CN185018

Overview
NameCN185018
Unique NameCN185018
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length228
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185018 vs. ExPASy Swiss-Prot
Match: P2C60_ORYSJ (Probable protein phosphatase 2C 60 OS=Oryza sativa subsp. japonica GN=Os06g0717800 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 8.349e-34
Identity = 67/75 (89.33%), Postives = 73/75 (97.33%), Query Frame = -3
Query:    2 LQPHDQFVIFASDGLWEHLSNQEAVDIVQNHPQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 226
            LQPHDQF+IFASDGLWEHL+NQEAVDIV + P++GSARRL+KAALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT
Sbjct:  275 LQPHDQFLIFASDGLWEHLTNQEAVDIVHSSPRNGSARRLIKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 349          
BLAST of CN185018 vs. ExPASy Swiss-Prot
Match: P2C64_ARATH (Probable protein phosphatase 2C 64 OS=Arabidopsis thaliana GN=At4g38520 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.090e-33
Identity = 66/75 (88.00%), Postives = 72/75 (96.00%), Query Frame = -3
Query:    2 LQPHDQFVIFASDGLWEHLSNQEAVDIVQNHPQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 226
            L+PHDQF+I ASDGLWEH+SNQEAVDIVQNHP++G A+RLVK ALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT
Sbjct:  275 LEPHDQFIICASDGLWEHMSNQEAVDIVQNHPRNGIAKRLVKVALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 349          
BLAST of CN185018 vs. ExPASy Swiss-Prot
Match: P2C28_ORYSJ (Probable protein phosphatase 2C 28 OS=Oryza sativa subsp. japonica GN=Os03g0137200 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 9.231e-33
Identity = 65/75 (86.67%), Postives = 72/75 (96.00%), Query Frame = -3
Query:    2 LQPHDQFVIFASDGLWEHLSNQEAVDIVQNHPQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 226
            +QP+D FVIFASDGLWEHLSNQEAVD+VQN+P++G ARRLVK A+QEAAKKREMRYSDLKKIDRGVRRHFHDDIT
Sbjct:  276 IQPNDHFVIFASDGLWEHLSNQEAVDLVQNNPRNGIARRLVKVAMQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 350          
BLAST of CN185018 vs. ExPASy Swiss-Prot
Match: P2C79_ARATH (Probable protein phosphatase 2C 79 OS=Arabidopsis thaliana GN=At5g66080 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.686e-32
Identity = 66/75 (88.00%), Postives = 71/75 (94.67%), Query Frame = -3
Query:    2 LQPHDQFVIFASDGLWEHLSNQEAVDIVQNHPQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 226
            LQP DQF+IFASDGLWE LSNQEAV+IVQNHP++G ARRLVKAALQEAAKKREMRYSDL KI+RGVRRHFHDDIT
Sbjct:  276 LQPDDQFLIFASDGLWEQLSNQEAVEIVQNHPRNGIARRLVKAALQEAAKKREMRYSDLNKIERGVRRHFHDDIT 350          
BLAST of CN185018 vs. ExPASy Swiss-Prot
Match: P2C46_ARATH (Probable protein phosphatase 2C 46 OS=Arabidopsis thaliana GN=At3g51370 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.984e-32
Identity = 64/75 (85.33%), Postives = 71/75 (94.67%), Query Frame = -3
Query:    2 LQPHDQFVIFASDGLWEHLSNQEAVDIVQNHPQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 226
            +QP D+F+IFASDGLWE +SNQEAVDIVQNHP++G ARRLVK ALQEAAKKREMRYSDLKKI+RGVRRHFHDDIT
Sbjct:  273 IQPQDKFLIFASDGLWEQMSNQEAVDIVQNHPRNGIARRLVKMALQEAAKKREMRYSDLKKIERGVRRHFHDDIT 347          
BLAST of CN185018 vs. ExPASy Swiss-Prot
Match: P2C72_ORYSJ (Probable protein phosphatase 2C 72 OS=Oryza sativa subsp. japonica GN=Os10g0544900 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.741e-31
Identity = 63/75 (84.00%), Postives = 72/75 (96.00%), Query Frame = -3
Query:    2 LQPHDQFVIFASDGLWEHLSNQEAVDIVQNHPQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 226
            LQ  DQF+IFASDGLWEH+SNQEAVD+VQ++P++G ARRLVKAA+Q+AAKKREMRYSDLKKIDRGVRRHFHDDIT
Sbjct:  277 LQTTDQFIIFASDGLWEHISNQEAVDLVQHNPRNGIARRLVKAAMQQAAKKREMRYSDLKKIDRGVRRHFHDDIT 351          
BLAST of CN185018 vs. ExPASy Swiss-Prot
Match: P2C48_ARATH (Probable protein phosphatase 2C 48 OS=Arabidopsis thaliana GN=PP2C6 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 3.283e-30
Identity = 61/75 (81.33%), Postives = 70/75 (93.33%), Query Frame = -3
Query:    2 LQPHDQFVIFASDGLWEHLSNQEAVDIVQNHPQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 226
            + P DQF+IFASDGLWEHLSNQEAVDIV + P++G AR+LVKAALQEAAKKREMRYSDL+KI+RG+RRHFHDDIT
Sbjct:  278 IHPEDQFLIFASDGLWEHLSNQEAVDIVNSCPRNGVARKLVKAALQEAAKKREMRYSDLEKIERGIRRHFHDDIT 352          
BLAST of CN185018 vs. ExPASy Swiss-Prot
Match: P2C38_ARATH (Probable protein phosphatase 2C 38 OS=Arabidopsis thaliana GN=At3g12620 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.288e-30
Identity = 61/75 (81.33%), Postives = 68/75 (90.67%), Query Frame = -3
Query:    2 LQPHDQFVIFASDGLWEHLSNQEAVDIVQNHPQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 226
            + P DQF+IFASDGLWEHLSNQEAVDIV   P++G AR+L+K AL+EAAKKREMRYSDLKKIDRGVRRHFHDDIT
Sbjct:  277 IHPEDQFLIFASDGLWEHLSNQEAVDIVNTCPRNGIARKLIKTALREAAKKREMRYSDLKKIDRGVRRHFHDDIT 351          
BLAST of CN185018 vs. ExPASy Swiss-Prot
Match: P2C36_ORYSJ (Probable protein phosphatase 2C 36 OS=Oryza sativa subsp. japonica GN=Os03g0832400 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.128e-29
Identity = 60/75 (80.00%), Postives = 68/75 (90.67%), Query Frame = -3
Query:    2 LQPHDQFVIFASDGLWEHLSNQEAVDIVQNHPQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 226
            LQP D F+IFASDGLWEHLSNQ+AV+IV NH ++GSARRL+KAAL EAA+KREMRYSDL KID+ VRRHFHDDIT
Sbjct:  283 LQPSDCFIIFASDGLWEHLSNQQAVEIVHNHQRAGSARRLIKAALHEAARKREMRYSDLMKIDKKVRRHFHDDIT 357          
BLAST of CN185018 vs. ExPASy Swiss-Prot
Match: P2C42_ARATH (Probable protein phosphatase 2C 42 OS=Arabidopsis thaliana GN=At3g17090 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.779e-29
Identity = 57/75 (76.00%), Postives = 70/75 (93.33%), Query Frame = -3
Query:    2 LQPHDQFVIFASDGLWEHLSNQEAVDIVQNHPQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 226
            L P+D F+IFASDGLWEHL+N++AV+IV NHP++GSA+RL+KAAL EAA+KREMRYSDL+KID+ VRRHFHDDIT
Sbjct:  278 LHPNDSFLIFASDGLWEHLTNEKAVEIVHNHPRAGSAKRLIKAALHEAARKREMRYSDLRKIDKKVRRHFHDDIT 352          
The following BLAST results are available for this feature:
BLAST of CN185018 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
P2C60_ORYSJ8.349e-3489.33Probable protein phosphatase 2C 60 OS=Oryza sativa... [more]
P2C64_ARATH1.090e-3388.00Probable protein phosphatase 2C 64 OS=Arabidopsis ... [more]
P2C28_ORYSJ9.231e-3386.67Probable protein phosphatase 2C 28 OS=Oryza sativa... [more]
P2C79_ARATH2.686e-3288.00Probable protein phosphatase 2C 79 OS=Arabidopsis ... [more]
P2C46_ARATH5.984e-3285.33Probable protein phosphatase 2C 46 OS=Arabidopsis ... [more]
P2C72_ORYSJ1.741e-3184.00Probable protein phosphatase 2C 72 OS=Oryza sativa... [more]
P2C48_ARATH3.283e-3081.33Probable protein phosphatase 2C 48 OS=Arabidopsis ... [more]
P2C38_ARATH4.288e-3081.33Probable protein phosphatase 2C 38 OS=Arabidopsis ... [more]
P2C36_ORYSJ2.128e-2980.00Probable protein phosphatase 2C 36 OS=Oryza sativa... [more]
P2C42_ARATH2.779e-2976.00Probable protein phosphatase 2C 42 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006J04_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006J04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185018 ID=CN185018; Name=CN185018; organism=Citrus sinensis; type=EST; length=228bp
CTGTGATGTCATCGTGGAAATGCCGGCGGACGCCACGGTCTATCTTCTTC
AAGTCAGAATATCTCATTTCTCTCTTTTTTGCTGCTTCTTGTAAAGCAGC
TTTCACAAGCCTCCTTGCACTTCCACTCTGTGGATGATTTTGAACTATAT
CAACTGCTTCTTGATTACTTAGGTGTTCCCAGAGCCCATCAGATGCAAAT
ATTACAAATTGATCATGTGGTTGCAGCT
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