CN184949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184949 vs. ExPASy Swiss-Prot
Match: RN217_XENLA (Probable E3 ubiquitin-protein ligase RNF217 OS=Xenopus laevis GN=rnf217 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.132e-19 Identity = 59/207 (28.50%), Postives = 93/207 (44.93%), Query Frame = 3 Query: 84 TCEIFIEPVAANKKFKNKNLCTHPFCQECIAKYIQVKVQDDNTAKIECPGLYCKHNLDTISCIPIIPASFFSKWCDVLCEDYVLGFERCYCPNSNC-----------KALVVNECETNGTLTKAQCPSCKQWFCFQCKLKWHAGYRCEESRNSRDRSDIMFCQLVE--RMNWARCPGCGHCVERVNGCSSVLC-RCKTRFCYRCGRK 662 +C + +E ++ K C P C EC+ +Y+ +VQ A+I+CP C +LD + + +P D++ Y L R C K + N ++ L K QCPSC+ +CF+C WH G C E + D+ + +E + N +CP C ++R GC + C +C T FCYRCG + Sbjct: 2 SCRVCLE----DRSIKPLPCCKKPVCDECLKRYLSSQVQLGQ-AEIQCPITECNKHLDESTILYSLPHD------DIIKYKYFLELSRMDSSTKPCPQCKHFTTFKRKTHIPNPTKSENKL-KIQCPSCQFIWCFRCHAPWHEGVNCREYKKG-DKLLRHWANEIEHGQRNAQKCPRCKVHIQRTEGCDHMTCSQCNTNFCYRCGER 195
BLAST of CN184949 vs. ExPASy Swiss-Prot
Match: R144A_XENTR (Probable E3 ubiquitin-protein ligase RNF144A OS=Xenopus tropicalis GN=rnf144a PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.125e-15 Identity = 49/177 (27.68%), Postives = 82/177 (46.33%), Query Frame = 3 Query: 144 CTHPFCQECIAKYIQVKVQDDNTAKIECPGLYC--KHNLDTISCIPIIPASFFSKWCDVLCE-DYVLGFERCYCPNSNCKALVVNECETNGTLTKAQCPSCKQWFCFQCKLKWHAGYRCEESRNSR---DRSDIMFCQLVERMNWARCPGCGHCVERVNGCSSVLCR-CKTRFCYRC 653 C FC C+ +Y+++ +++ I CP C + +L ++ A K+ + E + +L R +CP+S+C+A+ + + QC +C FC CK WH G C E+ S F L + + RCP C +ER GC+ ++C+ CK FC+ C Sbjct: 38 CQCIFCTLCLKQYVELLIKEGLETAISCPDASCPKRGHLQENEIECMVAAEIMQKYKKLQFEKEILLDPCRTWCPSSSCQAVCKLQEKGIQNPQLVQCSACDIEFCSACKANWHPGQGCPENMAITFLPGDSSSFFKSLEDDVPIKRCPKCKVYIERDEGCAQMMCKNCKHAFCWYC 214
BLAST of CN184949 vs. ExPASy Swiss-Prot
Match: R144A_HUMAN (Probable E3 ubiquitin-protein ligase RNF144A OS=Homo sapiens GN=RNF144A PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.365e-14 Identity = 50/180 (27.78%), Postives = 80/180 (44.44%), Query Frame = 3 Query: 144 CTHPFCQECIAKYIQVKVQDDNTAKIECPGLYCKHN----LDTISCIPIIPASFFSKWCDVLCEDYVLGFERC--YCPNSNCKALVVNECETNGTLTKAQCPSCKQWFCFQCKLKWHAGYRCEESRNSR---DRSDIMFCQLVERMNWARCPGCGHCVERVNGCSSVLCR-CKTRFCYRC 653 C FC C+ +Y+++ +++ I CP C + I C+ + A ++ + E VL F+ C +CP S C+A+ + T QC +C+ FC CK WH G C E+ + F + RCP C +ER GC+ ++C+ CK FC+ C Sbjct: 38 CQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQENEIECM--VAAEIMQRYKKLQFEREVL-FDPCRTWCPASTCQAVCQLQDVGLQTPQPVQCKACRMEFCSTCKASWHPGQGCPETMPITFLPGETSAAFKMEEDDAPIKRCPKCKVYIERDEGCAQMMCKNCKHAFCWYC 214
BLAST of CN184949 vs. ExPASy Swiss-Prot
Match: R144B_MOUSE (E3 ubiquitin-protein ligase RNF144B OS=Mus musculus GN=Rnf144b PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 6.772e-14 Identity = 46/178 (25.84%), Postives = 82/178 (46.07%), Query Frame = 3 Query: 144 CTHPFCQECIAKYIQVKVQDDNTAKIECPGLYCKHN--LDTISCIPIIPASFFSKWCDVLCEDYV-LGFERCYCPNSNCKALVVNECETNGTLTKAQCPSCKQWFCFQCKLKWHAGYRCEESRNSRDRSDIMFCQLVERMNWARCPGCGHCVERVNGCSSVLCR-CKTRFCYRCGRKL 665 C FC C+ +Y+ + +++ + I CP + C ++ L ++P F + + E V + R +CP ++C+ + G +CPSC FC CK WH C +S+++ +F + +CP C +ER GC+ ++C+ CK FC+ C + L Sbjct: 48 CQCIFCTPCLKQYMVLSIREGCGSPITCPDMVCLNHGTLQETEIACLVPLDEFQLYQRLKFEREVHMDPLRTWCPVADCQTVCHISAGDPGQPVLVECPSCHLKFCSCCKDAWHEESSCRDSQSAMPEHGALFGTDAD-APIKQCPVCRIYIERNEGCAQMMCKNCKHTFCWYCLQNL 224
BLAST of CN184949 vs. ExPASy Swiss-Prot
Match: R144B_BOVIN (E3 ubiquitin-protein ligase RNF144B OS=Bos taurus GN=RNF144B PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.772e-14 Identity = 48/181 (26.52%), Postives = 83/181 (45.86%), Query Frame = 3 Query: 144 CTHPFCQECIAKYIQVKVQDDNTAKIECPGLYCKHN--LDTISCIPIIPASFFSKWCDVLCEDYV-LGFERCYCPNSNCKALVVNECETNGTLTKAQCPSCKQWFCFQCKLKWHAGYRCEESRNS---RDRSDIMFCQLVERMNWARCPGCGHCVERVNGCSSVLCR-CKTRFCYRCGRKL 665 C FC C+ +Y+Q+ +++ + I CP + C ++ L ++P F + + E V L R +CP ++C+ + G +CPSC FC CK WHA C +S+ + + + + +CP C +ER GC+ ++C+ CK FC+ C + L Sbjct: 49 CRCIFCTACLKQYMQLAIREGCGSPITCPDMVCLNHGTLQEAEIACLVPVDQFQLYQRLKFEREVHLDPCRTWCPVADCQTVCPVATSDPGQPVLVECPSCHLKFCSCCKDAWHAEVSCRDSQPGILPTEHGTLFGTETDAPIK--QCPVCRVYIERNEGCAQMMCKNCKHTFCWYCLQNL 227
BLAST of CN184949 vs. ExPASy Swiss-Prot
Match: R144B_HUMAN (E3 ubiquitin-protein ligase RNF144B OS=Homo sapiens GN=RNF144B PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.845e-14 Identity = 50/180 (27.78%), Postives = 82/180 (45.56%), Query Frame = 3 Query: 144 CTHPFCQECIAKYIQVKVQDDNTAKIECPGLYCKHN--LDTISCIPIIPASFFSKWCDVLCEDYV-LGFERCYCPNSNCKALVVNECETNGTLTKAQCPSCKQWFCFQCKLKWHAGYRCEESRN--SRDRSDIMFCQLVERMNWARCPGCGHCVERVNGCSSVLCR-CKTRFCYRCGRKL 665 C FC C+ +Y+Q+ +++ + I CP + C ++ L ++P F + + E V L R +CP ++C+ + G +CPSC FC CK WHA C +S+ +F E +CP C +ER GC+ ++C+ CK FC+ C + L Sbjct: 48 CQCIFCTACLKQYMQLAIREGCGSPITCPDMVCLNHGTLQEAEIACLVPVDQFQLYQRLKFEREVHLDPYRTWCPVADCQTVCPVASSDPGQPVLVECPSCHLKFCSCCKDAWHAEVSCRDSQPIVLPTEHRALFGTDAE-APIKQCPVCRVYIERNEGCAQMMCKNCKHTFCWYCLQNL 226
BLAST of CN184949 vs. ExPASy Swiss-Prot
Match: R144A_MOUSE (Probable E3 ubiquitin-protein ligase RNF144A OS=Mus musculus GN=Rnf144a PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.155e-13 Identity = 50/180 (27.78%), Postives = 79/180 (43.89%), Query Frame = 3 Query: 144 CTHPFCQECIAKYIQVKVQDDNTAKIECPGLYCKHN----LDTISCIPIIPASFFSKWCDVLCEDYVLGFERC--YCPNSNCKALVVNECETNGTLTKAQCPSCKQWFCFQCKLKWHAGYRCEESRNSR---DRSDIMFCQLVERMNWARCPGCGHCVERVNGCSSVLCR-CKTRFCYRC 653 C FC C+ +Y+++ +++ I CP C + I C+ + A ++ + E VL F+ C +CP S C+A+ + T QC +C FC CK +WH G C E+ + F RCP C +ER GC+ ++C+ CK FC+ C Sbjct: 38 CQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQENEIECM--VAAEIMQRYKKLQFEREVL-FDPCRTWCPASTCQAVCQLQDIGLQTPQLVQCKACDMEFCSACKARWHPGQGCPETMPITFLPGETSSAFKMEEGDAPIKRCPKCRVYIERDEGCAQMMCKNCKHAFCWYC 214
BLAST of CN184949 vs. ExPASy Swiss-Prot
Match: ARI2_MOUSE (Protein ariadne-2 homolog OS=Mus musculus GN=Arih2 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.574e-13 Identity = 49/176 (27.84%), Postives = 76/176 (43.18%), Query Frame = 3 Query: 144 CTHPFCQECIAKYIQVKVQDDNTAKIECPGLYCKHNLDTISCIPIIP-ASFFSKWCDVLCEDYVLG-FERCYCPNSNCKALV-VNECETNGTLTKAQCPSCKQWFCFQCKLKWHAGYRCEESRN--SRDRSDIMFCQLVERMNWARCPGCGHCVERVNGCSSVLC-RCKTRFCYRC 653 C H FC+ C ++ V V+D I C C P++P K+ L DYV F+ CP ++C ++ V E + QC C + FCF+C+ +HA C R ++ D + + CP C C+E+ GC+ + C +CK FC+ C Sbjct: 155 CQHQFCRSCWEQHCSVLVKDGVGVGISCMAQDCPLRTPEDFVFPLLPNEELRDKYRRYLFRDYVESHFQLQLCPGADCPMVIRVQEPRAR----RVQCNRCSEVFCFKCRQMYHAPTDCATIRKWLTKCADDSETANYIS-AHTKDCPKCNICIEKNGGCNHMQCSKCKHDFCWMC 325
BLAST of CN184949 vs. ExPASy Swiss-Prot
Match: ARI2_HUMAN (Protein ariadne-2 homolog OS=Homo sapiens GN=ARIH2 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.488e-13 Identity = 47/176 (26.70%), Postives = 76/176 (43.18%), Query Frame = 3 Query: 144 CTHPFCQECIAKYIQVKVQDDNTAKIECPGLYCKHNLDTISCIPIIP-ASFFSKWCDVLCEDYVLG-FERCYCPNSNCKALV-VNECETNGTLTKAQCPSCKQWFCFQCKLKWHAGYRCEESRN--SRDRSDIMFCQLVERMNWARCPGCGHCVERVNGCSSVLC-RCKTRFCYRC 653 C H FC+ C ++ V V+D + C C P++P K+ L DYV ++ CP ++C ++ V E + QC C + FCF+C+ +HA C R ++ D + + CP C C+E+ GC+ + C +CK FC+ C Sbjct: 156 CQHQFCRSCWEQHCSVLVKDGVGVGVSCMAQDCPLRTPEDFVFPLLPNEELREKYRRYLFRDYVESHYQLQLCPGADCPMVIRVQEPRAR----RVQCNRCNEVFCFKCRQMYHAPTDCATIRKWLTKCADDSETANYIS-AHTKDCPKCNICIEKNGGCNHMQCSKCKHDFCWMC 326
BLAST of CN184949 vs. ExPASy Swiss-Prot
Match: ARI2_DROME (Protein ariadne-2 OS=Drosophila melanogaster GN=ari-2 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.277e-12 Identity = 48/191 (25.13%), Postives = 85/191 (44.50%), Query Frame = 3 Query: 105 PVAANKKFKNKNL---CTHPFCQECIAKYIQVKVQDDNTAKIECPGLYCKHNLDTISCIPIIPASFF-SKWCDVLCEDYVLGF-ERCYCPNSNCKALVVNECETNGTLTKAQCPSCKQWFCFQCKLKWHAGYRCEESRN--SRDRSDIMFCQLVERMNWARCPGCGHCVERVNGCSSVLC-RCKTRFCYRC 653 PV A+ + +K C H FC++C Y + ++ + +I C C + + ++ K+ +DYV E +CP NC+ ++V E + +A C +C FCF+C + +HA C+ + ++ D + + CP C C+E+ GC+ + C CK FC+ C Sbjct: 154 PVCASSQLGDKFYSLACGHSFCKDCWTIYFETQIFQGISTQIGCMAQMCNVRVPEDLVLTLVTRPVMRDKYQQFAFKDYVKSHPELRFCPGPNCQ-IIVQSSEISAK--RAICKACHTGFCFRCGMDYHAPTDCQVIKKWLTKCADDSETANYIS-AHTKDCPKCHICIEKNGGCNHMQCFNCKHDFCWMC 340 The following BLAST results are available for this feature:
BLAST of CN184949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184949 ID=CN184949; Name=CN184949; organism=Citrus sinensis; type=EST; length=868bpback to top |