CN185045

Overview
NameCN185045
Unique NameCN185045
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig795 contig Csv1_Contig795:5..791. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB2_PEA (Tubulin beta-2 chain (Fragment) OS=Pisum sativum GN=TUBB2 PE=2 SV=1)

HSP 1 Score: 452.981 bits (1164), Expect = 8.681e-127
Identity = 216/237 (91.14%), Postives = 221/237 (93.25%), Query Frame = 2
Query:   77 EILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVTCC 787
            EI+HIQGGQCGNQIG+KFWEVVCAEHGIDPTG+Y GDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH              ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTL L+TPSFGDLNHLISATMSGVTCC
Sbjct:    1 EIVHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYGGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCC 237          
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB2_ARATH (Tubulin beta-2/beta-3 chain OS=Arabidopsis thaliana GN=TUBB2 PE=1 SV=1)

HSP 1 Score: 452.981 bits (1164), Expect = 8.681e-127
Identity = 216/239 (90.38%), Postives = 222/239 (92.89%), Query Frame = 2
Query:   71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVTCC 787
            MREILHIQGGQCGNQIG+KFWEVVCAEHGIDPTG+Y GD+DLQLERINVYYNEASCGR+VPRAVLMDLEPGTMDS+RSGPYGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH              ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTL L+TPSFGDLNHLISATMSGVTCC
Sbjct:    1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCC 239          
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB8_ARATH (Tubulin beta-8 chain OS=Arabidopsis thaliana GN=TUBB8 PE=2 SV=2)

HSP 1 Score: 452.21 bits (1162), Expect = 1.481e-126
Identity = 215/239 (89.96%), Postives = 222/239 (92.89%), Query Frame = 2
Query:   71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVTCC 787
            MREILHIQGGQCGNQIG+KFWEVVCAEHGID TG+YQG+ DLQLER+NVYYNEASCGR+VPRAVLMDLEPGTMDSVRSGPYGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH              ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTL L+TPSFGDLNHLISATMSGVTCC
Sbjct:    1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCC 239          
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB6_ARATH (Tubulin beta-6 chain OS=Arabidopsis thaliana GN=TUBB6 PE=2 SV=1)

HSP 1 Score: 450.284 bits (1157), Expect = 5.627e-126
Identity = 213/239 (89.12%), Postives = 222/239 (92.89%), Query Frame = 2
Query:   71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVTCC 787
            MREILHIQGGQCGNQIGSKFWEVVC EHGIDPTG+Y G++DLQLER+NVYYNEASCGRYVPRA+LMDLEPGTMDSVR+GPYGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVVRKEAENCDCLQGFQVCH              ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTL L+TPSFGDLNHLISATMSGVTCC
Sbjct:    1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCC 239          
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB6_ORYSJ (Tubulin beta-6 chain OS=Oryza sativa subsp. japonica GN=TUBB6 PE=2 SV=1)

HSP 1 Score: 449.899 bits (1156), Expect = 7.349e-126
Identity = 214/239 (89.54%), Postives = 221/239 (92.47%), Query Frame = 2
Query:   71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVTCC 787
            MREILHIQGGQCGNQIGSKFWEVVC EHGIDPTG+Y G +DLQLER+NVYYNEASCGR+VPRAVLMDLEPGTMDSVR+GPYGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH              ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTL L+TPSFGDLNHLISATMSGVTCC
Sbjct:    1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCC 239          
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB6_MAIZE (Tubulin beta-6 chain OS=Zea mays GN=TUBB6 PE=2 SV=1)

HSP 1 Score: 449.514 bits (1155), Expect = 9.598e-126
Identity = 213/239 (89.12%), Postives = 222/239 (92.89%), Query Frame = 2
Query:   71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVTCC 787
            MREILHIQGGQCGNQIG+KFWEVVC EHGIDPTG+Y G++DLQLER+NVYYNEASCGR+VPRAVLMDLEPGTMDSVR+GPYGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH              ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTL L+TPSFGDLNHLISATMSGVTCC
Sbjct:    1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCC 239          
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB5_WHEAT (Tubulin beta-5 chain OS=Triticum aestivum GN=TUBB5 PE=2 SV=1)

HSP 1 Score: 449.514 bits (1155), Expect = 9.598e-126
Identity = 214/239 (89.54%), Postives = 221/239 (92.47%), Query Frame = 2
Query:   71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVTCC 787
            MREILHIQGGQCGNQIGSKFWEVVC EHGIDPTG+Y G +DLQLER+NVYYNEASCGR+VPRAVLMDLEPGTMDSVR+GPYGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH              ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTL L+TPSFGDLNHLISATMSGVTCC
Sbjct:    1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCC 239          
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB5_MAIZE (Tubulin beta-5 chain OS=Zea mays GN=TUBB5 PE=2 SV=1)

HSP 1 Score: 449.514 bits (1155), Expect = 9.598e-126
Identity = 214/239 (89.54%), Postives = 221/239 (92.47%), Query Frame = 2
Query:   71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVTCC 787
            MREILHIQGGQCGNQIGSKFWEVVC EHGIDPTG+Y G +DLQLER+NVYYNEASCGR+VPRAVLMDLEPGTMDSVR+GPYGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH              ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTL L+TPSFGDLNHLISATMSGVTCC
Sbjct:    1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCC 239          
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB4_ORYSJ (Tubulin beta-4 chain OS=Oryza sativa subsp. japonica GN=TUBB4 PE=2 SV=1)

HSP 1 Score: 449.514 bits (1155), Expect = 9.598e-126
Identity = 213/239 (89.12%), Postives = 222/239 (92.89%), Query Frame = 2
Query:   71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVTCC 787
            MREILHIQGGQCGNQIG+KFWEVVC EHGIDPTG+Y G++DLQLER+NVYYNEASCGR+VPRAVLMDLEPGTMDSVR+GPYGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH              ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTL L+TPSFGDLNHLISATMSGVTCC
Sbjct:    1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCC 239          
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB4_ELEIN (Tubulin beta-4 chain OS=Eleusine indica GN=TUBB4 PE=2 SV=1)

HSP 1 Score: 449.514 bits (1155), Expect = 9.598e-126
Identity = 214/239 (89.54%), Postives = 221/239 (92.47%), Query Frame = 2
Query:   71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVTCC 787
            MREILHIQGGQCGNQIGSKFWEVVC EHGIDPTG+Y G +DLQLER+NVYYNEASCGR+VPRAVLMDLEPGTMDSVR+GPYGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH              ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTL L+TPSFGDLNHLISATMSGVTCC
Sbjct:    1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCC 239          
The following BLAST results are available for this feature:
BLAST of CN185045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 423
Match NameE-valueIdentityDescription
TBB2_PEA8.681e-12791.14Tubulin beta-2 chain (Fragment) OS=Pisum sativum G... [more]
TBB2_ARATH8.681e-12790.38Tubulin beta-2/beta-3 chain OS=Arabidopsis thalian... [more]
TBB8_ARATH1.481e-12689.96Tubulin beta-8 chain OS=Arabidopsis thaliana GN=TU... [more]
TBB6_ARATH5.627e-12689.12Tubulin beta-6 chain OS=Arabidopsis thaliana GN=TU... [more]
TBB6_ORYSJ7.349e-12689.54Tubulin beta-6 chain OS=Oryza sativa subsp. japoni... [more]
TBB6_MAIZE9.598e-12689.12Tubulin beta-6 chain OS=Zea mays GN=TUBB6 PE=2 SV=... [more]
TBB5_WHEAT9.598e-12689.54Tubulin beta-5 chain OS=Triticum aestivum GN=TUBB5... [more]
TBB5_MAIZE9.598e-12689.54Tubulin beta-5 chain OS=Zea mays GN=TUBB5 PE=2 SV=... [more]
TBB4_ORYSJ9.598e-12689.12Tubulin beta-4 chain OS=Oryza sativa subsp. japoni... [more]
TBB4_ELEIN9.598e-12689.54Tubulin beta-4 chain OS=Eleusine indica GN=TUBB4 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006K04_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006K04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185045 ID=CN185045; Name=CN185045; organism=Citrus sinensis; type=EST; length=787bp
GAGGAAAGGAAGAATCCCCTGAAAATATCCTCTGCAAATCTCGCTAATCA
AGAAACCCCAAAAGAAGAAAATGCGTGAAATCCTTCACATTCAAGGGGGC
CAATGCGGGAACCAAATCGGATCCAAGTTCTGGGAAGTGGTTTGCGCCGA
GCACGGCATAGACCCGACCGGAAAGTATCAAGGGGATACCGATTTGCAGC
TTGAGAGGATTAATGTGTATTACAACGAGGCAAGTTGCGGGAGATACGTG
CCTAGGGCCGTGCTCATGGATCTTGAACCTGGGACCATGGATAGCGTCAG
GTCTGGTCCGTACGGTCAGGTTTTTAGGCCCGACAATTTTGTCTTTGGCC
AGTCCGGCGCCGGAAACAACTGGGCGAAGGGGCATTATACTGAAGGAGCT
GAGCTGATTGATTCTGTGCTTGATGTTGTTCGTAAAGAAGCCGAGAACTG
CGATTGCTTGCAGGGATTTCAGGTGTGCCATTCTCTGGGAGGAGGGACGG
GTTCCGGGATGGGAACTTTGTTGATATCAAAGATAAGAGAGGAATACCCG
GATAGAATGATGCTTACTTTCTCAGTTTTCCCATCTCCTAAGGTCTCTGA
TACTGTTGTTGAGCCTTACAACGCTACTCTCTCTGTACATCAGCTAGTTG
AAAATGCAGATGAGTGTATGGTTCTTGATAATGAAGCCCTTTATGACATC
TGTTTCCGCACTCTCNAACTCAGCACTCCAAGCTTTGGTGATCTGAATCA
TTTGATATCTGCTACAATGTCTGGAGTTACCTGTTGT
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