CN184937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184937 vs. ExPASy Swiss-Prot
Match: PNO1_NEMVE (RNA-binding protein pno1 OS=Nematostella vectensis GN=pno1 PE=3 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 1.600e-60 Identity = 109/176 (61.93%), Postives = 146/176 (82.95%), Query Frame = 3 Query: 198 KPLFGPLKAHEMSGGRVQFRKVNVTPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILGS 725 +P F P+KA +++GG+ + RK+ V HRY+PLK+ WM+I+TP+ E +K+ IR NL +R VE++ +T DI +QK ADFV AF+LGF+V DA+AL+RLD+L++ESFEI DVK L+G+HLSRAIGR++GKGGKTKF IEN TKTRIV+A++KIHILGSF NIKIAR ++C+LILGS Sbjct: 43 RPSFPPVKAQKLAGGKSETRKIPVPSHRYTPLKENWMKIFTPVVEHLKLQIRFNLGSRHVEIRASKETSDIGAVQKAADFVQAFILGFEVEDALALIRLDDLFLESFEIADVKPLKGDHLSRAIGRVAGKGGKTKFTIENVTKTRIVLAETKIHILGSFQNIKIARTAICNLILGS 218
BLAST of CN184937 vs. ExPASy Swiss-Prot
Match: PNO1_DROME (RNA-binding protein pno1 OS=Drosophila melanogaster GN=l(1)G0004 PE=1 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 6.079e-60 Identity = 110/161 (68.32%), Postives = 140/161 (86.96%), Query Frame = 3 Query: 243 RVQFRKVNVTPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILGS 725 R + RKV+V PHRYS LK+ WM+I+TP+ E MK+ IR N+KAR+VEL+ +TPDI+NLQ+ ADFV AF+ GF+V DA+ALLRL++L++ESFEIKDVKTLRG+H SRAIGRL+GKGG+TKF IEN TKTRIV+ADSKIHILGS+ NI++AR ++C+LILGS Sbjct: 60 RSELRKVSVPPHRYSSLKEHWMKIFTPVVEHMKLQIRFNMKARQVELRVGPETPDIANLQRGADFVRAFLCGFEVDDALALLRLEDLFVESFEIKDVKTLRGDHQSRAIGRLAGKGGRTKFTIENVTKTRIVLADSKIHILGSYQNIQLARRAVCNLILGS 220
BLAST of CN184937 vs. ExPASy Swiss-Prot
Match: PNO1_DROPS (RNA-binding protein pno1 OS=Drosophila pseudoobscura pseudoobscura GN=l(1)G0004 PE=3 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.354e-59 Identity = 109/159 (68.55%), Postives = 139/159 (87.42%), Query Frame = 3 Query: 249 QFRKVNVTPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILGS 725 + RKV+V PHRYS LK+ WM+I+TP+ E MK+ IR N+KAR+VEL+ +TPDI+NLQK ADFV AF+ GF+V DA+ALLRL++L++E+FEIKDVKTLRG+H SRAIGRL+GKGG+TKF IEN TKTRIV+ADSKIHILGS+ NI++AR ++C+LILGS Sbjct: 60 ELRKVSVPPHRYSSLKEHWMKIFTPVVEHMKLQIRFNMKARQVELRVGPETPDIANLQKGADFVKAFLCGFEVDDALALLRLEDLFVETFEIKDVKTLRGDHQSRAIGRLAGKGGRTKFTIENVTKTRIVLADSKIHILGSYQNIQLARRAICNLILGS 218
BLAST of CN184937 vs. ExPASy Swiss-Prot
Match: PNO1_XENLA (RNA-binding protein PNO1 OS=Xenopus laevis GN=pno1 PE=2 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 5.147e-59 Identity = 109/184 (59.24%), Postives = 145/184 (78.80%), Query Frame = 3 Query: 177 ESGSLPPK-PLFGPLKAHEMSGGRVQFRKVNVTPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILGS 725 + G P K P F P+ ++ G + + RK+ V HRY+PLK+ WM+I+TPI E +++ +R NLK+R VE+KT +T D+ L K ADFV AF+LGF V DA+AL+RLD+L++ESFE+ DVK L+G+HLSRAIGR++GKGGKTKF IEN TKTRIV+ADSKIHI+GSF NIK+AR ++C+LILGS Sbjct: 33 DMGEQPSKRPDFPPISGDKLMGDKDEMRKIPVPSHRYTPLKENWMKIFTPIVEHLQLQVRFNLKSRNVEIKTCKETTDVGALTKAADFVRAFILGFQVEDALALVRLDDLFLESFEVTDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTKTRIVLADSKIHIMGSFQNIKMARTAICNLILGS 216
BLAST of CN184937 vs. ExPASy Swiss-Prot
Match: PNO1_CHICK (RNA-binding protein PNO1 OS=Gallus gallus GN=PNO1 PE=2 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 5.147e-59 Identity = 113/183 (61.75%), Postives = 146/183 (79.78%), Query Frame = 3 Query: 180 SGSLPPK-PLFGPLKAHEMSGGRVQFRKVNVTPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILGS 725 +G P K P F PL A + G+ + RKV V +RY+PLK+ WM+I+TPI E +++ IR NLK R VE+KT ++T D+S L K ADFV AF+LGF V DA+AL+RLD+L++ESFE+ DVK L+G+HLSRAIGR++GKGGKTKF IEN T+TRIV+ADSKIHILGSF NIK+AR ++C+LILGS Sbjct: 40 AGPQPSKRPAFPPLPAAALGVGKGEVRKVPVPANRYTPLKENWMKIFTPIVEHLQLQIRFNLKTRNVEIKTCSETKDLSALTKAADFVKAFILGFQVEDALALIRLDDLFLESFEVTDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTRTRIVLADSKIHILGSFQNIKMARTAICNLILGS 222
BLAST of CN184937 vs. ExPASy Swiss-Prot
Match: PNO1_DANRE (RNA-binding protein PNO1 OS=Danio rerio GN=pno1 PE=2 SV=2) HSP 1 Score: 227.254 bits (578), Expect = 6.722e-59 Identity = 111/189 (58.73%), Postives = 147/189 (77.78%), Query Frame = 3 Query: 162 SQLQNESGSLPPK-PLFGPLKAHEMSGGRVQFRKVNVTPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILGS 725 +Q + S S P K P F L ++ GG + RKV V HRY+PLK+ W++I+TPI E +++ +R NLK R+VE+KT +T DI L + ADFV AF+LGF V DA+AL+RLDEL++E+F++ DVK L+G+HLSRAIGR++GKGGKTKF IEN TKTRIV+AD+KIHILGSF NIK+AR ++C+LILGS Sbjct: 44 TQTEESSSSAPVKRPHFPALSGDQLGGGVDEMRKVPVPSHRYTPLKENWLKIFTPIVENLQLQVRFNLKTRQVEIKTCKETQDIGALTRAADFVKAFVLGFQVEDALALIRLDELFLETFDVTDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTKTRIVLADTKIHILGSFQNIKMARTAICNLILGS 232
BLAST of CN184937 vs. ExPASy Swiss-Prot
Match: PNO1_XENTR (RNA-binding protein PNO1 OS=Xenopus tropicalis GN=pno1 PE=2 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.147e-58 Identity = 109/184 (59.24%), Postives = 144/184 (78.26%), Query Frame = 3 Query: 177 ESGSLPPK-PLFGPLKAHEMSGGRVQFRKVNVTPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILGS 725 ++G P K P F P+ ++ G + + RKV V HRY+PLK+ WM+I+TPI E +++ +R NLK R VE+KT +T D+ L K DFV AF+LGF V DA+AL+RLD+L++ESFE+ DVK L+G+HLSRAIGR++GKGGKTKF IEN T+TRIV+ADSKIHILGSF NIK+AR ++C+LILGS Sbjct: 33 DTGEQPSKRPDFPPISGDKLMGDKDEMRKVPVPSHRYTPLKENWMKIFTPIVEHLQLQVRFNLKTRNVEIKTCKETTDVGALTKATDFVRAFILGFQVEDALALVRLDDLFLESFEVTDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTRTRIVLADSKIHILGSFQNIKMARTAICNLILGS 216
BLAST of CN184937 vs. ExPASy Swiss-Prot
Match: PNO1_RAT (RNA-binding protein PNO1 OS=Rattus norvegicus GN=Pno1 PE=2 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 5.690e-58 Identity = 107/187 (57.22%), Postives = 145/187 (77.54%), Query Frame = 3 Query: 165 QLQNESGSLPPKPLFGPLKAHEMSGGRVQFRKVNVTPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILGS 725 ++ E +P+F PL ++ G+ + RK+ V +RY+PLK+ WM+I+TPI E + + IR NLK+R VE++T DT D+S L K ADFV AF+LGF V DA+AL+RLD+L++ESFEI DVK L+G+HLSRAIGR++GKGGKTKF IEN T+TRIV+AD K+HILGSF NIK+AR ++C+LILG+ Sbjct: 42 RMDTEEARPAKRPVFPPLSGDQLLTGKEETRKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKDTKDVSALTKAADFVKAFVLGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTRTRIVLADVKVHILGSFQNIKMARTAICNLILGN 228
BLAST of CN184937 vs. ExPASy Swiss-Prot
Match: PNO1_CANAL (Pre-rRNA-processing protein PNO1 OS=Candida albicans GN=PNO1 PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.268e-57 Identity = 119/192 (61.98%), Postives = 146/192 (76.04%), Query Frame = 3 Query: 150 ETVPSQLQNESGSLPPKPLFGPLKAHEMSGGRVQFRKVNVTPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILGS 725 ET QL +ESG KP F M +++ RKV V PHR +PLK +W +IY P+ E +K+ +RMNLK + VEL+T T D+ LQK ADFV AF LGFDV DAIALLRLD+LYIE+FEIKDVKTL G+HLSRAIGR++GK GKTKFAIENAT+TRIV+ADSKIHILG F +I++AR+++ SLILGS Sbjct: 71 ETTELQL-DESG----KPKFSAASKSNMKV-KLESRKVAVPPHRMTPLKNVWSKIYPPLVEHLKLQVRMNLKTKTVELRTNKYTTDVGALQKGADFVKAFTLGFDVDDAIALLRLDDLYIETFEIKDVKTLTGDHLSRAIGRIAGKDGKTKFAIENATRTRIVLADSKIHILGGFTHIRMAREAVVSLILGS 256
BLAST of CN184937 vs. ExPASy Swiss-Prot
Match: PNO1_ORYLA (RNA-binding protein PNO1 OS=Oryzias latipes GN=pno1 PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.824e-57 Identity = 107/176 (60.80%), Postives = 142/176 (80.68%), Query Frame = 3 Query: 198 KPLFGPLKAHEMSGGRVQFRKVNVTPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILGS 725 +P F P+ A ++ G + RKV V HRY+PLK+ W++I+TPI E +++ +R NLK R VE+KT +T DI+ L K ADF+ AF+LGF V DA+AL+RLDEL++ESF++ DVK L+G+HLSRAIGR++GKGGKTKF IEN TKTRIV+AD+KIHILGSF NIK+AR ++C+LILGS Sbjct: 49 RPHFPPISADKLRGPD-EMRKVAVPAHRYTPLKENWLKIFTPIVENLQLQVRFNLKTRNVEIKTCKETQDIAALTKAADFIKAFVLGFQVDDAMALIRLDELFLESFDVTDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTKTRIVLADTKIHILGSFQNIKMARTAICNLILGS 223 The following BLAST results are available for this feature:
BLAST of CN184937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184937 ID=CN184937; Name=CN184937; organism=Citrus sinensis; type=EST; length=727bpback to top |