CN184994

Overview
NameCN184994
Unique NameCN184994
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig164 contig Csv1_Contig164:32..804. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: PRS7_PRUPE (26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2 SV=1)

HSP 1 Score: 337.421 bits (864), Expect = 7.427e-95
Identity = 168/169 (99.41%), Postives = 169/169 (100.00%), Query Frame = -1 
Query:  266 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQ 772
            GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGM+AIRARRKTVTEKDFLDAVNKVIKGYQ
Sbjct:  245 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQ 413

HSP 2 Score: 31.9574 bits (71), Expect = 7.427e-95
Identity = 13/16 (81.25%), Postives = 14/16 (87.50%), Query Frame = -3 
Query:  231 QGISKFSATPKYMVYN 278
            +G  KFSATPKYMVYN
Sbjct:  410 KGYQKFSATPKYMVYN 425
[Close]
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: PRS7A_ARATH (26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana GN=RPT1A PE=2 SV=1)

HSP 1 Score: 337.421 bits (864), Expect = 7.427e-95
Identity = 168/169 (99.41%), Postives = 169/169 (100.00%), Query Frame = -1 
Query:  266 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQ 772
            GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGM+AIRARRKTVTEKDFLDAVNKVIKGYQ
Sbjct:  246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQ 414

HSP 2 Score: 31.9574 bits (71), Expect = 7.427e-95
Identity = 13/16 (81.25%), Postives = 14/16 (87.50%), Query Frame = -3 
Query:  231 QGISKFSATPKYMVYN 278
            +G  KFSATPKYMVYN
Sbjct:  411 KGYQKFSATPKYMVYN 426
[Close]
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 2.151e-94
Identity = 167/169 (98.82%), Postives = 168/169 (99.41%), Query Frame = -1 
Query:  266 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQ 772
            GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE RTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGM+AIRARRKTVTEKDFLDAVNKVIKGYQ
Sbjct:  246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQ 414

HSP 2 Score: 31.9574 bits (71), Expect = 2.151e-94
Identity = 13/16 (81.25%), Postives = 14/16 (87.50%), Query Frame = -3 
Query:  231 QGISKFSATPKYMVYN 278
            +G  KFSATPKYMVYN
Sbjct:  411 KGYQKFSATPKYMVYN 426
[Close]
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 2.151e-94
Identity = 167/169 (98.82%), Postives = 168/169 (99.41%), Query Frame = -1 
Query:  266 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQ 772
            GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE RTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGM+AIRARRKTVTEKDFLDAVNKVIKGYQ
Sbjct:  246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQ 414

HSP 2 Score: 31.9574 bits (71), Expect = 2.151e-94
Identity = 13/16 (81.25%), Postives = 14/16 (87.50%), Query Frame = -3 
Query:  231 QGISKFSATPKYMVYN 278
            +G  KFSATPKYMVYN
Sbjct:  411 KGYQKFSATPKYMVYN 426
[Close]
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: PRS7B_ARATH (26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana GN=RPT1B PE=3 SV=2)

HSP 1 Score: 310.457 bits (794), Expect = 1.277e-85
Identity = 154/169 (91.12%), Postives = 161/169 (95.27%), Query Frame = -1 
Query:  266 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQ 772
            GARMVRELFQMARSKKACI+FFDE+DAIGGARFDDGVG DNEVQRTMLEI+ QLDGFDARGNIKVLMATNRPD LDPALLRPGRLDRKVEF LPDLE RTQIFKIHTRTM+CERDIRFELLA LCPNSTGADIRSVC EAGM+AI ARRK+VTEKDFLDAVNKV+KGYQ
Sbjct:  283 GARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDAVNKVVKGYQ 451

HSP 2 Score: 28.1054 bits (61), Expect = 1.277e-85
Identity = 11/15 (73.33%), Postives = 12/15 (80.00%), Query Frame = -3 
Query:  234 QGISKFSATPKYMVY 278
            +G  KFSATPKYM Y
Sbjct:  448 KGYQKFSATPKYMAY 462
[Close]
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: PRS7_XENLA (26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 3.390e-83
Identity = 145/168 (86.31%), Postives = 158/168 (94.05%), Query Frame = -1 
Query:  269 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGY 772
            GARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD RGNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFELLARLCPNSTGA+IRSVCTEAGMFAIRARRK  TEKDFL+AVNKVIK Y
Sbjct:  253 GARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVNKVIKSY 420

HSP 2 Score: 27.335 bits (59), Expect = 3.390e-83
Identity = 10/13 (76.92%), Postives = 12/13 (92.31%), Query Frame = -3 
Query:  231 SKFSATPKYMVYN 269
            +KFSATP+YM YN
Sbjct:  421 AKFSATPRYMTYN 433
[Close]
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: PRS7_RAT (26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2 PE=1 SV=3)

HSP 1 Score: 302.753 bits (774), Expect = 4.421e-83
Identity = 145/168 (86.31%), Postives = 158/168 (94.05%), Query Frame = -1 
Query:  269 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGY 772
            GARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD RGNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFELLARLCPNSTGA+IRSVCTEAGMFAIRARRK  TEKDFL+AVNKVIK Y
Sbjct:  253 GARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSY 420

HSP 2 Score: 27.335 bits (59), Expect = 4.421e-83
Identity = 10/13 (76.92%), Postives = 12/13 (92.31%), Query Frame = -3 
Query:  231 SKFSATPKYMVYN 269
            +KFSATP+YM YN
Sbjct:  421 AKFSATPRYMTYN 433
[Close]
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: PRS7_MOUSE (26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1 SV=5)

HSP 1 Score: 302.753 bits (774), Expect = 4.421e-83
Identity = 145/168 (86.31%), Postives = 158/168 (94.05%), Query Frame = -1 
Query:  269 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGY 772
            GARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD RGNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFELLARLCPNSTGA+IRSVCTEAGMFAIRARRK  TEKDFL+AVNKVIK Y
Sbjct:  253 GARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSY 420

HSP 2 Score: 27.335 bits (59), Expect = 4.421e-83
Identity = 10/13 (76.92%), Postives = 12/13 (92.31%), Query Frame = -3 
Query:  231 SKFSATPKYMVYN 269
            +KFSATP+YM YN
Sbjct:  421 AKFSATPRYMTYN 433
[Close]
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: PRS7_MACFA (26S protease regulatory subunit 7 OS=Macaca fascicularis GN=PSMC2 PE=2 SV=3)

HSP 1 Score: 302.753 bits (774), Expect = 4.421e-83
Identity = 145/168 (86.31%), Postives = 158/168 (94.05%), Query Frame = -1 
Query:  269 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGY 772
            GARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD RGNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFELLARLCPNSTGA+IRSVCTEAGMFAIRARRK  TEKDFL+AVNKVIK Y
Sbjct:  253 GARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSY 420

HSP 2 Score: 27.335 bits (59), Expect = 4.421e-83
Identity = 10/13 (76.92%), Postives = 12/13 (92.31%), Query Frame = -3 
Query:  231 SKFSATPKYMVYN 269
            +KFSATP+YM YN
Sbjct:  421 AKFSATPRYMTYN 433
[Close]
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: PRS7_HUMAN (26S protease regulatory subunit 7 OS=Homo sapiens GN=PSMC2 PE=1 SV=3)

HSP 1 Score: 302.753 bits (774), Expect = 4.421e-83
Identity = 145/168 (86.31%), Postives = 158/168 (94.05%), Query Frame = -1 
Query:  269 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGY 772
            GARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD RGNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFELLARLCPNSTGA+IRSVCTEAGMFAIRARRK  TEKDFL+AVNKVIK Y
Sbjct:  253 GARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSY 420

HSP 2 Score: 27.335 bits (59), Expect = 4.421e-83
Identity = 10/13 (76.92%), Postives = 12/13 (92.31%), Query Frame = -3 
Query:  231 SKFSATPKYMVYN 269
            +KFSATP+YM YN
Sbjct:  421 AKFSATPRYMTYN 433
The following BLAST results are available for this feature:
BLAST of CN184994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 337
Match NameE-valueIdentityDescription
PRS7_PRUPE7.427e-9599.4126S protease regulatory subunit 7 OS=Prunus persic... [more]
PRS7A_ARATH7.427e-9599.4126S protease regulatory subunit 7 homolog A OS=Ara... [more]
PRS7_SPIOL2.151e-9498.8226S protease regulatory subunit 7 OS=Spinacia oler... [more]
PRS7_ORYSJ2.151e-9498.8226S protease regulatory subunit 7 OS=Oryza sativa ... [more]
PRS7B_ARATH1.277e-8591.1226S protease regulatory subunit 7 homolog B OS=Ara... [more]
PRS7_XENLA3.390e-8386.3126S protease regulatory subunit 7 OS=Xenopus laevi... [more]
PRS7_RAT4.421e-8386.3126S protease regulatory subunit 7 OS=Rattus norveg... [more]
PRS7_MOUSE4.421e-8386.3126S protease regulatory subunit 7 OS=Mus musculus ... [more]
PRS7_MACFA4.421e-8386.3126S protease regulatory subunit 7 OS=Macaca fascic... [more]
PRS7_HUMAN4.421e-8386.3126S protease regulatory subunit 7 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006I11_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006I11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184994 ID=CN184994; Name=CN184994; organism=Citrus sinensis; type=EST; length=772bp
GAGGATTTAATTGAATGTTCTAACAGACATTGGAAAATCCACGTAATTAT
GAAATCATACAAAATGGTTCTTGAGAGGGCAAATGTTACACAAACACAGC
AAGTTTAAACAACAGAGAATCAAATTGATGGGACAGCCTCTCAAAGGAAC
TTCATGATCTTGGATAACCCTCTGAGAAGGTGGAACAATTGCGTCCAAGC
ATCTCTCCAGAAAGAAAAACATCGGAATCAATTGTAGACCATATATTTAG
GCGTTGCACTGAACTTTGATATCCCTTGATGACTTTGTTCACTGCATCGA
GGAAGTCTTTCTCTGTCACTGTTTTTCTTCGTGCCCGGATGGCAAACATC
CCAGCTTCTGTGCATACACTCCTTATATCAGCTCCTGTGGAATTGGGGCA
AAGCCTAGCCAAGAGCTCAAAGCGGATATCTCTTTCACAGTTCATTGTTC
GCGTGTGGATCTTAAATATCTGTGTCCGGCTCTCCAAATCAGGAAGGCCA
AACTCAACCTTACGATCTAATCGTCCGGGACGCAACAGGGCCGGATCAAG
TGTGTCAGGCCTGTTTGTTGCCATTAGAACTTTGATATTTCCACGAGCAT
CAAACCCATCAAGCTGATTCACAATTTCAAGCATTGTGCGTTGAACCTCG
TTGTCCCCGCCAACACCATCATCAAAACGTGCACCTCCTATAGCATCAAC
TTCATCAAAGAAGACAATACAAGCCTTCTTTGAACGTGCCATCTGAAATA
GTTCGCGAACCATACGAGCTCC
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