CN184992
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCB_ARATH (Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Arabidopsis thaliana GN=At2g20420 PE=1 SV=1) HSP 1 Score: 423.705 bits (1088), Expect = 6.533e-118 Identity = 209/259 (80.69%), Postives = 240/259 (92.66%), Query Frame = 1 Query: 85 VRGLLNKLVSRSLTVAGQWQQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 +RGL+NKLVSRSL+++G+WQ QQLRRLNIHEYQGAELM KYG+NVPKG+A +S++EVKKA QDVFP+ ELVVKSQILAGGRGLGTFKSGLKGGVHIVK++E E++AGKMLGQ+LVTKQTGPQGK+VSKVYLCEKLSLVNEMYF+I+LDRK+AGP+II C KGGTSIEDLAEK+P+MI+KVPIDVF GITDEDAAKVVDGLAPK ADR D+IEQVKKLY+LF ++DCT+LEINPLAETS QLVAADAK+ F AAFR Sbjct: 1 MRGLVNKLVSRSLSISGKWQNQQLRRLNIHEYQGAELMGKYGVNVPKGVAASSLEEVKKAIQDVFPNESELVVKSQILAGGRGLGTFKSGLKGGVHIVKRDEAEEIAGKMLGQVLVTKQTGPQGKVVSKVYLCEKLSLVNEMYFSIILDRKSAGPLIIACKKGGTSIEDLAEKFPDMIIKVPIDVFAGITDEDAAKVVDGLAPKAADRKDSIEQVKKLYELFRKTDCTMLEINPLAETSTNQLVAADAKLNFDDNAAFR 259
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCB_ORYSJ (Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Oryza sativa subsp. japonica GN=Os02g0621700 PE=1 SV=1) HSP 1 Score: 416.387 bits (1069), Expect = 1.043e-115 Identity = 210/260 (80.77%), Postives = 230/260 (88.46%), Query Frame = 1 Query: 82 MVRGLLNKLVSRSLTVAGQWQQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 MVRG L KL SR+L+VAG+WQ QQLRRLNIHEYQGAELM KYGINVP+G A SV+EVK ++VFP KE+VVKSQILAGGRGLGTFKSGL+GGVHIVK EE E LA KMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAI LDR TAGP+II CSKGGTSIEDLAEKYP+MI+KVPIDVF GITD+DAAKVVDGLAPK ADR +IEQ+KKLY+LFC+SDCTLLEINPLAET+ +LVAADAK+ F AAFR Sbjct: 1 MVRGSLGKLASRALSVAGKWQHQQLRRLNIHEYQGAELMGKYGINVPRGAAAGSVEEVKNTLKNVFPSEKEIVVKSQILAGGRGLGTFKSGLQGGVHIVKAEEAESLAAKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAITLDRNTAGPLIIACSKGGTSIEDLAEKYPDMIIKVPIDVFKGITDDDAAKVVDGLAPKTADRQSSIEQIKKLYELFCKSDCTLLEINPLAETADNKLVAADAKLNFDDNAAFR 260
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCB1_DICDI (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Dictyostelium discoideum GN=scsC PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.255e-52 Identity = 110/238 (46.22%), Postives = 154/238 (64.71%), Query Frame = 1 Query: 151 QLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 Q R LN+HEYQ ++M YGIN P G + +E +K + + + ++LVVK+Q+LAGGRG G F SGLKGGV + E+V+ A KMLG LVTKQTG GK+V +VY+ E+ L EMYFAI++DRK GP+++ +GG IE +A P+ I K PID+ G+ E ++ + L + + A +Q+KKLY F ++DCTL+EINPLAET+ ++ DAK+ F AAFR Sbjct: 31 QKRFLNVHEYQAQKMMKSYGINCPVGNVAETPEEAEKIAEVM--NTQDLVVKAQVLAGGRGKGIFTSGLKGGVQLCSSAEDVKKFASKMLGHTLVTKQTGEDGKVVHQVYVTERHFLRKEMYFAILMDRKAGGPVMVASPEGGVDIEGVARDNPSAIFKEPIDIMIGVQPEQTKRLAEKLGFSKKNISMAQDQMKKLYDFFIKNDCTLVEINPLAETASGDVLCMDAKLNFDDNAAFR 266
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCB1_PIG (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial (Fragment) OS=Sus scrofa GN=SUCLA2 PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.418e-50 Identity = 108/245 (44.08%), Postives = 157/245 (64.08%), Query Frame = 1 Query: 136 QWQQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 Q QQQQ R L++HEY EL+ + G+++PKG S DE + + K++V+K+Q+LAGGRG GTF+SGLKGGV IV EE + ++ +M+G+ L TKQTG +G+I ++V +CE+ E YFAI ++R GP++IG S+GG +IED+A + P IVK PID+ GI E A ++ G P + D A E + KLY LF + D T++EINP+ E S ++ DAK+ F +A+R Sbjct: 6 QIQQQQQRNLSLHEYMSMELLQEAGVSIPKGHVAKSPDEAYAIAKKL--GSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERRYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIVKEPIDIVEGIKKEQAVRLAQKMGFPPSIVD--SAAENMIKLYNLFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYR 246
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCB1_MOUSE (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Mus musculus GN=Sucla2 PE=1 SV=2) HSP 1 Score: 196.823 bits (499), Expect = 1.299e-49 Identity = 108/245 (44.08%), Postives = 156/245 (63.67%), Query Frame = 1 Query: 136 QWQQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 Q QQQQ R L++HEY EL+ + G++VPKG S DE + + K++V+K+Q+LAGGRG GTF SGLKGGV IV EE + ++ +M+GQ L+TKQTG +G+I ++V +CE+ E YFAI ++R GP++IG ++GG +IED+A + P IVK PID+ GI E A + G + D A E + KLY LF + D T++EINP+ E S +++ DAK+ F +A+R Sbjct: 44 QVQQQQQRTLSLHEYLSMELLQEAGVSVPKGFVAKSSDEAYAIAKKL--GSKDVVIKAQVLAGGRGKGTFTSGLKGGVKIVFSPEEAKAVSSQMIGQKLITKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSAQGGVNIEDVAAENPEAIVKEPIDIVEGIKKEQAVTLAQKMGFPSNIVD--SAAENMIKLYNLFLKYDATMVEINPMVEDSDGKVLCMDAKINFDSNSAYR 284
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCB1_HUMAN (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Homo sapiens GN=SUCLA2 PE=1 SV=3) HSP 1 Score: 196.438 bits (498), Expect = 1.696e-49 Identity = 107/245 (43.67%), Postives = 156/245 (63.67%), Query Frame = 1 Query: 136 QWQQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 Q QQQQ R L++HEY EL+ + G++VPKG S DE + + K++V+K+Q+LAGGRG GTF+SGLKGGV IV EE + ++ +M+G+ L TKQTG +G+I ++V +CE+ E YFAI ++R GP++IG S GG +IED+A + P I+K PID+ GI E A ++ G P + + A E + KLY LF + D T++EINP+ E S ++ DAK+ F +A+R Sbjct: 44 QVQQQQQRNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKL--GSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQKMGFPPNIVE--SAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYR 284
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCB1_MACFA (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Macaca fascicularis GN=SUCLA2 PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.936e-49 Identity = 105/245 (42.86%), Postives = 156/245 (63.67%), Query Frame = 1 Query: 136 QWQQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 Q QQQQ R L++HEY EL+ + G+++PKG S DE + + K++V+K+Q+LAGGRG GTF+SGLKGGV IV EE + ++ +M+G+ L TKQTG +G+I ++V +CE+ E YFAI ++R GP++IG S+GG +IED+A + P I+ PID+ GI E A ++ G P + + A E + KLY LF + D T++EINP+ E S ++ DAK+ F +A+R Sbjct: 44 QVQQQQQRNLSLHEYMSMELLQEAGVSIPKGCVAKSPDEAYAVAKKL--GSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIITEPIDIEEGIKKEQALQLAQKMGFPPNIVE--SAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYR 284
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCB_NEUCR (Probable succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Neurospora crassa GN=B9J10.140 PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 6.446e-49 Identity = 104/240 (43.33%), Postives = 152/240 (63.33%), Query Frame = 1 Query: 145 QQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 QQQ R L+IHEY A+L+ +YGI VPKG + E + + + +++V+K+Q+LAGGRG GTF +GLKGGV ++ E + A +M+G L+TKQTG QG++ S VY+CE+ E Y A+++DR + GP+I+ S+GG IE +A++ P I ID+ G+TDE A + L +A + ++KLYK+FCE D T +EINPL+ETS +++A DAK F A FR Sbjct: 31 QQQRRALSIHEYLSADLLRQYGIGVPKGDVARTGAEAEAIAKQI--GGEDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAKMFAEQMIGHKLITKQTGAQGRLCSAVYICERKFARREFYLAVLMDRASQGPVIVSSSQGGMDIEGVAKENPEAIHTTYIDINVGVTDEMARDIATKLGFSEQCVEEAKDTIQKLYKIFCEKDATQIEINPLSETSDHKVMAMDAKFGFDDNADFR 268
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCB1_BOVIN (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Bos taurus GN=SUCLA2 PE=2 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 9.308e-48 Identity = 103/243 (42.39%), Postives = 153/243 (62.96%), Query Frame = 1 Query: 136 QWQQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 Q Q QQ R L++HEY EL+ + G+++PKG S DE + + K++V+K+Q+LAGGRG GTF+SGLKGGV IV EE + ++ +M+G+ L TKQTG +G+I ++V +CE+ E YFAI ++R GP++IG S GG +IED+A + P IVK PID+ GI E A ++ + + + A E + KLY F + D T++EINP+ E S ++ DAK+ F +A+R Sbjct: 44 QIQHQQQRNLSLHEYLSMELLQEAGVSIPKGHVAKSPDEAYAIAKKL--GSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERRYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIVKEPIDIVEGIKKEQAVRLAQKMGFPASIVDSAAENMIKLYDPFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYR 284
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCB2_DICDI (Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Dictyostelium discoideum GN=scsB PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.708e-47 Identity = 106/239 (44.35%), Postives = 148/239 (61.92%), Query Frame = 1 Query: 151 QLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTF-KSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 Q+R LN+HEYQ LM KYG+N K V + KA ++ + ELVVK+Q+ AGGRG G+F ++G KGGVH+ K +E E L +MLG+ LVTKQT +G V V L E + E+YFAI++DRK GP++I +GG IE +AE+ P++I K PID+ GI E + + L A +Q++ LY+LF +SD T +EINP AET+ Q++ DAK+ F A+FR Sbjct: 23 QVRYLNLHEYQSKSLMDKYGVNTQKWRVVTKASDAIKAASEL---NGELVVKAQVHAGGRGKGSFIETGFKGGVHLCKTGKEAERLCDEMLGKHLVTKQTTKEGTKVQSVMLAESVDPKRELYFAIVMDRKYGGPVMIASPQGGVDIESVAEETPDLIFKEPIDIVKGIRPEQTKNLAEKLGFTGEKAKIAQQQMENLYQLFIKSDATQVEINPFAETTDGQVICMDAKINFDDNASFR 258 The following BLAST results are available for this feature:
BLAST of CN184992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184992 ID=CN184992; Name=CN184992; organism=Citrus sinensis; type=EST; length=861bpback to top |