CN184963
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184963 vs. ExPASy Swiss-Prot
Match: UBC26_ARATH (Probable ubiquitin carrier protein E2 26 OS=Arabidopsis thaliana GN=UBC26 PE=2 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 7.282e-39 Identity = 76/157 (48.41%), Postives = 111/157 (70.70%), Query Frame = -2 Query: 320 KICLSLLGTWTGKSTEMWDKNKSTMLQVLVSIQALILNAKPFFNEPGFEKSYVGPEGEKMSRSYNDDAFIYSLKTMMYTLRKPPKHFEDLVAMHFRNHAHDILVACKAYMDGAVVGHVNIKNGNPEVDQVKWSSSKEFKDKLGQMMKILVNNFTRNG 790 K+CLSLLGTW G + E W N+STMLQ+LVSIQALILN KP+FNEPG+ +S GE S+ Y+++ F+ SLKTM+Y++R+PP+HFE+ V H+ +HDI+ AC AY GA +G + +K G ++++ + S SK+FK + M+ +V+ F + G Sbjct: 355 KVCLSLLGTWAGSAREKWLPNESTMLQLLVSIQALILNEKPYFNEPGYVQSAGTASGESKSKVYSENVFLLSLKTMVYSIRRPPQHFEEYVQNHYFVRSHDIVKACNAYKAGAPLGSM-VKGGVQDLEEARQSGSKKFKTDVASFMQTVVDEFVKLG 510
BLAST of CN184963 vs. ExPASy Swiss-Prot
Match: UBC25_ARATH (Probable ubiquitin carrier protein E2 25 OS=Arabidopsis thaliana GN=UBC25 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 5.185e-38 Identity = 81/164 (49.39%), Postives = 110/164 (67.07%), Query Frame = -2 Query: 305 KICLSLLGTWTGKSTEMWDKNKSTMLQVLVSIQALILNAKPFFNEPGFEKSYVGPEGEKMSRSYNDDAFIYSLKTMMYTLRKPPKHFEDLVAMHFRNHAHDILVACKAYMDGAVVGHVNIKNGNPEVDQ-VKWSSSKEFKDKLGQMMK-ILVNNFTRNGSTGCE 790 K+CLSLLGTW+G E W N STMLQVLVSIQ LILN KP+FNEPG+E+S GE S++Y+++ FI SLKTM+YT+R+PPK+FED HF + AHD+L AC AY +GA G+ + G P+V++ SS +F+ + ++ +L+ F G G E Sbjct: 416 KVCLSLLGTWSGNQREKWIPNTSTMLQVLVSIQGLILNQKPYFNEPGYERSAGSAHGESTSKAYSENTFILSLKTMVYTMRRPPKYFEDFAYGHFFSCAHDVLKACNAYRNGATPGY--LVKGAPDVEENSAGMSSLKFRTDVATFVETVLLKEFILLGVLGLE 577 HSP 2 Score: 21.9422 bits (45), Expect = 5.185e-38 Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = -3 Query: 787 LNPNLYDCEK 816 +NPNLY+C K Sbjct: 407 INPNLYNCGK 416
BLAST of CN184963 vs. ExPASy Swiss-Prot
Match: UBC23_ARATH (Probable ubiquitin carrier protein E2 23 OS=Arabidopsis thaliana GN=UBC23 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 7.054e-34 Identity = 73/164 (44.51%), Postives = 103/164 (62.80%), Query Frame = -2 Query: 299 KICLSLLGTWTGKSTEMWDKNKSTMLQVLVSIQALILNAKPFFNEPGFEKSYVGPEGEKMSRSYNDDAFIYSLKTMMYTLRKPPKHFEDLVAMHFRNHAHDILVACKAYMDGAVVGHVNIKNGNPEVDQVKWSSSKEFKDKLGQMMKILVNNFTRNGSTGCEQF 790 K+CLSLL TWTG+ E+WD S++LQVLVS+Q L+LN+KP+FNE G++K EGEK S YN++ F+ + KTMMY +RKPPK FE+L+ HFR + IL AC AYM G ++G + + S+S FK L ++ L + + G+ C +F Sbjct: 934 KVCLSLLNTWTGRGNEVWDPKSSSILQVLVSLQGLVLNSKPYFNEAGYDKQVGTAEGEKNSLGYNENTFLLNCKTMMYLMRKPPKDFEELIKDHFRKRGYYILKACDAYMKGYLIGSLTKDASVIDERSSANSTSVGFKLMLAKIAPKLFSALSEVGA-DCNEF 1096
BLAST of CN184963 vs. ExPASy Swiss-Prot
Match: UBC24_ARATH (Probable ubiquitin-conjugating enzyme E2 24 OS=Arabidopsis thaliana GN=UBC24 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.203e-33 Identity = 74/168 (44.05%), Postives = 105/168 (62.50%), Query Frame = -2 Query: 287 KICLSLLGTWTGKSTEMWDKNKSTMLQVLVSIQALILNAKPFFNEPGFEKSYVGPEGEKMSRSYNDDAFIYSLKTMMYTLRKPPKHFEDLVAMHFRNHAHDILVACKAYMDGAVVGHVNIKNGNPEVDQVKWSSSKEFKDKLGQMMKILVNNFTRNGSTGCEQFLPST 790 ++CLSLL TW+G TE+W+ S++LQ+L+S QAL+LN KP+FNE G++K EGEK S SYN++AF+ + K+M+ LRKPPKHFE LV HF + A +L ACKAYM+G VG GN ++S FK L ++ L+ F+ G ++ P + Sbjct: 746 RVCLSLLNTWSGSGTEVWNAGSSSILQLLLSFQALVLNEKPYFNEAGYDKQLGRAEGEKNSVSYNENAFLITCKSMISMLRKPPKHFEMLVKDHFTHRAQHVLAACKAYMEGVPVGSSANLQGN------STTNSTGFKIMLSKLYPKLLEAFSEIGVDCVQEIGPES 907
BLAST of CN184963 vs. ExPASy Swiss-Prot
Match: UBE2O_MOUSE (Ubiquitin-conjugating enzyme E2 O OS=Mus musculus GN=Ube2o PE=1 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.428e-18 Identity = 46/95 (48.42%), Postives = 65/95 (68.42%), Query Frame = -2 Query: 506 KICLSLLGTWTGKSTEMWDKNKSTMLQVLVSIQALILNAKPFFNEPGFEKSYVGPEGEKMSRSYNDDAFIYSLKTMMYTLRKPPKHFEDLVAMHF 790 K+C+SLLGTW GK TE W +KS++LQVL+SIQ LIL +P++NE GF+ EG + SR YN+ A I +++M +R+PP+ FE + HF Sbjct: 1035 KVCVSLLGTWIGKGTERWT-SKSSLLQVLISIQGLILVNEPYYNEAGFDSDRGLQEGYENSRCYNEMALIRVVQSMTQLVRRPPEVFEQEIRQHF 1128
BLAST of CN184963 vs. ExPASy Swiss-Prot
Match: UBE2O_HUMAN (Ubiquitin-conjugating enzyme E2 O OS=Homo sapiens GN=UBE2O PE=1 SV=3) HSP 1 Score: 93.5893 bits (231), Expect = 1.428e-18 Identity = 46/95 (48.42%), Postives = 65/95 (68.42%), Query Frame = -2 Query: 506 KICLSLLGTWTGKSTEMWDKNKSTMLQVLVSIQALILNAKPFFNEPGFEKSYVGPEGEKMSRSYNDDAFIYSLKTMMYTLRKPPKHFEDLVAMHF 790 K+C+SLLGTW GK TE W +KS++LQVL+SIQ LIL +P++NE GF+ EG + SR YN+ A I +++M +R+PP+ FE + HF Sbjct: 1038 KVCVSLLGTWIGKGTERWT-SKSSLLQVLISIQGLILVNEPYYNEAGFDSDRGLQEGYENSRCYNEMALIRVVQSMTQLVRRPPEVFEQEIRQHF 1131
BLAST of CN184963 vs. ExPASy Swiss-Prot
Match: UBC3_MIMIV (Probable ubiquitin-conjugating enzyme E2 R521 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R521 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.865e-18 Identity = 45/114 (39.47%), Postives = 70/114 (61.40%), Query Frame = -2 Query: 452 KICLSLLGTWTGKSTEMWDKNKSTMLQVLVSIQALILNAKPFFNEPGFEKSYVGPEGEKMSRSYNDDAFIYSLK-TMMYTLRKPPKHFEDLVAMHFRNHAHDILVACKAYMDGA 790 K+CLS+LGTW G++ E W S+MLQV++SIQ+L+L ++P+FNEPG+E S +G K+S YN +K M+ ++ P FE ++ HF A I C+ +++ A Sbjct: 1304 KVCLSILGTWRGQAGESWIPGVSSMLQVMISIQSLVLISEPYFNEPGYESSRGTDKGNKLSTEYNQKVRFNCMKWAMIDVIKNPVPGFESMIKKHFSIKAPHIKQVCQTWINEA 1417
BLAST of CN184963 vs. ExPASy Swiss-Prot
Match: BIRC6_HUMAN (Baculoviral IAP repeat-containing protein 6 OS=Homo sapiens GN=BIRC6 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.426e-18 Identity = 44/111 (39.64%), Postives = 71/111 (63.96%), Query Frame = -2 Query: 461 KICLSLLGTWTGKSTEMWDKNKSTMLQVLVSIQALILNAKPFFNEPGFEKSYVGPEGEKMSRSYNDDAFIYSLK-TMMYTLRKPPKHFEDLVAMHFRNHAHDILVACKAYM 790 K+CLS+L TW G+ E W+ S+ LQVLVS+Q+LIL A+P+FNEPG+E+S P G + SR Y+ + ++K M+ +R P F++++ HF +I+ C+ ++ Sbjct: 4636 KVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNIRQATVKWAMLEQIRNPSPCFKEVIHKHFYLKRVEIMAQCEEWI 4746 The following BLAST results are available for this feature:
BLAST of CN184963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN184963 ID=CN184963; Name=CN184963; organism=Citrus sinensis; type=EST; length=818bpback to top |