CN185039
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185039 vs. ExPASy Swiss-Prot
Match: LSM7_DICDI (Probable U6 snRNA-associated Sm-like protein LSm7 OS=Dictyostelium discoideum GN=lsm7 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.655e-16 Identity = 37/60 (61.67%), Postives = 49/60 (81.67%), Query Frame = 2 Query: 35 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 214 +KE++LDL KF+ K + VK TGGR+V G LKGYDQL+N+ LD+ EF+RDA+DPL TTD+ Sbjct: 8 KKESILDLQKFLGKEICVKFTGGREVQGILKGYDQLVNITLDQTQEFIRDAEDPLITTDE 67
BLAST of CN185039 vs. ExPASy Swiss-Prot
Match: LSM7_HUMAN (U6 snRNA-associated Sm-like protein LSm7 OS=Homo sapiens GN=LSM7 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.486e-14 Identity = 33/63 (52.38%), Postives = 48/63 (76.19%), Query Frame = 2 Query: 23 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTD 211 K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD K T+ Sbjct: 4 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTE 66
BLAST of CN185039 vs. ExPASy Swiss-Prot
Match: LSM7_MOUSE (U6 snRNA-associated Sm-like protein LSm7 OS=Mus musculus GN=Lsm7 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.357e-14 Identity = 33/63 (52.38%), Postives = 48/63 (76.19%), Query Frame = 2 Query: 23 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTD 211 K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD K T+ Sbjct: 4 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTMEYMRDPDDQYKLTE 66
BLAST of CN185039 vs. ExPASy Swiss-Prot
Match: LSM7_YEAST (U6 snRNA-associated Sm-like protein LSm7 OS=Saccharomyces cerevisiae GN=LSM7 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 6.706e-12 Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 2 Query: 35 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 205 ++E +LDLAK+ D ++VKL GG+ V G LKGYDQL+NLVLD+ VE++ + DD T Sbjct: 23 KREAILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNT 79
BLAST of CN185039 vs. ExPASy Swiss-Prot
Match: LSM7_SCHPO (U6 snRNA-associated Sm-like protein LSm7 OS=Schizosaccharomyces pombe GN=lsm7 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.758e-12 Identity = 30/53 (56.60%), Postives = 43/53 (81.13%), Query Frame = 2 Query: 35 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADD 193 RKE++LDL+++ D+ +Q TGGRQ+TG LKG+DQL+NLVLD+ E LR+ +D Sbjct: 21 RKESILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPED 73 The following BLAST results are available for this feature:
BLAST of CN185039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185039 ID=CN185039; Name=CN185039; organism=Citrus sinensis; type=EST; length=215bpback to top |