CN185206

Overview
NameCN185206
Unique NameCN185206
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length729
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185206 vs. ExPASy Swiss-Prot
Match: YFV5_SCHPO (Putative glycosyltransferase C1834.05 OS=Schizosaccharomyces pombe GN=SPAC1834.05 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.094e-25
Identity = 55/123 (44.72%), Postives = 78/123 (63.41%), Query Frame = 2
Query:  281 FVPVFA-LGMLRYMSATTNIIHDCDEVFNYWEPLHYLLYKSGFQTWEYSSEFALRSYLYILFHELVGRPASWLFAEDKVRVFYAVRLFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLN 646
            FV  F+ L +LR  SA+  +I DCDEV+NYWEPLHYLLY  G QTWEYS E+A+RS+ YI  H + G  A  L    ++ VFY +R  L   S   +  L++A++R + R +A +  ++L +N
Sbjct:   14 FVWTFSILAVLRLTSASFRVIDDCDEVYNYWEPLHYLLYGYGLQTWEYSPEYAIRSWFYIALHAVPGFLARGL-GLSRLHVFYFIRGVLACFSAFCETNLILAVARNFNRAVALHLTSVLFVN 135          

HSP 2 Score: 31.9574 bits (71), Expect = 1.094e-25
Identity = 15/23 (65.22%), Postives = 19/23 (82.61%), Query Frame = 3
Query:  648 SGCFFASTSFLPSSFSMYAISLA 716
            SG + ASTSFLPSSF+M  ++LA
Sbjct:  136 SGMWSASTSFLPSSFAMNMVTLA 158          
BLAST of CN185206 vs. ExPASy Swiss-Prot
Match: ALG9_MOUSE (Alpha-1,2-mannosyltransferase ALG9 OS=Mus musculus GN=Alg9 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.783e-20
Identity = 49/124 (39.52%), Postives = 69/124 (55.65%), Query Frame = 2
Query:  311 RYMSATTNIIHDCDEVFNYWEPLHYLLYKSGFQTWEYSSEFALRSYLYILFHELVGRPASWLFAEDKVRVFYAVRLFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLN*WLFLC*HKFPP 682
            R  +A  + I DCDE FNYWEP HYL+Y  GFQTWEYS  +A+RSY Y+L H       + +   +K+ VFY +R  L  +S   +     A+ +K+G  ++   LA L L+  +F     F P
Sbjct:   69 RLCAALLSNISDCDETFNYWEPTHYLIYGKGFQTWEYSPVYAIRSYAYLLLHAWPAAFHARILQTNKILVFYFLRCLLAFVSCVCELYFYKAVCKKFGLHVSRMMLAFLVLSTGMFCSSSAFLP 192          
BLAST of CN185206 vs. ExPASy Swiss-Prot
Match: ALG9_HUMAN (Alpha-1,2-mannosyltransferase ALG9 OS=Homo sapiens GN=ALG9 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.783e-20
Identity = 49/124 (39.52%), Postives = 69/124 (55.65%), Query Frame = 2
Query:  311 RYMSATTNIIHDCDEVFNYWEPLHYLLYKSGFQTWEYSSEFALRSYLYILFHELVGRPASWLFAEDKVRVFYAVRLFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLN*WLFLC*HKFPP 682
            R  +A  + I DCDE FNYWEP HYL+Y  GFQTWEYS  +A+RSY Y+L H       + +   +K+ VFY +R  L  +S   +     A+ +K+G  ++   LA L L+  +F     F P
Sbjct:   69 RLCAALLSNISDCDETFNYWEPTHYLIYGEGFQTWEYSPAYAIRSYAYLLLHAWPAAFHARILQTNKILVFYFLRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLSTGMFCSSSAFLP 192          
BLAST of CN185206 vs. ExPASy Swiss-Prot
Match: YTH3_CAEEL (Putative glycosyltransferase C14A4.3 OS=Caenorhabditis elegans GN=C14A4.3 PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 6.854e-19
Identity = 48/125 (38.40%), Postives = 67/125 (53.60%), Query Frame = 2
Query:  308 LRYMSATTNIIHDCDEVFNYWEPLHYLLYKSGFQTWEYSSEFALRSYLYILFHELVGRPASWLFAEDKVRVFYAVRLFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLN*WLFLC*HKFPP 682
            +R   A   II+DCDEV+NYWEPLH  LY  GFQTWEYS  +A+RSY YI  H +     + LF + K+ VF  +RL +GL  +  +     A+ +K       + +     +  +FL    F P
Sbjct:   63 IRISGAIWGIINDCDEVYNYWEPLHLFLYGEGFQTWEYSPVYAIRSYFYIYLHYIPASLFANLFGDTKIVVFTLIRLTIGLFCLLGEYYAFDAICKKINIATGRFFILFSIFSSGMFLASTAFVP 187          
The following BLAST results are available for this feature:
BLAST of CN185206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
YFV5_SCHPO1.094e-2544.72Putative glycosyltransferase C1834.05 OS=Schizosac... [more]
ALG9_MOUSE2.783e-2039.52Alpha-1,2-mannosyltransferase ALG9 OS=Mus musculus... [more]
ALG9_HUMAN2.783e-2039.52Alpha-1,2-mannosyltransferase ALG9 OS=Homo sapiens... [more]
YTH3_CAEEL6.854e-1938.40Putative glycosyltransferase C14A4.3 OS=Caenorhabd... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0006P12_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006P12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185206 ID=CN185206; Name=CN185206; organism=Citrus sinensis; type=EST; length=729bp
ACTAAGTGGGATCCCCTCGGGCTGCAGGAAAAAGACCCCTAATACAAACT
TCTGGGTCGAAGCAACGAATCATCTAAAGACAGTCCGCATTTCATTTCTC
TCTCAATCATTTCCACAAACAATTAGACAGGGAGAAACGATGGCTCTAAC
GACGCGGCAGAGGCGGCCGCTACCGTCGGATCCTCCGCCATCATCGCCGA
TATACACGAAATACGACAAGCCGTCGAGGCGATTGGGCGACGGCGACGGC
GGACGCGAAGAGGAGAAGTCACTGGGGTGGTTCGTGCCGGTATTCGCATT
GGGAATGCTTCGATACATGAGCGCTACGACGAACATCATTCACGACTGCG
ACGAGGTGTTCAATTACTGGGAGCCCCTTCATTACTTGCTCTATAAATCT
GGCTTCCAGACTTGGGAGTACAGTTCAGAGTTTGCTCTTCGGTCATATTT
GTACATTCTTTTTCATGAATTAGTGGGTCGACCAGCTTCCTGGTTGTTTG
CTGAGGATAAAGTGAGAGTATTCTATGCAGTGAGGCTCTTTCTTGGTCTC
CTTTCTGTTACCACAGATGCTGTTCTGGTAGTAGCCCTTTCCAGAAAATA
TGGCAGGCGTTTAGCCTCTTATACACTGGCAATGCTATGCTTAAACTAGT
GGTTGTTTCTTTGCTAGCACAAGTTTCCTCCCTAGCTCCTTCTCCATGTA
TGCTATCAGTCTTGCTTCGGGATTTTTTT
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