DC887587

Overview
NameDC887587
Unique NameDC887587
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length435
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DC887587 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.899e-15
Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = -3 
Query:  299 LHCFKWDLPDGMKPSELDMSDVFGLTAPRASRLIAVPSKRLICPL 433
            LHCF W LPDGMKPSELDM+DVFGLTAP+A+RL AVP+ RLIC L
Sbjct:  476 LHCFTWKLPDGMKPSELDMNDVFGLTAPKATRLFAVPTTRLICAL 520
The following BLAST results are available for this feature:
BLAST of DC887587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
C84A1_ARATH1.899e-1580.00Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
back to top
Properties
Property NameValue
Genbank descriptionDC887587 EIC Citrus sinensis cDNA clone EIC0596 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887587 ID=DC887587; Name=DC887587; organism=Citrus sinensis; type=EST; length=435bp
TTACTGTAAAACATTATTATTTGAGTATCATTGAGAAAGTACAAAAAAGA
AAATTGAAAAAAGAAACAATAATAGATAATACAAGAAGACAAGCTCCACA
TAAATCAAATTGTAAGGGATTTGTAAAACCACAGTCATTGTCTTGGTCTC
TCTCCCGATATTTATTTGCCCTTTTTTCTTCCCCCAAAGATTTTAAAAAC
AAAAAGGGCGTGCAATAACAATTCAGCTGTCCCCTCCTATGTATTGTTAC
GTAAATAAAATCTTTCATGCAATTCAGCTCACTCTTGGTTTTGGTTCAAA
GAGGACAGATGAGGCGTTTACTGGGGACGGCAATGAGTCGACTCGCTCTC
GGCGCAGTGAGTCCAAACACATCACTCATGTCAAGCTCACTAGGTTTCAT
TCCATCAGGCAAATCCCACTTGAAACAGTGAAGCA
back to top