CN184970

Overview
NameCN184970
Unique NameCN184970
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length350
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12915 contig Csv1_Contig12915:910..1257. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN184970 vs. ExPASy Swiss-Prot
Match: PUP1_ARATH (Purine permease 1 OS=Arabidopsis thaliana GN=PUP1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.208e-18
Identity = 42/60 (70.00%), Postives = 50/60 (83.33%), Query Frame = -3 
Query:  121 VLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNNKKMKKREQLPETEMPI 300
            VLLPVTE+ AV+ ++EKFQAEKGVSL LSLWGF SYFYGE K+ KK+  + Q PETE+PI
Sbjct:  289 VLLPVTEVFAVVCFREKFQAEKGVSLLLSLWGFVSYFYGEFKSGKKVVDKPQPPETELPI 348
[Close]
BLAST of CN184970 vs. ExPASy Swiss-Prot
Match: PUP3_ARATH (Purine permease 3 OS=Arabidopsis thaliana GN=PUP3 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.212e-16
Identity = 42/59 (71.19%), Postives = 51/59 (86.44%), Query Frame = -3 
Query:  130 VLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKN--NKKMKKREQLPETE 300
            VLLP+TE+LAVIFY EKFQAEKG+SLALSLWGF SYFYGEIK+  +K+  ++E+  ETE
Sbjct:  282 VLLPITEVLAVIFYHEKFQAEKGLSLALSLWGFVSYFYGEIKSGEDKRRIQQEESQETE 340
[Close]
BLAST of CN184970 vs. ExPASy Swiss-Prot
Match: PUP2_ARATH (Purine permease 2 OS=Arabidopsis thaliana GN=PUP2 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.223e-13
Identity = 37/60 (61.67%), Postives = 47/60 (78.33%), Query Frame = -3 
Query:  130 LLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNNKKMKKRE----QLPETE 297
            LLPVT ILAVI ++EKFQA KGV+LALSLWG  SYFYG++K+ +K K ++    QLP T+
Sbjct:  296 LLPVTVILAVICFQEKFQAGKGVALALSLWGSVSYFYGQVKSEEKTKAQDTQLSQLPVTD 355
The following BLAST results are available for this feature:
BLAST of CN184970 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
PUP1_ARATH2.208e-1870.00Purine permease 1 OS=Arabidopsis thaliana GN=PUP1 ... [more]
PUP3_ARATH1.212e-1671.19Purine permease 3 OS=Arabidopsis thaliana GN=PUP3 ... [more]
PUP2_ARATH6.223e-1361.67Purine permease 2 OS=Arabidopsis thaliana GN=PUP2 ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0006H14_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006H14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184970 ID=CN184970; Name=CN184970; organism=Citrus sinensis; type=EST; length=350bp
CTTGAACAAGTCGAGATTGAAATATAGTAATCATAAATAATTCATATCGA
AATAAAACTTACTATGGTAGCTAGCCAATTAACGGCATTCCAATGGTTAA
ACTAGTTATCATGGATTAGGAATTGGCATTTCTGTTTCTGGAAGTTGCTC
CCGCTTCTTCATCTTCTTATTGTTTTTAATCTCACCATAGAAATACGAAG
CAAATCCCCAAAGCGAAAGTGCAAGAGAGACTCCCTTTTCAGCTTGAAAT
TTTTCTTTGTAGAAAATGACTGCTAGAATCTCGGTAACTGGTAGCAGAAC
TTGCGATTTATGATTGCGGAGAGCAAAGACGAGCCACAGTAAATTGACTC
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