CN185031

Overview
NameCN185031
Unique NameCN185031
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length841
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN185031 vs. ExPASy Swiss-Prot
Match: NAC8_ARATH (NAC domain-containing protein 8 OS=Arabidopsis thaliana GN=NAC008 PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.272e-58
Identity = 131/271 (48.34%), Postives = 163/271 (60.15%), Query Frame = 2 
Query:   11 GGKAEKTNWVMHQYHLGTEEDEKDRDYVISKISYQQQQ---AKYGDKIEQDILEST-GAIIPKVDPVTPKLVTPDPPRTER-------------HPDFGPRQESPTTDAFDQQSEIRHVEEVQPLCENPGSNDKIE--AENHANVMVGNN-------DNGSQAGDDSKWWDSESQNILDTQQLAEALTLCEEFLNSQS-DGNANDGTSKGK-PGLSDYAQLGSEHLKKDLEECQMLVHDPANIELDTPPEFGLSQLEFNSQDSFIPFGGSK 739
            GGKA KTNWVMHQYHLG EEDEK+ DYV+SKI YQQ Q    K GDK EQ++ E    A+ P  DPVTPKL TP+P    R               D+    E    +  +       V+ +QP  E P S  ++E   EN A  M+ +        DN +Q  +D  W+DS SQ IL++QQL EAL+LC++ L SQ  + N N G+ K K P ++DYA LG E  K+DLEECQ +V DP+NIELDTPPEF LSQLEF SQDSF+ +G  K
Sbjct:  177 GGKAVKTNWVMHQYHLGIEEDEKEGDYVVSKIFYQQPQQLVVKRGDKAEQEVSEDIFAAVTPTADPVTPKLATPEPRNAVRICSDSHIASDYVTPSDYVSAHEVSLAETSEVMCMEDEVQSIQPNHERPSSGPELEHGLENGAKEMLDDKEEQEKDRDNENQGEEDPTWFDSGSQFILNSQQLVEALSLCDDLLGSQDREENTNSGSLKDKQPCIADYAHLGPEDFKRDLEECQKIVLDPSNIELDTPPEFRLSQLEFGSQDSFLAWGTGK 447
The following BLAST results are available for this feature:
BLAST of CN185031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NAC8_ARATH4.272e-5848.34NAC domain-containing protein 8 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0006J15_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006J15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185031 ID=CN185031; Name=CN185031; organism=Citrus sinensis; type=EST; length=841bp
GAGGGTCAGAGGAGGGAAAGCTGAGAAAACTAATTGGGTGATGCACCAGT
ATCACTTGGGAACAGAGGAGGATGAAAAGGATAGGGACTATGTTATATCT
AAAATATCTTATCAGCAGCAACAGGCCAAGTATGGTGATAAAATTGAACA
AGATATTCTTGAAAGCACTGGTGCCATCATTCCAAAAGTAGATCCAGTCA
CTCCCAAGTTAGTGACTCCAGACCCACCTCGTACTGAAAGGCATCCTGAT
TTTGGCCCACGGCAAGAGTCTCCTACTACAGATGCATTTGATCAGCAATC
TGAGATAAGGCATGTGGAAGAGGTTCAACCTTTATGTGAAAACCCCGGTT
CTAATGATAAAATTGAAGCAGAAAATCATGCTAATGTGATGGTTGGTAAT
AATGATAACGGAAGTCAAGCAGGAGACGACAGCAAATGGTGGGACAGTGA
ATCGCAGAATATCTTGGATACGCAACAACTAGCAGAAGCGCTGACTCTAT
GCGAGGAGTTCTTGAACAGCCAGTCTGATGGAAATGCAAATGACGGAACA
TCAAAGGGGAAACCTGGTCTTTCTGATTATGCTCAGTTAGGATCTGAACA
TTTGAAGAAGGATTTGGAGGAGTGTCAGATGCTAGTCCATGATCCTGCAA
ACATAGAACTCGATACACCTCCAGAATTTGGACTGAGCCAGCTTGAATTT
AACTCACAGGATAGTTTCATTCCATTCGGTGGAAGCAAGGCAATCAACTA
ATTCGTGGATTTCCAGTGTTTGCTTTTATGACAAACTTGCCTTCTAAACC
TTTCTCAGGACTTTTGAGCCGCAATTTTTTGCCCAATATCC
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