CN184984

Overview
NameCN184984
Unique NameCN184984
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length283
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13070 contig Csv1_Contig13070:304..534. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184984 vs. ExPASy Swiss-Prot
Match: GAST1_SOLLC (Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.033e-12
Identity = 28/32 (87.50%), Postives = 29/32 (90.62%), Query Frame = -1
Query:  188 KCLCEPAGTNRNKQTCPCYNNWKTKRGGPKCP 283
            KCLC PAGT  NKQ+CPCYNNWKTKRGGPKCP
Sbjct:   81 KCLCVPAGTYGNKQSCPCYNNWKTKRGGPKCP 112          
The following BLAST results are available for this feature:
BLAST of CN184984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
GAST1_SOLLC1.033e-1287.50Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0006I02_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006I02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184984 ID=CN184984; Name=CN184984; organism=Citrus sinensis; type=EST; length=283bp
TTTTTTTTTTGATATTAGACCAGATTTATATTCTATAATTGATTGAAAAA
TGCATTACTTGTGCTTGCTATATATACGAGCACAAGAAAGATTGGCTACA
ATAGCAAAATAAGCATTATAGGAAATATATAACTGATTAGTGTCGATAGA
GAATTTTTTATTACTATAAACTGATACTATTAATTCAAGGGCATTTTGGT
CCTCCTCTCTTTGTCTTCCAGTTGTTGTAGCAAGGGCACGTTTGCTTGTT
CCTATTTGTGCCTGCCGGCTCACATAAGCACTT
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