CN184969

Overview
NameCN184969
Unique NameCN184969
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length739
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184969 vs. ExPASy Swiss-Prot
Match: A115_TOBAC (Auxin-induced protein PCNT115 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.044e-54
Identity = 104/155 (67.10%), Postives = 126/155 (81.29%), Query Frame = -2
Query:  274 TMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFF-AGKAVVESLPSESILAMHPRFSGENLEKNKLLYTRLETLAAKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNI 735
            T+GELKKLVEEGK+KYIGLSEASA TIRRAHAVHPITAVQ+E+SLW+R++E++IIP CRELGIGIVAYSPLGRGF  +G  ++E + +E      PRF  ENLE NK LY R+  +A + GCT  QLALAW+ HQG+D+ PIPGTTKI NL+ N+
Sbjct:  147 TVGELKKLVEEGKLKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEEEIIPTCRELGIGIVAYSPLGRGFLSSGPKLLEDMSNEDYRKYLPRFQAENLENNKNLYERICEMAVRKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNM 301          
BLAST of CN184969 vs. ExPASy Swiss-Prot
Match: IN22_MAIZE (IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.049e-38
Identity = 80/113 (70.80%), Postives = 94/113 (83.19%), Query Frame = -2
Query:  400 TMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFF-AGKAVVESLPSESILAMHPRFSGENLEKNKLLYTRL 735
            T+GELKKLVEEGKIKYIGLSEASA TIRRAHAVHPITAVQ+E+SLW+R+ E+DIIP CRELGIGIVAYSPLGRGFF +G  +V+SL  +      PRF  ENL+KN  ++ R+
Sbjct:  142 TIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDAEEDIIPTCRELGIGIVAYSPLGRGFFSSGAKLVDSLSEQDFRKHMPRFQPENLDKNAQIFERV 254          
BLAST of CN184969 vs. ExPASy Swiss-Prot
Match: YAKC_SCHPO (Aldo-keto reductase yakc [NADP+] OS=Schizosaccharomyces pombe GN=yakc PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.851e-35
Identity = 82/160 (51.25%), Postives = 104/160 (65.00%), Query Frame = -2
Query:  265 MGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQMEYSLWTREIED---DIIPLCRELGIGIVAYSPLGRGFFAGK-AVVESLPSESILAMHPRFSGENLEKNKLLYTRLETLAAKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSL 732
            MG LKK VE GKI+YIGLSE SA+TIRRA AV+P++AVQ+EYS ++ EIE     ++  CRE  I IV Y+PLGRGF  G     +  P        PR+  EN  KN  L T++E +A     T  QL+LAWLL QGDDI+PIPGT ++  L+ N G+L
Sbjct:  138 MGALKKCVEAGKIRYIGLSECSANTIRRAAAVYPVSAVQVEYSPFSLEIERPEIGVMKACRENNITIVCYAPLGRGFLTGAYKSPDDFPEGDFRRKAPRYQKENFYKNLELVTKIEKIATANNITPGQLSLAWLLAQGDDILPIPGTKRVKYLEENFGAL 297          
BLAST of CN184969 vs. ExPASy Swiss-Prot
Match: PLR1_SCHPO (Pyridoxal reductase OS=Schizosaccharomyces pombe GN=plr1 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.165e-27
Identity = 71/164 (43.29%), Postives = 103/164 (62.80%), Query Frame = -2
Query:  265 TMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQMEYSLWTREIE-DDIIPLCRELGIGIVAYSPLGRGFFAGK-AVVESL----PSESILAMHPRFSGENLEKNKLLYTRLETLAAKYGCTTPQLALAWLLHQGDD-IVPIPGTTKITNLDNNIGSL 735
            TM  LK  V+ GKI  +GLSE SA+TI+RAHAV PI AV++EYSL++R+IE + I+ +CR+L I I+AYSP  RG   G+   VE L     S   L    RFS +   KN      +E LA K+G T P+ +L +++  G+  ++PIPG+T ++   +N+ +L
Sbjct:  134 TMKTLKGFVDSGKISCVGLSEVSAETIKRAHAVVPIAAVEVEYSLFSRDIETNGIMDICRKLSIPIIAYSPFCRGLLTGRIKTVEDLKEFAKSFPFLEYLDRFSPDVFAKNLPFLQAVEQLAKKFGMTMPEFSLLFIMASGNGLVIPIPGSTSVSRTKSNLNAL 297          
BLAST of CN184969 vs. ExPASy Swiss-Prot
Match: PLR2_SCHPO (Probable pyridoxal reductase 2 OS=Schizosaccharomyces pombe GN=SPCC1281.04 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.376e-22
Identity = 61/164 (37.20%), Postives = 99/164 (60.37%), Query Frame = -2
Query:  265 TMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQMEYSLWTREIE-DDIIPLCRELGIGIVAYSPLGRGFFAGKA-----VVESLPSESILAMHPRFSGENLEKNKLLYTRLETLAAKYGCTTPQLALAWLLHQGDD-IVPIPGTTKITNLDNNIGSL 735
            TM  LK  V+ G+I  +GLSEASA++I+RA A+ PI AV+ EYSL++R+IE + I+  C +L I I+AY+P   G   G+      + + + +   L    +F+ +  EKN      +E LA K+G + P+ AL +++  G   I+PIPG+T +   ++N+ +L
Sbjct:  134 TMKALKAFVDSGEISCVGLSEASAESIKRALAIVPIAAVETEYSLFSRDIEKNGILDTCTQLSIPIIAYAPFCHGLLTGRVKTAEDLKDFIKAFPFLRNMDKFNPKVFEKNIPFLKAVEQLAQKFGMSMPEFALNFIIANGKGMIIPIPGSTTVQRAESNLSAL 297          
BLAST of CN184969 vs. ExPASy Swiss-Prot
Match: YDJG_ECOLI (Uncharacterized oxidoreductase ydjG OS=Escherichia coli (strain K12) GN=ydjG PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.143e-19
Identity = 55/158 (34.81%), Postives = 84/158 (53.16%), Query Frame = -2
Query:  265 DTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGENLEKNKLLYTRLETLAAKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSL 738
            +T+  L +L  EGKI+ IG +   AD IR       +  +Q +YS+  R +E++++PLCR+ GI +  YSPL +G   G    + +P     A    F  EN+ K   +  + + L A+Y CT P LALAW+L Q D I  + G T    +  N+ +L
Sbjct:  149 ETVAVLNELKSEGKIRAIGAANVDADHIREYLQYGELDIIQAKYSILDRAMENELLPLCRDNGIVVQVYSPLEQGLLTGTITRDYVPG-GARANKVWFQRENMLKVIDMLEQWQPLCARYQCTIPTLALAWILKQSDLISILSGATAPEQVRENVAAL 305          
BLAST of CN184969 vs. ExPASy Swiss-Prot
Match: YEZB_SCHPO (Uncharacterized oxidoreductase C3A11.11c OS=Schizosaccharomyces pombe GN=SPAC3A11.11c PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.640e-17
Identity = 58/165 (35.15%), Postives = 90/165 (54.55%), Query Frame = -2
Query:  262 DTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQMEYSLWTREIE-DDIIPLCRELGIGIVAYSPLGRGFFAGK----AVVESLPSESILAMHPRFSGENLEKNKLLYTRLETLAAKYGCTTPQLALAWLLHQG-DDIVPIPGTTKITNLDNNIGSLA 738
            +TM  LK+ V+ G I+ IGL E S + I+RAH+V  I A+++ YS+  REIE + +  LC +L I +VA+SPL  G   G+    A +E+L         P  S             L+ LA+KY  +  +LAL+++L  G   I+PIP  T    ++ ++GS +
Sbjct:  133 ETMACLKEFVDSGDIRCIGLCEPSVEEIKRAHSVVRIAAIEVHYSMLFREIEYNGVKKLCHDLSIPLVAHSPLAHGLLTGRVTTMADIENLKKHHQCNEQPPSS--TFSSTLPCIQALKELASKYDMSLAELALSFILSAGRGRILPIPSATSYDLIEASLGSFS 295          
BLAST of CN184969 vs. ExPASy Swiss-Prot
Match: YCCK_BACSU (Uncharacterized oxidoreductase yccK OS=Bacillus subtilis GN=yccK PE=3 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.630e-15
Identity = 50/158 (31.65%), Postives = 78/158 (49.37%), Query Frame = -2
Query:  265 DTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGENLEKNKLLYTRLETLAAKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSL 738
            +  G LK+L +EGKIK IG S      ++  +A   +   Q EYSL  R+ E +++P C + GI  + Y PL  G   GK   +++  +      P+F GE    N     +L+ +A +    T  +ALAWLL +      IPG  +   L +N+ +L
Sbjct:  137 EVAGTLKELKDEGKIKAIGASNLDYQQLQDFNADGYLEVFQAEYSLIQRDAEKELLPYCEKQGISFIPYFPLASGLLTGKFTQDTV-FDDFRKDKPQFQGETFIHNLKKVDKLKAVAEEKQADTAHVALAWLLTRPAIDAIIPGAKRPEQLQDNLKTL 293          
BLAST of CN184969 vs. ExPASy Swiss-Prot
Match: YI7E_SCHPO (Putative aryl-alcohol dehydrogenase C977.14c OS=Schizosaccharomyces pombe GN=SPAC977.14c PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.353e-14
Identity = 52/166 (31.33%), Postives = 83/166 (50.00%), Query Frame = -2
Query:  265 DTMGELKKLVEEGKIKYIGLSEASA------DTIRRAHAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGK--AVVESLPSESILAMHPRFSGENLEKNKLLYTRLETLAAKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSL 738
            + M  L  +VE GK++YIG S                H  H   ++Q  ++L  RE E ++IP C++ G+G++ +SPL RG       A  E++ S++ L       G      K + +R+E LA KY  +   LA AW LH+GD   PI G +K+  L + + ++
Sbjct:  166 EVMRALNDVVESGKVRYIGASTMRCYQFIELQNTAEKHGWHKFISMQNYHNLLYREEEREMIPYCQKTGVGLIPWSPLARGLLTRSIDANEETIRSKTDLYTRALEFGAGY---KAILSRVEELAKKYNVSMATLATAWSLHKGD--YPIVGISKVERLKDALAAV 326          
BLAST of CN184969 vs. ExPASy Swiss-Prot
Match: IOLS_BACSU (Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.168e-13
Identity = 45/156 (28.85%), Postives = 75/156 (48.08%), Query Frame = -2
Query:  274 DTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVE-SLPSESILAMHPRFSGENLEKNKLLYTRLETLAAKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNI 738
            + +  L ++ + GKI+ IG+S  S + ++ A+    +  +Q EY+L  RE E    P  +E  I  + Y PL  G  AGK   + + P   +      F GE  ++N     +L  +A K+    P + LAW L + +  + IPG  +   L +NI
Sbjct:  135 EAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDLRNEQEHFKGERFKENIRKVNKLAPIAEKHNVDIPHIVLAWYLARPEIDILIPGAKRADQLIDNI 290          
The following BLAST results are available for this feature:
BLAST of CN184969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
A115_TOBAC1.044e-5467.10Auxin-induced protein PCNT115 OS=Nicotiana tabacum... [more]
IN22_MAIZE1.049e-3870.80IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1[more]
YAKC_SCHPO1.851e-3551.25Aldo-keto reductase yakc [NADP+] OS=Schizosaccharo... [more]
PLR1_SCHPO3.165e-2743.29Pyridoxal reductase OS=Schizosaccharomyces pombe G... [more]
PLR2_SCHPO1.376e-2237.20Probable pyridoxal reductase 2 OS=Schizosaccharomy... [more]
YDJG_ECOLI4.143e-1934.81Uncharacterized oxidoreductase ydjG OS=Escherichia... [more]
YEZB_SCHPO8.640e-1735.15Uncharacterized oxidoreductase C3A11.11c OS=Schizo... [more]
YCCK_BACSU3.630e-1531.65Uncharacterized oxidoreductase yccK OS=Bacillus su... [more]
YI7E_SCHPO2.353e-1431.33Putative aryl-alcohol dehydrogenase C977.14c OS=Sc... [more]
IOLS_BACSU1.168e-1328.85Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0006H13_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006H13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184969 ID=CN184969; Name=CN184969; organism=Citrus sinensis; type=EST; length=739bp
GTAATGTACGAATCAAGCATTTACACGAATATTTCTTGCTTAATTCTCAA
TAAACTACACATAAGAAGGAAGCAAGAGATGAAATGACATGCCTCCATAG
TTCCACACCTCAGTTTAATCCACTTGGAATATTTACTTTCTAGGAGTATT
TGCAAATTTGTACCCATAACCAGACAAATTACTGTAGTCTCTATGGCCAC
CAACTTCGTCAACAGGAATGGTCTTGCAAATTTCTTTCAAGTCCTCTTCT
TTAAGCTTCAGCGCCAAAGAACCAATGTTGTTATCAAGGTTTGTAATCTT
AGTTGTCCCGGGAATAGGGACTATGTCATCCCCTTGATGGAGAAGCCACG
CCAAAGCTAATTGAGGGGTAGTACACCCATACTTTGCAGCCAAGGTTTCC
AAACGCGTATATAAAAGTTTGTTCTTCTCCAAGTTCTCTCCACTGAACCT
AGGATGCATTGCCAAAATACTCTCACTGGGCAAGCTTTCCACAACTGCCT
TCCCAGCAAAGAAACCTCGACCAAGAGGGCTATATGCCACTATGCCAATA
CCGAGCTCTCTGCAGAGAGGAATTATATCATCTTCGATTTCACGAGTCCA
CAGCGAGTATTCCATTTGTACAGCTGTTATGGGATGGACAGCATGGGCTC
TTCTTATTGTGTCTGCACTGGCTTCAGACAACCCAATATATTTTATCTTT
CCCTCCTCTACTAGCTTCTTGAGTTCCCCCATCGTATCC
back to top