CN185051

Overview
NameCN185051
Unique NameCN185051
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length807
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3559 contig Csv1_Contig3559:550..1356. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185051 vs. ExPASy Swiss-Prot
Match: UPTG1_SOLTU (Alpha-1,4-glucan-protein synthase [UDP-forming] 1 OS=Solanum tuberosum GN=UPTG1 PE=1 SV=2)

HSP 1 Score: 492.271 bits (1266), Expect = 1.353e-138
Identity = 227/249 (91.16%), Postives = 235/249 (94.38%), Query Frame = 1
Query:   61 MPRGIPLLKDELDIVIPTIRNLDFLEMWRPFFEPYHLIIVQDGDPSKTINVPDGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVGKDPSGKPINALEQHIKNILSPSTPLFFNTLYDPFREGADFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPRERNTRYVDMVLTIPKGTLFPMCGMNLAFDRHLIGPAMYFGLMGDGQPIGRYDDMWAGWCTKVICDH 807
            M    PLLKDELDIVIPTIRNLDFLEMWRPFF+PYHLIIVQDGDPSK I VP+GFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYI+TIDDDCFV KDPSGK INALEQHIKN+L PSTP FFNTLYDP+R+GADFVRGYPFS+REG PTAVSHGLWLNIPDYDAPTQLVKP ERNTRYVD V+TIPKGTLFPMCGMNLAFDR LIGPAMYFGLMGDGQPIGRYDDMWAGWCTKVICDH
Sbjct:    1 MAAATPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKIIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLCPSTPHFFNTLYDPYRDGADFVRGYPFSMREGAPTAVSHGLWLNIPDYDAPTQLVKPHERNTRYVDAVMTIPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCTKVICDH 249          
BLAST of CN185051 vs. ExPASy Swiss-Prot
Match: UPTG2_SOLTU (Alpha-1,4-glucan-protein synthase [UDP-forming] 2 OS=Solanum tuberosum GN=UPTG2 PE=1 SV=1)

HSP 1 Score: 491.886 bits (1265), Expect = 1.767e-138
Identity = 227/244 (93.03%), Postives = 234/244 (95.90%), Query Frame = 1
Query:   76 PLLKDELDIVIPTIRNLDFLEMWRPFFEPYHLIIVQDGDPSKTINVPDGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVGKDPSGKPINALEQHIKNILSPSTPLFFNTLYDPFREGADFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPRERNTRYVDMVLTIPKGTLFPMCGMNLAFDRHLIGPAMYFGLMGDGQPIGRYDDMWAGWCTKVICDH 807
            PLLKDELDIVIPTIRNLDFLEMWRPFF+PYHLIIVQDGDPSK INVP+GFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYI+TIDDDCFV KDPSGK INALEQHIKN+L PSTP FFNTLYDP+REGADFVRGYPFS+REG  TAVSHGLWLNIPDYDAPTQLVKPRERNTRYVD V+TIPKGTLFPMCGMNLAFDR LIGPAMYFGLMGDGQPIGRYDDMWAGWC KVICDH
Sbjct:   10 PLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKIINVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLCPSTPHFFNTLYDPYREGADFVRGYPFSMREGAATAVSHGLWLNIPDYDAPTQLVKPRERNTRYVDAVMTIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCIKVICDH 253          
BLAST of CN185051 vs. ExPASy Swiss-Prot
Match: UPTG_PEA (Alpha-1,4-glucan-protein synthase [UDP-forming] OS=Pisum sativum GN=UPTG PE=1 SV=1)

HSP 1 Score: 490.345 bits (1261), Expect = 5.140e-138
Identity = 226/251 (90.04%), Postives = 237/251 (94.42%), Query Frame = 1
Query:   55 AAMPRGIPLLKDELDIVIPTIRNLDFLEMWRPFFEPYHLIIVQDGDPSKTINVPDGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVGKDPSGKPINALEQHIKNILSPSTPLFFNTLYDPFREGADFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPRERNTRYVDMVLTIPKGTLFPMCGMNLAFDRHLIGPAMYFGLMGDGQPIGRYDDMWAGWCTKVICDH 807
            A++P+  PLLKDELDIVIPTIRNLDFLEMWRPFFE YHLIIVQDGDPSK I VP+GFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYI+TIDDDCFV KDP+G  INALEQHIKN+LSPSTP FFNTLYDP+REG DFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKP ERNTR+VD VLTIPKG+LFPMCGMNLAF+R LIGPAMYFGLMGDGQPIGRYDDMWAGWC KVICDH
Sbjct:    2 ASLPKPTPLLKDELDIVIPTIRNLDFLEMWRPFFEQYHLIIVQDGDPSKVIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPTGHEINALEQHIKNLLSPSTPFFFNTLYDPYREGTDFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPHERNTRFVDAVLTIPKGSLFPMCGMNLAFNRELIGPAMYFGLMGDGQPIGRYDDMWAGWCIKVICDH 252          
BLAST of CN185051 vs. ExPASy Swiss-Prot
Match: UPTG_MAIZE (Alpha-1,4-glucan-protein synthase [UDP-forming] OS=Zea mays GN=UPTG PE=1 SV=2)

HSP 1 Score: 487.649 bits (1254), Expect = 3.332e-137
Identity = 225/244 (92.21%), Postives = 233/244 (95.49%), Query Frame = 1
Query:   76 PLLKDELDIVIPTIRNLDFLEMWRPFFEPYHLIIVQDGDPSKTINVPDGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVGKDPSGKPINALEQHIKNILSPSTPLFFNTLYDPFREGADFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPRERNTRYVDMVLTIPKGTLFPMCGMNLAFDRHLIGPAMYFGLMGDGQPIGRYDDMWAGWCTKVICDH 807
            PLLKDELDIVIPTIRNLDFLEMWR FF+PYHLIIVQDGDP+KTI VP+GFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYI+TIDDDCFV KDPSGK INALEQHIKN+LSPSTP FFNTLYDP+REGADFVRGYPFSLREG  TAVSHGLWLNIPDYDAPTQLVKP+ERN RYVD V+TIPKGTLFPMCGMNLAFDR LIGPAMYFGLMGDGQPIGRYDDMWAGWC KVICDH
Sbjct:   16 PLLKDELDIVIPTIRNLDFLEMWRAFFQPYHLIIVQDGDPTKTIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGAHTAVSHGLWLNIPDYDAPTQLVKPKERNERYVDAVMTIPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVICDH 259          
The following BLAST results are available for this feature:
BLAST of CN185051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
UPTG1_SOLTU1.353e-13891.16Alpha-1,4-glucan-protein synthase [UDP-forming] 1 ... [more]
UPTG2_SOLTU1.767e-13893.03Alpha-1,4-glucan-protein synthase [UDP-forming] 2 ... [more]
UPTG_PEA5.140e-13890.04Alpha-1,4-glucan-protein synthase [UDP-forming] OS... [more]
UPTG_MAIZE3.332e-13792.21Alpha-1,4-glucan-protein synthase [UDP-forming] OS... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0006K09_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006K09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185051 ID=CN185051; Name=CN185051; organism=Citrus sinensis; type=EST; length=807bp
GAGGCAGCAATGGATTACAAAAAAGTAACAGAGAATGCAACTCCGGAAGA
AACAGCAGCAATGCCAAGGGGAATCCCTTTGTTGAAAGATGAGCTTGATA
TTGTGATACCCACCATCAGGAATCTTGATTTCTTGGAGATGTGGAGGCCC
TTTTTTGAGCCTTATCATTTGATCATTGTTCAAGATGGTGATCCTTCTAA
GACCATCAATGTTCCTGATGGTTTTGACTATGAGTTGTACAATCGTAATG
ATATTAACAGGATTTTGGGTCCCAAGGCCTCTTGCATTTCCTTCAAGGAT
TCTGCTTGTAGGTGTTTTGGCTACATGGTCTCCAAAAAGAAGTATATTTT
CACCATTGATGATGATTGCTTTGTTGGTAAGGATCCATCTGGAAAACCAA
TCAATGCGCTCGAGCAGCACATCAAGAACATTCTCTCCCCTTCAACTCCC
CTTTTCTTCAACACTCTGTATGATCCCTTCAGAGAGGGTGCAGATTTTGT
CCGTGGATACCCTTTCAGTCTCCGCGAGGGTGTCCCAACTGCTGTTTCTC
ATGGCCTCTGGCTCAACATTCCGGACTATGATGCACCTACACAGCTTGTG
AAGCCACGGGAGAGGAACACTAGGTATGTGGATATGGTTTTGACCATTCC
TAAGGGCACTCTCTTCCCCATGTGTGGTATGAATTTGGCATTTGACCGTC
ACTTGATTGGCCCTGCAATGTATTTTGGCCTCATGGGCGACGGTCAGCCA
ATTGGACGTTATGATGATATGTGGGCTGGCTGGTGCACCAAGGTGATATG
TGACCAT
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