CN185123

Overview
NameCN185123
Unique NameCN185123
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN185123 vs. ExPASy Swiss-Prot
Match: Y202_CLOB8 (Uncharacterized protein Cbei_0202 OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=Cbei_0202 PE=4 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 8.994e-16
Identity = 41/92 (44.57%), Postives = 61/92 (66.30%), Query Frame = -3 
Query:  520 CFPLILTDALKHSISMFDEELPGFISDTGLLHGVETRTSCPLQIPRNNETCESTSLKGLYPVGEGAGYAGGIVSAAADGMYAGFAVAKDFGL 795
            C P  + +ALK  I  FD+++ G+  +  +L G+ETRTS P+++ RN  + ES ++ GLYP GEGAG+AGGI+SAA DG+     + + F L
Sbjct:  441 CLPDYVVEALKEGIINFDKKIKGYAREDAILTGIETRTSAPVRLNRN-ASLESINVCGLYPTGEGAGFAGGIISAAVDGIKVAEHIIEKFDL 531
The following BLAST results are available for this feature:
BLAST of CN185123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y202_CLOB88.994e-1644.57Uncharacterized protein Cbei_0202 OS=Clostridium b... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0006M15_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006M15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185123 ID=CN185123; Name=CN185123; organism=Citrus sinensis; type=EST; length=836bp
GAGGAACACATACAAAATTTAATATCGTATTTGCAAAATTCGATCTTTCA
TCTCTTCTGTAGTATTTTTTCTAAACCATAATGAATGTAAGTTTCTCACT
CAAGCGGACACCGGCAAGTTTTTTTCATTACAGATTACAAAATACAAATG
ATTAGCCCTTTTGCAAAAACCAGATTTAAGTCATAAATTTACAAGTTTCT
GATAATCATATAGCTTTTGATTCAAGCATTAACTTATGGTAGATCATCTC
TAAGGCTTCCACATTCTCCTCTTCAAACAACTCTGGATTGTCTTCAGCGG
TAGACATGACGTGAGCAACAGGTCAATCTGTTCATTTGAGGTTTTCTCAA
AGCCCCTGCCGTTTATTCCAAGTCTATGTCTATGTGGACCTTGAGCGGAT
GATCAAAAACTTGTATTCCGAGACTACAATCAAAGAGACCAATAATCGAA
CACTTTTTAGTACTTCGCGAATCCAGCTGCCTGAGCTTTCCCCAAAATTG
ATTCGATGTCAGCAGGGAACAAACCAAAATCTTTTGCCACGGCAAAACCG
GCATACATGCCATCCGCTGCTGCACTTACAATCCCACCAGCATAGCCTGC
TCCTTCGCCTACTGGGTAAAGCCCTTTTAAGGATGTGCTCTCGCAAGTCT
CATTATTGCGGGGAATCTGAAGCGGACAGCTGGTCCTTGTCTCTACTCCA
TGAAGAAGGCCAGTATCTGAGATAAATCCTGGTAACTCTTCATCAAACAT
TGAGATTGAATGCTTCAAAGCATCAGTTAAAATGAGTGGGAAACAGCTCA
TGGAGACTTGCTGCCTTCACTCCTAATCGATAACTA
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