus GN=Map3k12 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.490e-18
Identity = 45/94 (47.87%), Postives = 63/94 (67.02%), Query Frame = -1
Query:  267 APELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSA 548
            APE++   +  VSEKVD++SFG+VLWE+LTGE PY ++   AII G+ +N+L  PVP  C   +++L+ QCW   P  RPSF +I   L + SA
Sbjct:  311 APEVIR--NEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSSCPDGFKILLRQCWNSKPRNRPSFRQILLHLDIASA 402          
BLAST of CN185213 vs. ExPASy Swiss-Prot
Match: M3K12_HUMAN (Mitogen-activated protein kinase kinase kinase 12 OS=Homo sapiens GN=MAP3K12 PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 1.490e-18
Identity = 45/94 (47.87%), Postives = 63/94 (67.02%), Query Frame = -1
Query:  267 APELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSA 548
            APE++   +  VSEKVD++SFG+VLWE+LTGE PY ++   AII G+ +N+L  PVP  C   +++L+ QCW   P  RPSF +I   L + SA
Sbjct:  278 APEVIR--NEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSSCPDGFKILLRQCWNSKPRNRPSFRQILLHLDIASA 369          
BLAST of CN185213 vs. ExPASy Swiss-Prot
Match: M3K12_RAT (Mitogen-activated protein kinase kinase kinase 12 OS=Rattus norvegicus GN=Map3k12 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.945e-18
Identity = 45/94 (47.87%), Postives = 63/94 (67.02%), Query Frame = -1
Query:  267 APELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSA 548
            APE++   +  VSEKVD++SFG+VLWE+LTGE PY ++   AII G+ +N+L  PVP  C   +++L+ QCW   P  RPSF +I   L + SA
Sbjct:  311 APEVIR--NEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSSCPDGFKILLRQCWNRKPRNRPSFRQILLHLDIASA 402          
BLAST of CN185213 vs. ExPASy Swiss-Prot
Match: M313A_XENLA (Mitogen-activated protein kinase kinase kinase 13-A OS=Xenopus laevis GN=map3k13-A PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.261e-17
Identity = 44/94 (46.81%), Postives = 63/94 (67.02%), Query Frame = -1
Query:  267 APELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSA 548
            APE++   +  VSEKVD++SFG++LWE+LTGE PY ++   AII G+ +N+L  PVP  C   +++LM+Q W   P  RPSF +I   L + SA
Sbjct:  322 APEVIR--NEPVSEKVDIWSFGVLLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKILMKQTWHSKPRNRPSFRQILMHLDIASA 413          
BLAST of CN185213 vs. ExPASy Swiss-Prot
Match: M3K13_PONAB (Mitogen-activated protein kinase kinase kinase 13 OS=Pongo abelii GN=MAP3K13 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.647e-17
Identity = 44/94 (46.81%), Postives = 62/94 (65.96%), Query Frame = -1
Query:  267 APELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSA 548
            APE++   +  VSEKVD++SFG+VLWE+LTGE PY ++   AII G+ +N+L  PVP  C   +++LM+Q W   P  RPSF +    L + SA
Sbjct:  321 APEVIR--NEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKILMKQTWQSKPRNRPSFRQTLMHLDIASA 412          
BLAST of CN185213 vs. ExPASy Swiss-Prot
Match: M3K13_MOUSE (Mitogen-activated protein kinase kinase kinase 13 OS=Mus musculus GN=Map3k13 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.647e-17
Identity = 44/94 (46.81%), Postives = 62/94 (65.96%), Query Frame = -1
Query:  267 APELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSA 548
            APE++   +  VSEKVD++SFG+VLWE+LTGE PY ++   AII G+ +N+L  PVP  C   +++LM+Q W   P  RPSF +    L + SA
Sbjct:  320 APEVIR--NEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKILMKQTWQSKPRNRPSFRQTLMHLDIASA 411          
BLAST of CN185213 vs. ExPASy Swiss-Prot
Match: M3K13_HUMAN (Mitogen-activated protein kinase kinase kinase 13 OS=Homo sapiens GN=MAP3K13 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.647e-17
Identity = 44/94 (46.81%), Postives = 62/94 (65.96%), Query Frame = -1
Query:  267 APELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSA 548
            APE++   +  VSEKVD++SFG+VLWE+LTGE PY ++   AII G+ +N+L  PVP  C   +++LM+Q W   P  RPSF +    L + SA
Sbjct:  321 APEVIR--NEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKILMKQTWQSKPRNRPSFRQTLMHLDIASA 412          
BLAST of CN185213 vs. ExPASy Swiss-Prot
Match: M313B_XENLA (Mitogen-activated protein kinase kinase kinase 13-B OS=Xenopus laevis GN=map3k13-B PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.151e-17
Identity = 43/94 (45.74%), Postives = 63/94 (67.02%), Query Frame = -1
Query:  267 APELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSA 548
            APE++   +  VSEKVD++SFG++LWE+LTGE PY ++   AII G+ +N+L  PVP  C   +++LM+Q W   P  RPSF +I   L + +A
Sbjct:  324 APEVIR--NEPVSEKVDIWSFGVLLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKILMKQTWQSKPRNRPSFRQILMHLDIAAA 415          
BLAST of CN185213 vs. ExPASy Swiss-Prot
Match: M3K13_BOVIN (Mitogen-activated protein kinase kinase kinase 13 OS=Bos taurus GN=MAP3K13 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.394e-16
Identity = 43/94 (45.74%), Postives = 61/94 (64.89%), Query Frame = -1
Query:  267 APELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSA 548
            APE++   +  VSEKVD++SFG+VLWE+LTGE PY ++   AII G+ +N+L  PVP  C   +++LM+Q W      RPSF +    L + SA
Sbjct:  321 APEVIR--NEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKILMKQTWQSKTRNRPSFRQTLMHLDIASA 412          
BLAST of CN185213 vs. ExPASy Swiss-Prot
Match: PYK2_DICDI (Dual specificity protein kinase pyk2 OS=Dictyostelium discoideum GN=splB PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 1.821e-16
Identity = 40/92 (43.48%), Postives = 56/92 (60.87%), Query Frame = -1
Query:  270 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMS 545
            P  L  +    SEKVDV+ F +V+WEILTGE P++++        +    LRPP+P +CD E +LL+ QCW  DP  RP FT I  +L+ +S
Sbjct: 1022 PPELTKNLGHYSEKVDVYCFSLVVWEILTGEIPFSDLDGSQASAQVAYAGLRPPIPEYCDPELKLLLTQCWEADPNDRPPFTYIVNKLKEIS 1113          
The following BLAST results are available for this feature:
BLAST of CN185213 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
M3K12_MOUSE1.490e-1847.87Mitogen-activated protein kinase kinase kinase 12 ... [more]
M3K12_HUMAN1.490e-1847.87Mitogen-activated protein kinase kinase kinase 12 ... [more]
M3K12_RAT1.945e-1847.87Mitogen-activated protein kinase kinase kinase 12 ... [more]
M313A_XENLA1.261e-1746.81Mitogen-activated protein kinase kinase kinase 13-... [more]
M3K13_PONAB1.647e-1746.81Mitogen-activated protein kinase kinase kinase 13 ... [more]
M3K13_MOUSE1.647e-1746.81Mitogen-activated protein kinase kinase kinase 13 ... [more]
M3K13_HUMAN1.647e-1746.81Mitogen-activated protein kinase kinase kinase 13 ... [more]
M313B_XENLA2.151e-1745.74Mitogen-activated protein kinase kinase kinase 13-... [more]
M3K13_BOVIN1.394e-1645.74Mitogen-activated protein kinase kinase kinase 13 ... [more]
PYK2_DICDI1.821e-1643.48Dual specificity protein kinase pyk2 OS=Dictyostel... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006P20_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006P20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185213 ID=CN185213; Name=CN185213; organism=Citrus sinensis; type=EST; length=548bp
TTTTTTTTTTTTTTTTTAGCTTTACACATGAACCAATTACTTTCAGTATT
TGCACAAAACACAATCATATATTACCCTCTCAACGGTGGGCAACTTCTCA
CCACTCTCTATAACATACACACTTTCATGAAATATATAGAAGCAAACAAC
TCTAATCATCGCATCTCATAAAGGTCAAAAGAAGCATCATTAGGGAGTCA
TGGAGTTGGCCATCACTTGGGCACCTGGTTTTGCACCTGATGACCGTGTG
ATTTAGTTTGGCATGCTGCAGACATCACACGCAAGCGTCTGGCAATCTCT
GTAAATGATGGGCGGACCACTGGATCAGGGGCCCAACACTGTTCCATTAG
CAATCTCCATTCTGAGTCACAGAAGCCCGGCACAGGTGGCCTCAATGTGT
TGTTGACAATACCTCCTATGATTGCTCCATAATGCATATTGGCATAAGGC
TCCTCACCAGTGAGAATCTCCCATAGGACAATACCAAAAGAGAACACATC
AACCTTTTCTGACACCTTACTGCTGCTACCATTCAAAAGCTCTGGAGC
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