CN185032

Overview
NameCN185032
Unique NameCN185032
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length560
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2157 contig Csv1_Contig2157:25..584. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185032 vs. ExPASy Swiss-Prot
Match: CYT5_ARATH (Cysteine proteinase inhibitor 5 OS=Arabidopsis thaliana GN=CYS5 PE=2 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 3.495e-26
Identity = 59/112 (52.68%), Postives = 80/112 (71.43%), Query Frame = 1
Query:   52 FCCLIVLFLSVVPLLAAGDRKGALVGGWKPIEDPKEKHVMEIGQFAVTEYNKQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPS-TKKFEAVVWEKPWEHFKSLTSFKP 384
            F  L+ L + ++PL A+     A VGGW PI +  +  V+EIG+FAV+EYNK+S+S LKFE+V  GETQVVSGTNYRL +   DG   +K + A+VW+KPW  F++LTSF+P
Sbjct:    7 FLLLLSLVVVLLPLYASA---AARVGGWSPISNVTDPQVVEIGEFAVSEYNKRSESGLKFETVVSGETQVVSGTNYRLKVAANDGDGVSKNYLAIVWDKPWMKFRNLTSFEP 115          
BLAST of CN185032 vs. ExPASy Swiss-Prot
Match: CYT1_MAIZE (Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.975e-18
Identity = 44/98 (44.90%), Postives = 63/98 (64.29%), Query Frame = 1
Query:   97 AAGDRKGALVGGWKPIE-DPKEKHVMEIGQFAVTEYNKQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLTSFKPM 387
            +  D  G L GG K +  +  +  + E+ +FAV E+N+++ + L FE + K +TQVV+GT Y L + VKDG   K +EA VWEKPWE+FK L  FKP+
Sbjct:   32 SVADNAGMLAGGIKDVPANENDLQLQELARFAVNEHNQKANALLGFEKLVKAKTQVVAGTMYYLTIEVKDGEVKKLYEAKVWEKPWENFKQLQEFKPV 129          
BLAST of CN185032 vs. ExPASy Swiss-Prot
Match: CYT1_ORYSJ (Cysteine proteinase inhibitor 1 OS=Oryza sativa subsp. japonica GN=Os01g0803200 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 7.803e-18
Identity = 40/91 (43.96%), Postives = 63/91 (69.23%), Query Frame = 1
Query:  115 GALVGGWKPIEDPKEKHVMEIGQFAVTEYNKQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLTSFKPM 387
            G ++GG +P+ +  + H++++ +FAVTE+NK++ S L+FE +   + QVV+GT Y   + VK+G + K +EA VWEKPW  FK L  FKP+
Sbjct:   44 GPVLGGVEPVGNENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIEVKEGDAKKLYEAKVWEKPWMDFKELQEFKPV 134          
BLAST of CN185032 vs. ExPASy Swiss-Prot
Match: CYT8_ORYSJ (Cysteine proteinase inhibitor 8 OS=Oryza sativa subsp. japonica GN=Os03g0429000 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.270e-17
Identity = 51/117 (43.59%), Postives = 68/117 (58.12%), Query Frame = 1
Query:   49 RFCCLIVLFLSVVPLLAA---GDR-KGALVGGWKPIEDPKEKHVMEIGQFAVTEYNKQSKSALKFESVEKGETQVVSGTNYRLILVVKD-GPSTKKFEAVVWEKPWEHFKSLTSFKP 384
            R   L+ L L+V    AA   G+R  G LVGGW PI D  + H+ E+G +AV  +   S   L+F  V  GE QVVSG NYRL++   D   +T  + AVV+E+ W + + LTSFKP
Sbjct:    3 RIPLLLALLLAVSAAAAAQVGGNRGHGPLVGGWSPITDVGDPHIQELGGWAVERHASLSSDGLRFRRVTSGEQQVVSGMNYRLVVSASDPAGATASYVAVVYEQSWTNTRQLTSFKP 119          
BLAST of CN185032 vs. ExPASy Swiss-Prot
Match: CYT4_ARATH (Cysteine proteinase inhibitor 4 OS=Arabidopsis thaliana GN=CYS4 PE=3 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 5.592e-16
Identity = 50/112 (44.64%), Postives = 69/112 (61.61%), Query Frame = 1
Query:   61 LIVLFLSVVPLLAA--GDRKGALVGGWKPIEDPKEKHVMEIGQFAVTEYNKQSKSALKFESVEKGETQVVSGTNYRLILVVKD-GPSTKKFEAVVWEKPWEHFKSLTSFKPM 387
            LI L L ++PL++   G   G  +G  KPI++  +  V+ + ++A+ E+NK+SK  L F  V +G TQVVSGT Y L +  KD G   K +EAVV EK W H KSL SFK +
Sbjct:    6 LICLSLILLPLVSVVEGLGGGGGLGSRKPIKNVSDPDVVAVAKYAIEEHNKESKEKLVFVKVVEGTTQVVSGTKYDLKIAAKDGGGKIKNYEAVVVEKLWLHSKSLESFKAL 117          
BLAST of CN185032 vs. ExPASy Swiss-Prot
Match: CYT3_ARATH (Cysteine proteinase inhibitor 3 OS=Arabidopsis thaliana GN=CYS3 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.166e-13
Identity = 38/91 (41.76%), Postives = 53/91 (58.24%), Query Frame = 1
Query:  112 KGALVGGWKPIEDPKEKHVME-IGQFAVTEYNKQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLTSFK 381
            K  ++GG   +   +    +E + +FA+ E+NKQ    L+F+ + K   QVV+GT Y L L  K+G  TK FEA VW KPW +FK L  FK
Sbjct:   31 KTMMLGGVHDLRGNQNSGEIESLARFAIQEHNKQQNKILEFKKIVKAREQVVAGTMYHLTLEAKEGDQTKNFEAKVWVKPWMNFKQLQEFK 121          
BLAST of CN185032 vs. ExPASy Swiss-Prot
Match: CYT1_HORVU (Cysteine proteinase inhibitor OS=Hordeum vulgare GN=ICY PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.431e-13
Identity = 37/93 (39.78%), Postives = 57/93 (61.29%), Query Frame = 1
Query:  112 KGALVGGWK--PIEDPKEKHVMEIGQFAVTEYNKQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLTSFKP 384
            +G L+GG +  P     +   +E+ +FAV E+N ++ + L+FE + K   QVV+G  +   + VK+G + K +EA VWEK WE+FK L  FKP
Sbjct:   13 RGVLLGGVQDAPAGRENDLETIELARFAVAEHNAKANALLEFEKLVKVRQQVVAGCMHYFTIEVKEGGAKKLYEAKVWEKAWENFKQLQEFKP 105          
BLAST of CN185032 vs. ExPASy Swiss-Prot
Match: CYT6_ORYSJ (Cysteine proteinase inhibitor 6 OS=Oryza sativa subsp. japonica GN=Os03g0210200 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.289e-12
Identity = 43/99 (43.43%), Postives = 58/99 (58.59%), Query Frame = 1
Query:   91 LLAAGDRKGALVGGWKPIEDPKEKHVMEIGQFAVTEYNKQSKS-ALKFESVEKGETQVVSGTNYRLILVVKDGPS--TKKFEAVVWEKPWEHFKSLTSF 378
            LLAA     AL  GW PI++  + H+ E+G++A+TE N+ S S  L F  V  GE QVVSG NYRL +    G    T  + AVV+E+ W + + L SF
Sbjct:    9 LLAAVCAAAALPRGWSPIKNIDDPHIQELGRWAITENNRVSPSDELTFHRVTGGEQQVVSGMNYRLEIEAASGGGDVTGSYGAVVFEQEWSNTRKLISF 107          
BLAST of CN185032 vs. ExPASy Swiss-Prot
Match: CYT6_ARATH (Cysteine proteinase inhibitor 6 OS=Arabidopsis thaliana GN=CYS6 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.289e-12
Identity = 46/123 (37.40%), Postives = 66/123 (53.66%), Query Frame = 1
Query:   40 MNQRFCCLIVLF---LSVVPLLAAG----DRKGALVGGWKPIE-DPKEKHVMEIGQFAVTEYNKQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLTSFKP 384
            M  RF   IV F   L +  L+A+     + + ALVGG   +  +     V  + +FAV E+NK+  + L+F  V K + QVV+GT + L L + +    K +EA VW KPW +FK L  FKP
Sbjct:    2 MRSRFLLFIVFFSLSLFISSLIASDLGFCNEEMALVGGVGDVPANQNSGEVESLARFAVDEHNKKENALLEFARVVKAKEQVVAGTLHHLTLEILEAGQKKLYEAKVWVKPWLNFKELQEFKP 124          
BLAST of CN185032 vs. ExPASy Swiss-Prot
Match: CYTI_VIGUN (Cysteine proteinase inhibitor OS=Vigna unguiculata PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.872e-12
Identity = 37/89 (41.57%), Postives = 52/89 (58.43%), Query Frame = 1
Query:  118 ALVGGWKPIEDPKEK-HVMEIGQFAVTEYNKQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLTSFK 381
            A +GG + +   +    +  + +FAV E+NK+  + L+F  V   + QVVSGT Y + L  KDG   K +EA VWEKPW +FK L  FK
Sbjct:    2 AALGGNRDVAGNQNSLEIDSLARFAVEEHNKKQNALLEFGRVVSAQQQVVSGTLYTITLEAKDGGQKKVYEAKVWEKPWLNFKELQEFK 90          
The following BLAST results are available for this feature:
BLAST of CN185032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
CYT5_ARATH3.495e-2652.68Cysteine proteinase inhibitor 5 OS=Arabidopsis tha... [more]
CYT1_MAIZE5.975e-1844.90Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1[more]
CYT1_ORYSJ7.803e-1843.96Cysteine proteinase inhibitor 1 OS=Oryza sativa su... [more]
CYT8_ORYSJ2.270e-1743.59Cysteine proteinase inhibitor 8 OS=Oryza sativa su... [more]
CYT4_ARATH5.592e-1644.64Cysteine proteinase inhibitor 4 OS=Arabidopsis tha... [more]
CYT3_ARATH1.166e-1341.76Cysteine proteinase inhibitor 3 OS=Arabidopsis tha... [more]
CYT1_HORVU4.431e-1339.78Cysteine proteinase inhibitor OS=Hordeum vulgare G... [more]
CYT6_ORYSJ1.289e-1243.43Cysteine proteinase inhibitor 6 OS=Oryza sativa su... [more]
CYT6_ARATH1.289e-1237.40Cysteine proteinase inhibitor 6 OS=Arabidopsis tha... [more]
CYTI_VIGUN2.872e-1241.57Cysteine proteinase inhibitor OS=Vigna unguiculata... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006J16_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006J16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185032 ID=CN185032; Name=CN185032; organism=Citrus sinensis; type=EST; length=560bp
GAGGGGACTTTGGTGTGAACGGTTACCAAAACAACGAAAATGAATCAACG
TTTTTGCTGTCTTATTGTTCTCTTTCTCTCCGTGGTCCCTCTCCTGGCCG
CCGGCGACCGTAAAGGAGCGTTGGTTGGGGGATGGAAGCCGATAGAGGAC
CCCAAGGAGAAGCACGTGATGGAGATCGGGCAGTTCGCGGTGACGGAGTA
CAACAAACAGTCAAAGAGCGCGTTGAAGTTCGAGAGCGTGGAGAAGGGCG
AGACTCAGGTGGTTTCCGGCACCAATTACCGGCTGATCTTGGTCGTCAAG
GACGGACCTTCGACCAAGAAATTTGAAGCTGTCGTTTGGGAGAAGCCATG
GGAGCATTTCAAGAGTCTCACCTCGTTTAAGCCTATGGTTAAATAGGGTG
TTTAACAAATAACAATGCATGTAATCTCAGATTGATAATTATTAAGGTTT
TCGTTATGTGAGTGATGATATTATTATATTGTTTATGAATGTCAAAGCAA
CTCTCCCGTCATTTTTTTTTTTTAATATCCAAACTTGAACCTTTTCACAA
ACCCATTTCC
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