CN185198
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185198 vs. ExPASy Swiss-Prot
Match: GDAP2_DROPS (Protein GDAP2 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA15091 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.797e-20 Identity = 48/146 (32.88%), Postives = 80/146 (54.79%), Query Frame = -3 Query: 316 VYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFEPLIQKPYSIVYFHSAASLQLQPDLGWMRRLQQVLGRKHQRNLHAIYVLHPTFHLKATIFTLQLLXXXXXXXXXXXXDRLLQLFRYVPREQLTIPDFVFQHDLEVNG 753 +Y+ GVD GRPV+V G F + +DLE+ +LY++K +P+++ Y I YFH+ S P L W+R + VL K+++NL A Y++HPTF K + + L+ + ++QL IP ++ ++D+ NG Sbjct: 386 LYQSGVDRLGRPVIVFCGKWFPAQNIDLEKALLYLIKLLDPIVKGDYVISYFHTLTSTNNYPSLHWLREVYSVLPYKYKKNLKAFYIVHPTFWTKMMTWWFTTFMAPAIKAKVHSLPGVEHLYSAITKDQLEIPAYITEYDMATNG 531
BLAST of CN185198 vs. ExPASy Swiss-Prot
Match: GDAP2_DROME (Protein GDAP2 homolog OS=Drosophila melanogaster GN=CG18812 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.797e-20 Identity = 48/146 (32.88%), Postives = 80/146 (54.79%), Query Frame = -3 Query: 316 VYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFEPLIQKPYSIVYFHSAASLQLQPDLGWMRRLQQVLGRKHQRNLHAIYVLHPTFHLKATIFTLQLLXXXXXXXXXXXXDRLLQLFRYVPREQLTIPDFVFQHDLEVNG 753 +Y+ GVD GRPV+V G F + +DLE+ +LY++K +P+++ Y I YFH+ S P L W+R + VL K+++NL A Y++HPTF K + + L+ + ++QL IP ++ ++D+ NG Sbjct: 384 LYQSGVDRLGRPVIVFCGKWFPAQNIDLEKALLYLIKLLDPIVKGDYVISYFHTLTSTNNYPSLHWLREVYSVLPYKYKKNLKAFYIVHPTFWTKMMTWWFTTFMAPAIKAKVHSLPGVEHLYSAITKDQLEIPAYITEYDMATNG 529
BLAST of CN185198 vs. ExPASy Swiss-Prot
Match: GACY_DICDI (Rho GTPase-activating protein gacY OS=Dictyostelium discoideum GN=gacY PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.347e-20 Identity = 42/143 (29.37%), Postives = 83/143 (58.04%), Query Frame = -3 Query: 334 MKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFEPLIQKPYSIVYFHSAASLQLQPDLGWMRRLQQVLGRKHQRNLHAIYVLHPTFHLKATIFTLQLLXXXXXXXXXXXXDRLLQLFRYVPREQLTIPDFVFQH 762 + +Y G D+ GR ++V++ +H +R +D+ER +LY + +P++++ Y +VY H+ + +P + WM+++ + RK+++NL +Y++HPT +K T+ + D L +LF+ PREQL +P+ + H Sbjct: 373 LNFIYPAGKDNLGRTIIVIIASHLPVREMDMERVLLYTISIMDPVVEEEYVLVYVHTNMNNSNKPSMAWMKKVYTIFNRKYKKNLKGLYIVHPTTWIKFTLGIFKHFLSSKFWKKLTYIDDLGELFKTFPREQLALPNAIMMH 515
BLAST of CN185198 vs. ExPASy Swiss-Prot
Match: GDAP2_XENTR (Ganglioside-induced differentiation-associated protein 2 OS=Xenopus tropicalis PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.003e-20 Identity = 50/149 (33.56%), Postives = 81/149 (54.36%), Query Frame = -3 Query: 316 MKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFEPLIQKPYSIVYFHSAASLQLQPDLGWMRRLQQVLGRKHQRNLHAIYVLHPTFHLKATIFTLQLLXXXXXXXXXXXXDRLLQLFRYVPREQLTIPDFVFQHDLEVNG 762 +K +Y+ GVD+ GR VMVVVG + + +D+E+ +LY + + + K Y +VYFH+ PD +++ + ++ K+++NL A+Y +HPTF K + + + L QLF VP EQ+ IP FV +D NG Sbjct: 336 LKALYQSGVDNCGRTVMVVVGRNIPVLLIDMEKALLYFIHMMDHVAAKEYVLVYFHTLTGEHNHPDSDFLKNMYDIVDVKYKKNLKALYFVHPTFRSKVSSWFFTTFTVSGLKDKVHQVESLHQLFSAVPPEQIEIPPFVLDYDARENG 484
BLAST of CN185198 vs. ExPASy Swiss-Prot
Match: GDAP2_XENLA (Ganglioside-induced differentiation-associated protein 2 OS=Xenopus laevis PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.426e-19 Identity = 48/149 (32.21%), Postives = 80/149 (53.69%), Query Frame = -3 Query: 316 MKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFEPLIQKPYSIVYFHSAASLQLQPDLGWMRRLQQVLGRKHQRNLHAIYVLHPTFHLKATIFTLQLLXXXXXXXXXXXXDRLLQLFRYVPREQLTIPDFVFQHDLEVNG 762 +K +Y+ GVD+ GR VMVVVG + + +D+E+ +LY + + + K Y +VYFH+ D +++ + ++ K+++NL A+Y +HPTF K + + + L QLF +P EQ+ IP FV +D NG Sbjct: 336 LKALYQSGVDNCGRSVMVVVGRNIPVLLIDMEKALLYFIHMMDHVTAKDYVLVYFHTLTGEHNHLDSDFLKNMYDIIDVKYKKNLKALYFVHPTFRSKVSTWFFTTFTVSGLKDKVHQVESLHQLFTAIPPEQIEIPPFVLDYDARENG 484
BLAST of CN185198 vs. ExPASy Swiss-Prot
Match: GDAP2_RAT (Ganglioside-induced differentiation-associated-protein 2 OS=Rattus norvegicus GN=Gdap2 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.550e-19 Identity = 50/149 (33.56%), Postives = 81/149 (54.36%), Query Frame = -3 Query: 316 MKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFEPLIQKPYSIVYFHSAASLQLQPDLGWMRRLQQVLGRKHQRNLHAIYVLHPTFHLKATIFTLQLLXXXXXXXXXXXXDRLLQLFRYVPREQLTIPDFVFQHDLEVNG 762 +K +Y+ GVD+ GR VMVVVG + + +D+++ +LY + + + K Y +VYFH+ S D ++++L V+ K++RNL A+Y +HPTF K + + D L QLF + EQ+ P FV ++D NG Sbjct: 337 LKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIHVMDHIAVKEYVLVYFHTLTSEYNHLDSDFLKKLYDVVDIKYKRNLKAVYFVHPTFRSKVSTWFFTTFSVSGLKDKIHHVDSLQQLFSAISPEQIDFPPFVLEYDARENG 485
BLAST of CN185198 vs. ExPASy Swiss-Prot
Match: GDAP2_NEMVE (Protein GDAP2 homolog OS=Nematostella vectensis GN=gdap2 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.550e-19 Identity = 44/148 (29.73%), Postives = 81/148 (54.73%), Query Frame = -3 Query: 316 KIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFEPLIQKPYSIVYFHSAASLQLQPDLGWMRRLQQVLGRKHQRNLHAIYVLHPTFHLKATIFTLQLLXXXXXXXXXXXXDRLLQLFRYVPREQLTIPDFVFQHDLEVNG 759 KI+Y+ GVD GRPV+V V HF + DL + V Y + + ++ + Y +VYFH+ ++ + QP + +++ L ++ K++RNL A Y++HPT + + + L+ ++ +QL IP +V ++D++ NG Sbjct: 340 KILYQSGVDFLGRPVVVFVARHFTAQNTDLGKAVAYFISVLDRIVNRDYVVVYFHTHSTEENQPPMSFLKELYHIVDNKYRRNLKAFYIVHPTVWARIVTWFFTTFTASSVKEKVHFLSGVQYLYDWINPDQLDIPAYVLEYDMKENG 487
BLAST of CN185198 vs. ExPASy Swiss-Prot
Match: GDAP2_MOUSE (Ganglioside-induced differentiation-associated protein 2 OS=Mus musculus GN=Gdap2 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.860e-19 Identity = 50/149 (33.56%), Postives = 81/149 (54.36%), Query Frame = -3 Query: 316 MKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFEPLIQKPYSIVYFHSAASLQLQPDLGWMRRLQQVLGRKHQRNLHAIYVLHPTFHLKATIFTLQLLXXXXXXXXXXXXDRLLQLFRYVPREQLTIPDFVFQHDLEVNG 762 +K +Y+ GVD+ GR VMVVVG + + +D+++ +LY + + + K Y +VYFH+ S D ++++L V+ K++RNL A+Y +HPTF K + + D L QLF + EQ+ P FV ++D NG Sbjct: 338 LKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIHVMDHIAVKEYVLVYFHTLTSDYNHLDSDFLKKLYDVVDIKYKRNLKAVYFVHPTFRSKVSTWFFTTFSVSGLKDKIHHVDSLQQLFSAISPEQIDFPPFVLEYDARENG 486
BLAST of CN185198 vs. ExPASy Swiss-Prot
Match: GDAP2_MACFA (Ganglioside-induced differentiation-associated protein 2 OS=Macaca fascicularis GN=GDAP2 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.860e-19 Identity = 50/149 (33.56%), Postives = 81/149 (54.36%), Query Frame = -3 Query: 316 MKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFEPLIQKPYSIVYFHSAASLQLQPDLGWMRRLQQVLGRKHQRNLHAIYVLHPTFHLKATIFTLQLLXXXXXXXXXXXXDRLLQLFRYVPREQLTIPDFVFQHDLEVNG 762 +K +Y+ GVD+ GR VMVVVG + + +D+++ +LY + + + K Y +VYFH+ S D ++++L V+ K++RNL A+Y +HPTF K + + D L QLF + EQ+ P FV ++D NG Sbjct: 301 LKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIHVMDHIAVKEYVLVYFHTLTSEYNHLDSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTTFSVSGLKDKIHHVDSLHQLFSAISPEQIDFPPFVLEYDARENG 449
BLAST of CN185198 vs. ExPASy Swiss-Prot
Match: GDAP2_HUMAN (Ganglioside-induced differentiation-associated protein 2 OS=Homo sapiens GN=GDAP2 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.860e-19 Identity = 50/149 (33.56%), Postives = 81/149 (54.36%), Query Frame = -3 Query: 316 MKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFEPLIQKPYSIVYFHSAASLQLQPDLGWMRRLQQVLGRKHQRNLHAIYVLHPTFHLKATIFTLQLLXXXXXXXXXXXXDRLLQLFRYVPREQLTIPDFVFQHDLEVNG 762 +K +Y+ GVD+ GR VMVVVG + + +D+++ +LY + + + K Y +VYFH+ S D ++++L V+ K++RNL A+Y +HPTF K + + D L QLF + EQ+ P FV ++D NG Sbjct: 337 LKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIHVMDHIAVKEYVLVYFHTLTSEYNHLDSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTTFSVSGLKDKIHHVDSLHQLFSAISPEQIDFPPFVLEYDARENG 485 The following BLAST results are available for this feature:
BLAST of CN185198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185198 ID=CN185198; Name=CN185198; organism=Citrus sinensis; type=EST; length=767bpback to top |