CN185199

Overview
NameCN185199
Unique NameCN185199
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length687
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7093 contig Csv1_Contig7093:412..1097. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185199 vs. ExPASy Swiss-Prot
Match: ASOL_BRANA (L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.232e-59
Identity = 117/218 (53.67%), Postives = 150/218 (68.81%), Query Frame = 2
Query:    8 GPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGG-VFRIGSISDNPTGGGIYQ---DTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVL 649
            GP S  +P GP V   WSLNQ RS R NLTAS  RPNPQGSYHYG IN T+TI+L ++ G+V+GK R+A+N VS    +TPLKLA+YF I   VF+  +I+D+PT   I     +  V+   +R F+E+VF+N E  +QS+HL+GY F+ V ++ G WT   R  YNL DAV+R TVQVYPK W+AI +  DN GMWN+RSE+  R+YLGQQ Y  VL
Sbjct:  304 GPASSQLPAGP-VGWAWSLNQFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLVNTQGKVDGKLRFALNGVSHTEPETPLKLAEYFGISDKVFKYDTITDDPTPEQIKNIKIEPNVLNITHRTFVEVVFENHEKSVQSWHLDGYSFFSVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKCWAAILLTFDNCGMWNVRSENTERRYLGQQLYASVL 520          
BLAST of CN185199 vs. ExPASy Swiss-Prot
Match: ASOL_TOBAC (L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.657e-54
Identity = 106/220 (48.18%), Postives = 138/220 (62.73%), Query Frame = 2
Query:    8 GPVSGPIPGGP---TVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYF-KIGGVFRIGSISDNPTG--GGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVL 649
            GP S  +P  P   T  I WS+NQ RS R NLTAS  RPNPQGSYHYG IN T+TI++ +S  QV GK RY +N +S    +TPLKL +YF      F+   ++D        +   T V  A YR F+EI+F+N E  I++YHL+GY F+ V ++ G+W+   R  YNL D ++R  +QVYP SW+AI +  DN GMWNLRSE W + YLG+Q Y  VL
Sbjct:  302 GPASPELPTPPPENTEGIAWSMNQFRSFRWNLTASAARPNPQGSYHYGQINITRTIKIFNSMSQVGGKLRYGLNGISHTNGETPLKLVEYFGATNKAFKYDLMADEAPADPSKLTIATNVKNATYRNFVEIIFENHEKTIRTYHLDGYSFFAVAVEPGRWSPEKRKNYNLVDGLSRNNIQVYPNSWAAIMLTFDNAGMWNLRSEMWEKTYLGEQLYFSVL 521          
BLAST of CN185199 vs. ExPASy Swiss-Prot
Match: SKS2_ARATH (Monocopper oxidase-like protein SKS2 OS=Arabidopsis thaliana GN=SKS2 PE=1 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.592e-51
Identity = 101/219 (46.12%), Postives = 149/219 (68.04%), Query Frame = 2
Query:    8 GPVSGPIPGGPT-VQIDWS-LNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSS-SAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQ-DTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVLH 652
            GP SGP+P   T V   WS +NQ R+I+ N +ASG RPNPQGS+HYG IN T+T  L S    ++NGK R  +N +SF+   TP++LAD  K+ G + +    D P    + +  ++++ A Y+ FI+++FQN++  IQS+H++GY F+VV MD G W+    + YN  DAVAR TV+VYP +W+A+ I+LDNVG+WN+R E+  R YLGQ+ Y+R+++
Sbjct:  315 GPASGPLPVSATDVNHPWSAMNQPRAIKQNTSASGARPNPQGSFHYGQINITRTYILRSLPPTKINGKLRATLNGISFVNPSTPMRLADDHKVKGDYML-DFPDRPLDEKLPRLSSSIINATYKGFIQVIFQNNDTKIQSFHIDGYAFYVVAMDFGIWSEDRNSSYNNWDAVARSTVEVYPGAWTAVLISLDNVGVWNIRVENLDRWYLGQETYMRIIN 532          
BLAST of CN185199 vs. ExPASy Swiss-Prot
Match: SKU5_ARATH (Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.691e-51
Identity = 102/218 (46.79%), Postives = 143/218 (65.60%), Query Frame = 2
Query:    8 GPVSGPIPGGPTVQID--WSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAG-QVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVLH 652
            G   G +P GP  + D  +S+NQARSIR N++ASG RPNPQGS+ YG IN T    L +     ++GK+R  +N +SF    TP++LAD  K+  V+++      P  G     T+++   YR F+E+V QN++  +QSYH++GY F+VVGMD G+WT  SR  YN  D +AR T+QVYP +WSAI I+LDN G WNLR+E+    YLGQ+ Y+RV++
Sbjct:  313 GKAKGQLPPGPQDEFDKTFSMNQARSIRWNVSASGARPNPQGSFKYGSINVTDVYVLRNMPPVTISGKRRTTLNGISFKNPSTPIRLADKLKVKDVYKL-DFPKRPLTGPAKVATSIINGTYRGFMEVVLQNNDTKMQSYHMSGYAFFVVGMDYGEWTENSRGTYNKWDGIARSTIQVYPGAWSAILISLDNPGAWNLRTENLDSWYLGQETYVRVVN 529          
BLAST of CN185199 vs. ExPASy Swiss-Prot
Match: SKS1_ARATH (Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana GN=SKS1 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.691e-51
Identity = 99/216 (45.83%), Postives = 145/216 (67.13%), Query Frame = 2
Query:    8 GPVSGPIPGGPT-VQIDWS-LNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQV-NGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRV 646
            GPVSGP+P   T V   WS ++Q ++IR N +ASG RPNPQGS+HYG IN T T  L S    + NG  R  +N +SF+   TP++LAD  K+ G +++    D P    +  D +++ A Y+ FI++VFQN++  IQS+H++GY F+VVGMD G W+   +  YN  DA++R T++VYP  W+A+ I+LDNVG+WN+R E+  R YLG++ Y+R+
Sbjct:  316 GPVSGPLPVPKTDVSSPWSAMSQPKTIRQNTSASGARPNPQGSFHYGQINITNTYILRSLPPTIINGALRATLNGISFVNPSTPVRLADRNKVKGAYKL-DFPDRPFNRPLRLDRSMINATYKGFIQVVFQNNDTKIQSFHVDGYSFFVVGMDFGIWSEDKKGSYNNWDAISRSTIEVYPGGWTAVLISLDNVGVWNIRVENLDRWYLGEETYMRI 530          
BLAST of CN185199 vs. ExPASy Swiss-Prot
Match: ASO_TOBAC (L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11
Identity = 49/197 (24.87%), Postives = 87/197 (44.16%), Query Frame = 2
Query:   65 NQARSIRSNLTA--SGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFI---------------PADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQN------DEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 586
            N ++S  + + A    P+P PQ      L+NT           +++G  ++AIN+VS +                 DT     ++ K   V +    S++  G G+Y         +   I+I+ QN      D   I  +HL+G+ FWV+G   G+++     ++NL++   R T  ++P  W+A+    DN G+W
Sbjct:  349 NHSKSFSNKIFALMGSPKPPPQNHRRIILLNTQN---------KIDGYTKWAINNVSLVLPTQLYLGSIRYGINAFDTKPPPDNFPKDYDVLKQAPNSNSTYGNGVYM------LKFNTTIDIILQNANALAKDVSEIHPWHLHGHDFWVLGYGEGKFSEKDVKKFNLKNPPLRNTAVIFPFGWTALRFVTDNPGVW 530          
BLAST of CN185199 vs. ExPASy Swiss-Prot
Match: ASO_CUCMA (L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11
Identity = 50/196 (25.51%), Postives = 86/196 (43.88%), Query Frame = 2
Query:   65 NQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIG----------SISDNPT------GGGIYQDTAVMGADYRAFIEIVFQNDEDI------IQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 586
            +++++    +TA+   P P        + + + I L ++   +NG  ++AIN VS     TP   A  F +   F              I   PT      G G+YQ            ++++ QN   +      I  +HL+G+ FWV+G   G++T+   +  NL++   R TV ++P  W+AI    DN G+W
Sbjct:  351 DRSKNFTYRITAAMGSPKPP-------VKSNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKFNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTKIGNGVYQ------FKIGEIVDVILQNANMMKENLSEIHPWHLHGHDFWVLGYGDGKFTAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVW 533          
The following BLAST results are available for this feature:
BLAST of CN185199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
ASOL_BRANA1.232e-5953.67L-ascorbate oxidase homolog OS=Brassica napus GN=B... [more]
ASOL_TOBAC2.657e-5448.18L-ascorbate oxidase homolog OS=Nicotiana tabacum P... [more]
SKS2_ARATH3.592e-5146.12Monocopper oxidase-like protein SKS2 OS=Arabidopsi... [more]
SKU5_ARATH4.691e-5146.79Monocopper oxidase-like protein SKU5 OS=Arabidopsi... [more]
SKS1_ARATH4.691e-5145.83Monocopper oxidase-like protein SKS1 OS=Arabidopsi... [more]
ASO_TOBAC3.633e-1124.87L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE... [more]
ASO_CUCMA3.633e-1125.51L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0006P06_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006P06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185199 ID=CN185199; Name=CN185199; organism=Citrus sinensis; type=EST; length=687bp
GAGGGCAGGTCCAGTTTCAGGCCCCATCCCAGGTGGACCAACTGTCCAAA
TTGACTGGTCACTAAACCAAGCACGCTCTATCAGGTCTAATCTCACAGCA
AGTGGACCAAGGCCTAACCCACAGGGTTCATACCACTATGGTCTCATAAA
CACTACCAAAACTATCAGGCTTTCAAGTTCTGCTGGGCAAGTTAATGGCA
AGCAGAGATATGCAATCAACAGCGTGTCCTTTATTCCAGCTGACACTCCC
CTAAAGCTTGCTGACTACTTCAAGATTGGAGGAGTTTTCCGCATCGGAAG
CATTTCTGATAATCCTACCGGTGGAGGGATTTACCAAGACACAGCAGTTA
TGGGGGCTGACTACAGAGCTTTTATTGAAATTGTGTTCCAAAATGATGAA
GACATTATCCAGAGCTATCACCTTAATGGCTACCAATTTTGGGTTGTCGG
TATGGATGGAGGCCAATGGACATCTGCTAGTAGAAACCAGTACAATCTCC
GCGATGCAGTTGCCCGTGTAACCGTTCAGGTGTATCCCAAGTCATGGTCT
GCGATTTATATAGCACTGGATAACGTAGGTATGTGGAACTTGAGGTCTGA
GTCTTGGGCACGACAGTACCTTGGACAACAATTTTACTTGCGTGTTTTAC
ACAGCATCAACTTCACTCAGGGATGAAATATCCCATC
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