CN184995

Overview
NameCN184995
Unique NameCN184995
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9384 contig Csv1_Contig9384:25..727. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184995 vs. ExPASy Swiss-Prot
Match: ABIL1_ARATH (Protein ABIL1 OS=Arabidopsis thaliana GN=ABIL1 PE=1 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.249e-70
Identity = 129/166 (77.71%), Postives = 146/166 (87.95%), Query Frame = 2
Query:  203 MEVELPRLGNRAMTFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQQQLLAFIPRHHKHYILPNSVNKKVHFSPRVPTDAKQNHFSS 700
            ME E+  + N AMT DEVSMER+KSFVKALQELKNLRPQLYSAA+YCEKSYLHSEQKQMVLDNLKDY V+ALVNAVDHLGTVA KLTDL + Q SD+STME+R SC++Q+LLTC+TY +KEGLRQQQLLA IP HHKHYILPNSVNK+VHFSP   TD +QNH+ +
Sbjct:    1 METEISGMDNPAMTLDEVSMERNKSFVKALQELKNLRPQLYSAADYCEKSYLHSEQKQMVLDNLKDYTVKALVNAVDHLGTVASKLTDLFDHQNSDISTMEMRASCVSQQLLTCRTYIDKEGLRQQQLLAVIPLHHKHYILPNSVNKRVHFSPLRRTDTRQNHYQA 166          
BLAST of CN184995 vs. ExPASy Swiss-Prot
Match: ABIL1_ORYSJ (Probable protein ABIL1 OS=Oryza sativa subsp. japonica GN=Os01g0622700 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.999e-60
Identity = 113/151 (74.83%), Postives = 129/151 (85.43%), Query Frame = 2
Query:  227 GNRAMTFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQQQLLAFIPRHHKHYILPNSVNKKVHFSPRVPTDA 679
            G    T DE SMERSKSFVKALQELKNLRPQLYSA+EYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDL EQQ S+VST+EL+V+C+NQ++LTCQTY++KEG+RQQQ+     RHHKHYI+P   NK++     + TDA
Sbjct:   27 GPAPTTVDEASMERSKSFVKALQELKNLRPQLYSASEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLYEQQASEVSTLELKVACLNQQVLTCQTYTDKEGIRQQQMTGTATRHHKHYIVPTLANKRMQAFSEMQTDA 177          
BLAST of CN184995 vs. ExPASy Swiss-Prot
Match: ABIL4_ORYSJ (Probable protein ABIL4 OS=Oryza sativa subsp. japonica GN=Os05g0585400 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.769e-54
Identity = 105/149 (70.47%), Postives = 129/149 (86.58%), Query Frame = 2
Query:  242 TFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQQQLLAFIPRHHKHYILPNSVNKKVHFSPRVPTDAKQN 688
            T DE SMERSKSFVKALQELKNLRPQLYSA+EYCEKSYLHSEQKQMVL+NLKDYAVRA+VNAVDHLGTVAYKLTDL EQQ S+VST+EL+V+ +NQ++LTCQ ++++ GLRQQ++     +HHKHYILP++ +K+   + R+ TD  Q+
Sbjct:   23 TVDEASMERSKSFVKALQELKNLRPQLYSASEYCEKSYLHSEQKQMVLENLKDYAVRAVVNAVDHLGTVAYKLTDLFEQQASEVSTVELKVARLNQQILTCQIFTDRAGLRQQKIGGTTFKHHKHYILPSTGHKRTQ-AARLQTDNGQD 170          
BLAST of CN184995 vs. ExPASy Swiss-Prot
Match: ABIL2_ARATH (Protein ABIL2 OS=Arabidopsis thaliana GN=ABIL2 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.650e-36
Identity = 73/133 (54.89%), Postives = 96/133 (72.18%), Query Frame = 2
Query:  230 NRAMTFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQQQLLAFIPRHHKHYILP 628
            + A  +DEVSM++S  F   LQ+LKNLR QLYSAAEY E SY   ++KQ+V++ LKDYAV+ALVN VDHLG+V YK+ D ++++  +VS  ELRVSC+ Q+L  CQ Y + EG  QQ L+   P+ HK YILP
Sbjct:    5 HEASNYDEVSMQQSMLFSDGLQDLKNLRAQLYSAAEYFELSYTTDDKKQIVVETLKDYAVKALVNTVDHLGSVTYKVNDFIDEKVDEVSETELRVSCIEQRLRMCQEYMDHEGRSQQSLVIDTPKFHKRYILP 137          
BLAST of CN184995 vs. ExPASy Swiss-Prot
Match: ABIL3_ARATH (Protein ABIL3 OS=Arabidopsis thaliana GN=ABIL3 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.305e-35
Identity = 71/137 (51.82%), Postives = 99/137 (72.26%), Query Frame = 2
Query:  236 AMTFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQQQLLAFIPRHHKHYILPNSVNKK 646
            A  +DE+SM++S  F  +L++LKNLR QLYSAAEY E SY + EQKQ+V++ LKDYA++ALVN VDHLG+V YK+ D ++++  +V+  ELRVSC+ Q+L  CQ Y + EG  QQ L+   P+ HK Y LP+   K+
Sbjct:   13 ASNYDEISMQQSMLFSDSLKDLKNLRTQLYSAAEYFELSYTNDEQKQIVVETLKDYAIKALVNTVDHLGSVTYKVNDFVDEKVDEVAGTELRVSCIEQRLRMCQEYMDHEGRSQQSLVIDTPKFHKRYFLPSGEIKR 149          
BLAST of CN184995 vs. ExPASy Swiss-Prot
Match: ABIL2_ORYSJ (Putative protein ABIL2 OS=Oryza sativa subsp. japonica GN=Os01g0551800 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.070e-29
Identity = 61/134 (45.52%), Postives = 93/134 (69.40%), Query Frame = 2
Query:  227 GNRAMTFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQQQLLAFIPRHHKHYILP 628
            G  + T +EV M+ +  F   +++LK L+ QLYSAAEY E +Y   + KQ V++NLK+Y+V+ALVN VDHLG++++K++ L++Q+  +V    LRVSC++Q+    Q   +KEGL QQ L+   P++HK YILP
Sbjct:   17 GMSSSTLEEVQMQETLIFSDTIKDLKMLKSQLYSAAEYFELAYTQEDDKQEVMNNLKEYSVKALVNTVDHLGSISFKVSSLIDQRFDEVDDTNLRVSCIHQRAQVSQACMDKEGLSQQSLVITAPKYHKRYILP 150          
BLAST of CN184995 vs. ExPASy Swiss-Prot
Match: ABIL4_ARATH (Protein ABIL4 OS=Arabidopsis thaliana GN=ABIL4 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.914e-27
Identity = 59/133 (44.36%), Postives = 85/133 (63.91%), Query Frame = 2
Query:  230 NRAMTFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQQQLLAFIPRHHKHYILP 628
            +++   DE+ M+++  F + L++LKNLR QLYSAAEY E SY  +E K+ V++ LK+YA +A+VN VDHLG+V+ K    L   ++  ST  LR+S + Q++  C+ Y  K G  Q  LL   PRHHK Y  P
Sbjct:   12 HQSSNHDELFMKQTLQFSETLKDLKNLRKQLYSAAEYFETSYGKAEHKETVIETLKEYAAKAVVNTVDHLGSVSDKFNSFLSDNSTHFSTTHLRLSSLEQRMRLCRDYMGKSGTHQHLLLFQYPRHHKRYFFP 144          
BLAST of CN184995 vs. ExPASy Swiss-Prot
Match: ABIL3_ORYSJ (Probable protein ABIL3 OS=Oryza sativa subsp. japonica GN=Os01g0236400 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.446e-26
Identity = 62/149 (41.61%), Postives = 96/149 (64.43%), Query Frame = 2
Query:  248 DEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQQQLLAFIPRHHKHYILPNS--VNKKVHFSPRVPTDAKQN 688
            D  S++    F  +L++L+NLR QLYSAAEY E  Y ++ QK  V+ +LKDY V ALV+ VDHLG V+YK+ +L+++++ +V+  E RVS + Q++  CQ   ++EG  QQ LL   P++H+ YILP +  V   +H     P  ++Q+
Sbjct:   26 DMSSLQEGLLFSDSLKDLRNLRSQLYSAAEYFEVFYRNNSQKSTVMTSLKDYTVEALVSTVDHLGFVSYKVDNLVKERSDEVNETEFRVSSVEQRVRICQQTIDQEGRSQQSLLIRAPKYHRRYILPGTDIVESAIHPVSEPPRYSRQH 174          
BLAST of CN184995 vs. ExPASy Swiss-Prot
Match: ABIL5_ORYSJ (Probable protein ABIL5 OS=Oryza sativa subsp. japonica GN=Os01g0760900 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.364e-15
Identity = 40/100 (40.00%), Postives = 69/100 (69.00%), Query Frame = 2
Query:  257 SMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYS 556
            S+  +  F  AL+ELK+LR QL+  A+ CEK++L +E+K+++L++ K Y   A+V  +DHLGTV+ KL   L Q+  +++  E +++ + Q+LLTC+ Y+
Sbjct:   31 SLIGAAGFDGALRELKDLRSQLHQTADCCEKAFLDTEKKKLILESTKGYICDAIVAVIDHLGTVSSKLEQQL-QEKIEITQTEKKLNFLKQRLLTCEQYA 129          
The following BLAST results are available for this feature:
BLAST of CN184995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
ABIL1_ARATH1.249e-7077.71Protein ABIL1 OS=Arabidopsis thaliana GN=ABIL1 PE=... [more]
ABIL1_ORYSJ1.999e-6074.83Probable protein ABIL1 OS=Oryza sativa subsp. japo... [more]
ABIL4_ORYSJ4.769e-5470.47Probable protein ABIL4 OS=Oryza sativa subsp. japo... [more]
ABIL2_ARATH7.650e-3654.89Protein ABIL2 OS=Arabidopsis thaliana GN=ABIL2 PE=... [more]
ABIL3_ARATH1.305e-3551.82Protein ABIL3 OS=Arabidopsis thaliana GN=ABIL3 PE=... [more]
ABIL2_ORYSJ1.070e-2945.52Putative protein ABIL2 OS=Oryza sativa subsp. japo... [more]
ABIL4_ARATH2.914e-2744.36Protein ABIL4 OS=Arabidopsis thaliana GN=ABIL4 PE=... [more]
ABIL3_ORYSJ1.446e-2641.61Probable protein ABIL3 OS=Oryza sativa subsp. japo... [more]
ABIL5_ORYSJ4.364e-1540.00Probable protein ABIL5 OS=Oryza sativa subsp. japo... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0006I12_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006I12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184995 ID=CN184995; Name=CN184995; organism=Citrus sinensis; type=EST; length=703bp
GAGGATTCCCACTTCTCGGAATCGCTTTCACTTCACTCATCATCCTTTCT
TAGCCCTCTTTTATTCCTTTCTCTATTATTAGATTAACTATCTCACCAAA
ACCCAACCTCAAATCTAAATTGTTAATGATAGTAATCTCGTTTGTGAATT
ATTTTAGTTTTATGATTTGAAACTTTAGGGTTTTGTTTGATCGAGCTGAG
AGATGGAAGTGGAGCTACCGAGGCTGGGTAATCGTGCCATGACTTTCGAT
GAGGTCTCCATGGAGCGTAGCAAAAGCTTCGTCAAAGCTTTGCAGGAGCT
CAAGAACTTAAGACCTCAACTGTATTCAGCTGCAGAATATTGTGAAAAGT
CTTATCTTCACAGTGAGCAGAAACAAATGGTACTTGATAACCTAAAAGAC
TATGCTGTAAGAGCGCTGGTCAATGCTGTTGATCACCTTGGCACTGTGGC
TTACAAGTTAACTGACCTTCTTGAGCAGCAAACATCTGATGTCTCAACCA
TGGAGCTAAGGGTTTCTTGTATGAACCAGAAACTTCTTACATGCCAAACC
TACTCAAATAAAGAAGGTCTCCGGCAGCAACAGTTATTGGCGTTCATCCC
AAGACATCACAAGCATTACATTTTACCAAATTCTGTGAACAAGAAGGTAC
ATTTTAGTCCACGTGTACCAACTGATGCTAAGCAAAATCATTTTTCATCA
CGT
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