CN185067

Overview
NameCN185067
Unique NameCN185067
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1518 contig Csv1_Contig1518:36..733. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185067 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.274e-59
Identity = 124/233 (53.22%), Postives = 160/233 (68.67%), Query Frame = 1
Query:   13 EEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLRLLVSYNALHCSFVD-----GQRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKKQILEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVXXXXXXXXNMIISKYPHIKGINYDLPYVIKDAPSY 696
            +EE + F  AM LASA VLP +++  +ELD+ EI++KAGPGA LS +EI + +P K  NP+A    LDR+LRLL SY+ L CS  D      +RLY LAPV K F+  N DGVS+ P   +  DK+ ++ W+ LK  ILEGGI FNKA+GM  ++Y G D RFN VFN GM  H++I M+K+LE+YKGFE +  LVDV        N I+SKYP IKGIN+DLP+VI+DAPSY
Sbjct:   16 DEEAHLF--AMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTK--NPDAPVM-LDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCK-FLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSY 242          
BLAST of CN185067 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.839e-59
Identity = 123/233 (52.79%), Postives = 160/233 (68.67%), Query Frame = 1
Query:   13 EEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLRLLVSYNALHCSFVD-----GQRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKKQILEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVXXXXXXXXNMIISKYPHIKGINYDLPYVIKDAPSY 696
            +EE + F  AM LASA VLP +++  +ELD+ EI++KAGPGA LS +EI + +P K  NP+A    LDR+LRLL SY+ L CS  D      +RLY LAPV K F+  N DGVS+ P   +  DK+ ++ W+ LK  IL+GGI FNKA+GM  ++Y G D RFN VFN GM  H++I M+K+LE+YKGFE +  LVDV        N I+SKYP IKGIN+DLP+VI+DAPSY
Sbjct:   16 DEEAHLF--AMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTK--NPDAPVM-LDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCK-FLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSY 242          
BLAST of CN185067 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.839e-59
Identity = 119/233 (51.07%), Postives = 164/233 (70.39%), Query Frame = 1
Query:   13 EEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLRLLVSYNALHCSFVDG-----QRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKKQILEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVXXXXXXXXNMIISKYPHIKGINYDLPYVIKDAPSY 696
            +EE      AM LASA VLP V+++ +ELD+ E+I K+GPGA +S +E+ AQ+P +  NP+A    LDR+LRLL SY+ L+C+  D      +RLYSLAPV K F+  N DGVS+   + +  DK+ ++ W+ LK  +LEGGI FNKA+GM  ++Y G D RFN VFN GM +H++I+M+K+LE Y+GF+ +K +VDV        NMI+SKYP IKGIN+DLP+VI+DAPSY
Sbjct:   14 KEEEEACLSAMRLASASVLPMVLKSAIELDLLELIKKSGPGAYVSPSELAAQLPTQ--NPDAPVM-LDRILRLLASYSVLNCTLKDLPDGGIERLYSLAPVCK-FLTKNEDGVSMAALLLMNQDKVLMESWYHLKDAVLEGGIPFNKAYGMTAFEYHGKDPRFNKVFNQGMSNHSTIIMKKILEIYQGFQGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIEDAPSY 242          
BLAST of CN185067 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 8.260e-59
Identity = 121/233 (51.93%), Postives = 165/233 (70.82%), Query Frame = 1
Query:   13 EEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLRLLVSYNALHC---SFVDG--QRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKKQILEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVXXXXXXXXNMIISKYPHIKGINYDLPYVIKDAPSY 696
            EEE   F  AM LASA VLP V+++ +ELD+ E+I+KAGPGA +S +E+ AQ+P   +NPEA    LDR+LRLL +Y+ L C   +  DG  +RLY LAPV K F+  N DGVS+ P + +  DK+ ++ W+ LK  +L+GGI FNKA+GM  ++Y G D RFN VFN GM +H++I M+K+LE Y+GFE +K +VDV        NMIISKYP IKGIN++LP+V++DAPS+
Sbjct:    3 EEEACLF--AMSLASASVLPMVLKSAIELDLLELIAKAGPGAYVSPSELAAQLPT--HNPEAPIM-LDRILRLLATYSVLDCKLNNLADGGVERLYGLAPVCK-FLTKNADGVSMAPLLLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILEVYRGFEGLKTVVDVGGGTGATLNMIISKYPTIKGINFELPHVVEDAPSH 229          
BLAST of CN185067 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 8.260e-59
Identity = 120/233 (51.50%), Postives = 161/233 (69.10%), Query Frame = 1
Query:   13 EEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLRLLVSYNALHCSF---VDG--QRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKKQILEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVXXXXXXXXNMIISKYPHIKGINYDLPYVIKDAPSY 696
            + E   F  AM LASA VLP V++A VELD+ EI++K+GPGA +S +E+ AQ+P K  NPEA    LDR+ RLL +Y+ L+C+     DG  +RLYSLAPV K F+  N DGVS+ P + +  DK+ ++ W+ L   +L+GG+ FNKA+GM  ++Y G D RFN VFN GM  HT++ M+K+LE Y GFE +  +VDV        NMI+SKYP IKGIN+DLP+VI+DAPSY
Sbjct:   10 QTEDEAFVFAMQLASASVLPMVLKATVELDLLEIMAKSGPGAFISPSELAAQLPTK--NPEAPVM-LDRMFRLLATYSVLNCTLRTLPDGRVERLYSLAPVCK-FLTKNGDGVSIAPILLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTTFEYHGTDPRFNKVFNCGMSDHTTLSMKKILEDYTGFEGLNSIVDVGGGTGATVNMIVSKYPSIKGINFDLPHVIRDAPSY 238          
BLAST of CN185067 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 4.100e-58
Identity = 122/232 (52.59%), Postives = 158/232 (68.10%), Query Frame = 1
Query:   16 EETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLRLLVSYNALHC---SFVDG--QRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKKQILEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVXXXXXXXXNMIISKYPHIKGINYDLPYVIKDAPSY 696
            +E  NF  AM LASA VLP V+++ +ELD+ E+I KAG GA +S AE+ AQ  L   N EA    LDR+LRLL SY  L C   +  DG  QRLY LAPV K F+  N DGVS+ P   +  DK+ ++ W+ LK  +L+GGI FNKA+GM  ++Y G D RFN VFN GM +H++I M+K+LE+Y GF+ +K +VDV        NMIISKYP IKGIN+DLP+V++DAPSY
Sbjct:   13 DEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKAGAGAFVSPAELAAQ--LLTTNAEAHVM-LDRILRLLTSYAILECRLKTLPDGGVQRLYGLAPVCK-FLTKNEDGVSMAPLALMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIISKYPSIKGINFDLPHVVEDAPSY 240          
BLAST of CN185067 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 4.100e-58
Identity = 123/233 (52.79%), Postives = 159/233 (68.24%), Query Frame = 1
Query:   13 EEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLRLLVSYNALHCSF---VDG--QRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKKQILEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVXXXXXXXXNMIISKYPHIKGINYDLPYVIKDAPSY 696
            +EE N F  AM LASA VLP V++A +ELD+ EI++KAGPG  LS  +I +Q+P K  NP+A    LDR+LRLL SY+ L  S     DG  +RLY L PV K F+  N +GVS+ P   +  DK+ L+ W+ LK  +LEGGI FNKA+GM  ++Y G D RFN VFN GM  H++I M+K+LE+YKGFE +  +VDV        NMI+SKYP IKGIN+DLP+VI+DAP Y
Sbjct:   16 DEEANLF--AMQLASASVLPMVLKAAIELDLLEIMAKAGPGVFLSPTDIASQLPTK--NPDAPVM-LDRMLRLLASYSILTYSLRTLADGKVERLYGLGPVCK-FLTKNEEGVSIAPLCLMNQDKVLLESWYHLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMADHSTITMKKILETYKGFEGLTSVVDVGGGTGAVLNMIVSKYPSIKGINFDLPHVIEDAPQY 242          
BLAST of CN185067 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 223.402 bits (568), Expect = 9.133e-58
Identity = 117/233 (50.21%), Postives = 161/233 (69.10%), Query Frame = 1
Query:   13 EEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLRLLVSYNALHCSF---VDG--QRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKKQILEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVXXXXXXXXNMIISKYPHIKGINYDLPYVIKDAPSY 696
            + E   F  AM LASA VLP V+++ +ELD+ EI++KAGPGA +S +E+ AQ+P K  NPEA    LDR+LRLL +Y+ L+C+     DG  +RLYSLAPV K  +  N DGVS+ P + +  DK+ ++ W+ L   +L+GG+ FNKA+GM  ++Y G D RFN VFN GM  H+++ M+K+LE YKGFE +  +VDV        NMI+SKYP IKGIN+DL +VI+DAP+Y
Sbjct:   10 QTEDEAFLFAMQLASASVLPMVLKSALELDLLEIMAKAGPGAAISPSELAAQLPTK--NPEAPVM-LDRMLRLLATYSVLNCTLRTLPDGRVERLYSLAPVCK-LLTKNADGVSVAPLLLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTMTMKKILEDYKGFEGLNSIVDVGGGTGATVNMIVSKYPSIKGINFDLSHVIEDAPAY 238          
BLAST of CN185067 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.193e-57
Identity = 123/233 (52.79%), Postives = 159/233 (68.24%), Query Frame = 1
Query:   13 EEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLRLLVSYNALHCSF---VDG--QRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKKQILEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVXXXXXXXXNMIISKYPHIKGINYDLPYVIKDAPSY 696
            +EE N F  AM LASA VLP V++A +ELD+ EI++KAGPGA LS  ++ +Q+P K  NPEA    LDR+LRLL SY+ L  S     DG  +RLY L PV K F+  N DGVS+     +  DK+ ++ W+ LK  +L+GGI FNKA+GM  +DY G D RFN VFN GM  H++I M+K+LE+YKGFE +  +VDV        NMI+SKYP IKGIN+DLP+VI+DAP Y
Sbjct:   16 DEEANLF--AMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPNDLASQLPTK--NPEAPVM-LDRMLRLLASYSILTYSLRTLPDGKVERLYGLGPVCK-FLTKNEDGVSIAALCLMNQDKVLVESWYHLKDAVLDGGIPFNKAYGMTAFDYHGTDPRFNKVFNKGMADHSTITMKKILETYKGFEGLTSIVDVGGGTGAVVNMIVSKYPSIKGINFDLPHVIEDAPQY 242          
BLAST of CN185067 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.193e-57
Identity = 115/224 (51.34%), Postives = 156/224 (69.64%), Query Frame = 1
Query:   40 AMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLRLLVSYNALHCSFVD-----GQRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKKQILEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVXXXXXXXXNMIISKYPHIKGINYDLPYVIKDAPSY 696
            AM LA+A VLPAV+ A +ELD+ EI+++AGPGA L+  E+ +Q+P +  NP+A    LDR+ RLL SY+ L C+  D      +RLY LAP+ K  V+N  DGVSL P   +  D++ L+ W+ +K  ILEGGI F+KAHGM  +DY G D RFN +FN  M  H++I+M+K+LE+Y GFE +K +VDV        NMI++KYP IKGIN+DLP+VI+DAPSY
Sbjct:    5 AMQLATASVLPAVLTAAIELDLLEIMARAGPGAYLTPGEVASQLPTQ--NPDAPVM-LDRIFRLLASYSVLTCTLCDLPEGKVERLYGLAPLCKFLVKNE-DGVSLAPLRLIDQDRVFLESWYYMKDAILEGGIPFHKAHGMTAFDYPGTDPRFNKIFNRAMSDHSTIMMKKILETYNGFEGLKTVVDVGGGTGAILNMIVAKYPSIKGINFDLPHVIEDAPSY 224          
The following BLAST results are available for this feature:
BLAST of CN185067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
COMT1_POPKI1.274e-5953.22Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_POPTM2.839e-5952.79Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_CATRO2.839e-5951.07Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_COFCA8.260e-5951.93Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_CAPCH8.260e-5951.50Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
COMT2_OCIBA4.100e-5852.59Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT1_PRUDU4.100e-5852.79Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_CAPAN9.133e-5850.21Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_ROSCH1.193e-5752.79Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_EUCGL1.193e-5751.34Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006K22_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006K22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185067 ID=CN185067; Name=CN185067; organism=Citrus sinensis; type=EST; length=698bp
GAGGCTGATCAGGAAGAAGAGACAAATAATTTCTCACATGCAATGGGACT
TGCAAGTGCAATAGTGCTACCTGCAGTTATGCAAGCAGTGGTAGAGCTTG
ATGTGTTTGAGATCATAAGCAAAGCCGGTCCTGGTGCTAAGCTTTCGGTT
GCGGAGATTGTGGCTCAAATTCCCTTAAAAGATAATAATCCTGAAGCTGC
AGCCACGACGTTGGATCGGGTGCTGAGGCTGCTTGTCAGCTACAACGCTC
TTCATTGCTCTTTTGTCGATGGACAAAGGCTCTACTCTCTTGCTCCTGTT
TCTAAACACTTTGTTCGCAACAATCGAGACGGCGTGTCGTTGCGTCCCTA
CATGGCCTTGTGTCTCGACAAGATCTGCTTGGATGGCTGGTTTGGATTGA
AAAAGCAGATTCTTGAAGGAGGAATTGCGTTTAATAAAGCGCACGGAATG
CAAATCTATGATTACCTAGGCGTCGACTCAAGGTTCAATGATGTTTTCAA
TAATGGAATGTTAAGCCACACTTCTATTGTCATGGAGAAGGTCCTAGAAT
CATACAAAGGCTTTGAGCATGTTAAGAAGCTTGTTGATGTTGGCGGCGGC
TTAGGAACTACCCTGAACATGATAATTTCCAAATACCCTCATATTAAGGG
TATTAATTATGATCTGCCTTATGTCATTAAAGATGCCCCATCTTATCC
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