CN185117

Overview
NameCN185117
Unique NameCN185117
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3618 contig Csv1_Contig3618:21..708. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185117 vs. ExPASy Swiss-Prot
Match: QORL2_NEMVE (Quinone oxidoreductase-like protein 2 homolog OS=Nematostella vectensis GN=v1g238856 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.575e-22
Identity = 68/205 (33.17%), Postives = 105/205 (51.22%), Query Frame = 3
Query:   78 RTKMEALVCRKLGDPTVSIHDEKSPILLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL-GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQI-GKVCGATIIAVARGAEKIKFLKSLGVDHVVD 686
            R    A++C +LG P V + D+ S      TE +     ++ VRV V +  +N+A+ L+ +GKYQEKP LPFVPG++ SG V  VG  V++   GD V G     G  A+  V  Q+ L+ +P       AAAL +++GT+++ L H+A L  GQ                 +   V GA +I  +R  EK+  ++ +G    +D
Sbjct:   36 RKSYRAVMCNELGKPLV-VEDKFS------TENL----GTSQVRVAVHSCGINFADILKCIGKYQEKPELPFVPGTEISGEVVEVGSKVTSLSKGDRVLGVCGQGGGMAEECVLPQTALWKIPSSLSFTQAAALAISYGTAYIGLKHKANLQPGQTVLVTAAAGALGLASVDLAANVFGAKVIGASR-KEKLVIVQEIGATATID 228          
BLAST of CN185117 vs. ExPASy Swiss-Prot
Match: QORL2_RAT (Quinone oxidoreductase-like protein 2 OS=Rattus norvegicus PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.873e-21
Identity = 63/182 (34.62%), Postives = 90/182 (49.45%), Query Frame = 3
Query:  144 KSPILLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIG-KVCGATIIAVARGAEKIKFLKSLGVDHVVD 686
            K P+ + +  P P       VRV V    +N+A+ L   G+YQEKPPLPF PG ++SG V   G +VS  K GD V G +   S A+  + DQ  L+ +P+   L  AA LPV++GT+ +A+ HRA++  G+                 +   V  A +IA A   EK K     G    V+
Sbjct:   36 KQPLTIQEVAPRPI--GPQEVRVDVHFCGINFADNLVCRGQYQEKPPLPFTPGMEFSGVVLEAGADVSTVKKGDRVIGVSNFHSMAEQCITDQKTLWRIPENVSLQDAAVLPVSYGTAILAVDHRARIQPGETVLVTAAAGATGLAVIDVATNVFCAKVIAAAGSDEKCKLAMQRGAQSGVN 215          
BLAST of CN185117 vs. ExPASy Swiss-Prot
Match: QORL2_MOUSE (Quinone oxidoreductase-like protein 2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.058e-21
Identity = 61/182 (33.52%), Postives = 90/182 (49.45%), Query Frame = 3
Query:  144 KSPILLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIG-KVCGATIIAVARGAEKIKFLKSLGVDHVVD 686
            K P+ + +  P P       VRV V    +N+A+ L   G+YQEKPPLPF PG ++SG V   G +VS  K GD V G ++  + A+  + DQ  L+ +P+   L  AA LPV++GT+ +A+ HRA++  G+                 +   V  A +IA     EK K     G    V+
Sbjct:   36 KQPLTIQEVAPRPV--GPQEVRVDVHFCGVNFADILACRGQYQEKPPLPFTPGMEFSGAVLETGTDVSTVKKGDRVIGVSSFHAMAEQCITDQKTLWRIPENVSLQDAAVLPVSYGTAILAVDHRARIQPGETVLVTAAAGATGLAVIDVATNVFRAKVIAATGSDEKCKLAVQRGAQFSVN 215          
BLAST of CN185117 vs. ExPASy Swiss-Prot
Match: QORL2_BOVIN (Quinone oxidoreductase-like protein 2 OS=Bos taurus PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.350e-18
Identity = 58/182 (31.87%), Postives = 84/182 (46.15%), Query Frame = 3
Query:  144 KSPILLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIG-KVCGATIIAVARGAEKIKFLKSLGVDHVVD 686
            K P+++ +  P P       VRV V    +N+A+ L   G+YQE+  LPF PG ++SG V   G +VS  K GD V G       A+  + D   L+ +P+   L  AAALPV++GT+  AL HRA    G+                 +   +  A +IA A   EK +     G    V+
Sbjct:   35 KRPLVIEEVTPRPV--QPHEVRVNVHFCGINFADILACQGQYQERHQLPFTPGMEFSGMVLETGTDVSTVKEGDRVIGLPGFSGMAEECITDHKNLWQIPEKVSLREAAALPVSYGTAIFALEHRACTQPGETVLVTAAAGATGLAVIDVATNILQAKVIAAAGSDEKCQLAMQSGAQSSVN 214          
BLAST of CN185117 vs. ExPASy Swiss-Prot
Match: QOR_MOUSE (Quinone oxidoreductase OS=Mus musculus GN=Cryz PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.862e-15
Identity = 52/170 (30.59%), Postives = 79/170 (46.47%), Query Frame = 3
Query:  174 PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-CGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHV 680
            P+PQ   S  V ++V A  +N        G Y  KP LP+ PGSD +G +++VG  VS FK GD V C     G +A+F +A    ++P+P+  +    AAL + + T+  AL H A+  +G+                QI +  G  ++  A   E  K +   G   V
Sbjct:   31 PVPQ---SHQVLIKVHACGVNPVETYIRSGAYSRKPALPYTPGSDVAGIIESVGDKVSAFKKGDRVFCYSTVSGGYAEFALAADDTIYPLPETLNFRQGAALGIPYFTACRALFHSARARAGESVLVHGASGGVGLATCQIARAHGLKVLGTAGSEEGKKLVLQNGAHEV 197          
BLAST of CN185117 vs. ExPASy Swiss-Prot
Match: ERYA2_SACER (Erythronolide synthase, modules 3 and 4 OS=Saccharopolyspora erythraea GN=eryA PE=1 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 1.862e-15
Identity = 60/171 (35.09%), Postives = 85/171 (49.71%), Query Frame = 3
Query:  171 EPIPQLNS---STAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVD 674
            EP P +     +  VRV V+AT +N+ + L  LG Y +K  +    G++ +G V AVGP+V  F  GD V G    G+FA   V D   L  VP G     AAA+P+A+ T+H AL   A L +GQ                 + +  GA ++A A G  K   L++LG+D
Sbjct: 2839 EPAPDVEQPLRAGEVRVDVRATGVNFRDVLLALGMYPQKADM----GTEAAGVVTAVGPDVDAFAPGDRVLGLFQ-GAFAPIAVTDHRLLARVPDGWSDADAAAVPIAYTTAHYALHDLAGLRAGQSVLIHAAAGGVGMAAVALARRAGAEVLATA-GPAKHGTLRALGLD 3003          
BLAST of CN185117 vs. ExPASy Swiss-Prot
Match: QOR_RAT (Quinone oxidoreductase OS=Rattus norvegicus GN=Cryz PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.148e-15
Identity = 52/170 (30.59%), Postives = 80/170 (47.06%), Query Frame = 3
Query:  174 PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL-GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHV 680
            P PQ   S  V ++V A  +N        G Y  KP LP+ PGSD +G +++VG  VS FK GD V  F+ + G +A+F ++  +  +P+P+  D    AAL + + T+  AL H A+  +G+                QI +  G  ++  A   E  K +   G   V
Sbjct:   31 PAPQ---SHQVLIKVHACGVNPVETYIRSGTYSRKPALPYTPGSDVAGIIESVGDGVSAFKKGDRVFCFSTVSGGYAEFALSADNTTYPLPETLDFRQGAALGIPYFTACRALFHSARARAGESVLVHGASGGVGLATCQIARAHGLKVLGTAGSEEGKKLVLQNGAHEV 197          
BLAST of CN185117 vs. ExPASy Swiss-Prot
Match: PHAS_MYCTU (Phthioceranic/hydroxyphthioceranic acid synthase OS=Mycobacterium tuberculosis GN=pks2 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.207e-14
Identity = 50/162 (30.86%), Postives = 82/162 (50.62%), Query Frame = 3
Query:  204 VRVRVKATSLNYANYLQILGKYQE-KPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVD 686
            + V V+A+S+N+A+ L   G+Y   +  LP + G+D++G V AVGP V++ KVGD V G +  G +  F+  D      +P G     AAA+  A  T+   L   A++ +G                  I +  GA I A A   ++ + L+++G++HV D
Sbjct: 1456 IEVAVRASSVNFADVLIAFGRYPSFEGHLPQL-GTDFAGVVTAVGPGVTDHKVGDHVGGMSPNGCWGTFVTCDARLAATLPPGLGDAQAAAVTTAHATAWYGLHELARIRAGDTVLIHSGTGGVGQAAIAIARAAGAEIFATAGTPQRRELLRNMGIEHVYD 1616          
BLAST of CN185117 vs. ExPASy Swiss-Prot
Match: PHAS_MYCTA (Phthioceranic/hydroxyphthioceranic acid synthase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=pks2 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.207e-14
Identity = 50/162 (30.86%), Postives = 82/162 (50.62%), Query Frame = 3
Query:  204 VRVRVKATSLNYANYLQILGKYQE-KPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVD 686
            + V V+A+S+N+A+ L   G+Y   +  LP + G+D++G V AVGP V++ KVGD V G +  G +  F+  D      +P G     AAA+  A  T+   L   A++ +G                  I +  GA I A A   ++ + L+++G++HV D
Sbjct: 1456 IEVAVRASSVNFADVLIAFGRYPSFEGHLPQL-GTDFAGVVTAVGPGVTDHKVGDHVGGMSPNGCWGTFVTCDARLAATLPPGLGDAQAAAVTTAHATAWYGLHELARIRAGDTVLIHSGTGGVGQAAIAIARAAGAEIFATAGTPQRRELLRNMGIEHVYD 1616          
BLAST of CN185117 vs. ExPASy Swiss-Prot
Match: PHAS_MYCBP (Phthioceranic/hydroxyphthioceranic acid synthase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=pks2 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.207e-14
Identity = 50/162 (30.86%), Postives = 82/162 (50.62%), Query Frame = 3
Query:  204 VRVRVKATSLNYANYLQILGKYQE-KPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVD 686
            + V V+A+S+N+A+ L   G+Y   +  LP + G+D++G V AVGP V++ KVGD V G +  G +  F+  D      +P G     AAA+  A  T+   L   A++ +G                  I +  GA I A A   ++ + L+++G++HV D
Sbjct: 1456 IEVAVRASSVNFADVLIAFGRYPSFEGHLPQL-GTDFAGVVTAVGPGVTDHKVGDHVGGMSPNGCWGTFVTCDARLAATLPPGLGDAQAAAVTTAHATAWYGLHELARIRAGDTVLIHSGTGGVGQAAIAIARAAGAEIFATAGTPQRRELLRNMGIEHVYD 1616          
The following BLAST results are available for this feature:
BLAST of CN185117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
QORL2_NEMVE4.575e-2233.17Quinone oxidoreductase-like protein 2 homolog OS=N... [more]
QORL2_RAT3.873e-2134.62Quinone oxidoreductase-like protein 2 OS=Rattus no... [more]
QORL2_MOUSE5.058e-2133.52Quinone oxidoreductase-like protein 2 OS=Mus muscu... [more]
QORL2_BOVIN2.350e-1831.87Quinone oxidoreductase-like protein 2 OS=Bos tauru... [more]
QOR_MOUSE1.862e-1530.59Quinone oxidoreductase OS=Mus musculus GN=Cryz PE=... [more]
ERYA2_SACER1.862e-1535.09Erythronolide synthase, modules 3 and 4 OS=Sacchar... [more]
QOR_RAT4.148e-1530.59Quinone oxidoreductase OS=Rattus norvegicus GN=Cry... [more]
PHAS_MYCTU1.207e-1430.86Phthioceranic/hydroxyphthioceranic acid synthase O... [more]
PHAS_MYCTA1.207e-1430.86Phthioceranic/hydroxyphthioceranic acid synthase O... [more]
PHAS_MYCBP1.207e-1430.86Phthioceranic/hydroxyphthioceranic acid synthase O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006M10_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006M10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185117 ID=CN185117; Name=CN185117; organism=Citrus sinensis; type=EST; length=688bp
GAGGAACCAATGTGAGCTTTTTTGATGATAACGCCTTACATTTTCATAAT
AAATTGGAAACTTTGAAGTGCTTGACTCGAACGAAGATGGAGGCACTGGT
GTGCAGGAAACTGGGCGATCCAACGGTCTCAATTCACGATGAAAAATCGC
CGATTCTGTTGAGTAAAACTGAGCCAATTCCACAATTGAATTCTTCAACT
GCAGTTAGAGTCAGAGTGAAAGCCACCAGCTTGAACTACGCTAATTACTT
GCAGATATTGGGGAAATATCAAGAGAAACCACCATTGCCCTTCGTCCCCG
GCTCCGATTATTCGGGCACTGTTGATGCGGTGGGCCCCAATGTCTCAAAT
TTCAAAGTGGGTGACACTGTTTGTGGATTTGCTGCCCTTGGCTCCTTTGC
CCAATTCATCGTCGCTGATCAGTCAGAATTGTTTCCAGTGCCAAAGGGAT
GTGATTTGTTGGCTGCTGCTGCACTTCCTGTTGCATTTGGAACCTCACAT
GTTGCTCTTGTTCATCGGGCCCAATTGTCCTCCGGTCAGGTCTTGCTTGT
TCTTGGTGCTGCTGGAGGTGTTGGTGTTGCCGCTGTTCAAATTGGCAAGG
TTTGCGGAGCCACTATCATTGCCGTTGCTAGGGGTGCTGAAAAGATAAAA
TTTTTGAAGTCATTGGGCGTCGATCATGTAGTTGACTT
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