CN184934
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184934 vs. ExPASy Swiss-Prot
Match: PIGS_MOUSE (GPI transamidase component PIG-S OS=Mus musculus GN=Pigs PE=1 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 1.463e-14 Identity = 44/149 (29.53%), Postives = 85/149 (57.05%), Query Frame = -3 Query: 301 PSGKGFTEWELDVLSRQFACFNLHSCSTTLGSLSRLVQSLPRMIIMDEIGKLVQFSLEAAKLSQSNASLGDNESSAVSSGQARSLAEDAFFHPSIMSISYYSFEHCFAIYSPFFLPVSMHVLLAALREWKRYKQEKAKYTAWKAKVKVE 747 P +G WELD L + NL + +TTL SL++L+ + ++I D++ V ++ A + + +LG S+ +S +A + +E AFF PS++ + Y+ + FAIY P FLP+++ +LL+ ++ ++ ++ +WK K++ Sbjct: 413 PKSEGLMTWELDRLLWARSVENLATATTTLTSLAQLLGKISNIVIKDDVASEVYRAVAAVQKAAKALALGHLSSAFAASQEAVTSSERAFFDPSLLHLLYFPDDQKFAIYIPLFLPMAVPILLSLVKIFQETRK------SWKKPEKID 555
BLAST of CN184934 vs. ExPASy Swiss-Prot
Match: PIGS_RAT (GPI transamidase component PIG-S OS=Rattus norvegicus GN=Pigs PE=2 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 4.257e-14 Identity = 44/149 (29.53%), Postives = 83/149 (55.70%), Query Frame = -3 Query: 301 PSGKGFTEWELDVLSRQFACFNLHSCSTTLGSLSRLVQSLPRMIIMDEIGKLVQFSLEAAKLSQSNASLGDNESSAVSSGQARSLAEDAFFHPSIMSISYYSFEHCFAIYSPFFLPVSMHVLLAALREWKRYKQEKAKYTAWKAKVKVE 747 P +G WELD L + NL + +TTL SL++L+ + ++I D++ V ++ A + + +LG S+ +S +A + +E AFF PS++ + Y+ + FAIY P FLP+++ +LL+ ++ + + +WK K++ Sbjct: 413 PKSEGLMTWELDRLLWARSVENLATATTTLTSLAQLLGKISNIVIKDDVASEVYRAVAAVQKAAEALALGHLSSAFAASQEAVTSSERAFFDPSLLHLLYFPDDQKFAIYIPLFLPMAVPILLSLVKIFLE------THKSWKKPEKID 555
BLAST of CN184934 vs. ExPASy Swiss-Prot
Match: PIGS_HUMAN (GPI transamidase component PIG-S OS=Homo sapiens GN=PIGS PE=1 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 5.559e-14 Identity = 42/127 (33.07%), Postives = 76/127 (59.84%), Query Frame = -3 Query: 367 PSGKGFTEWELDVLSRQFACFNLHSCSTTLGSLSRLVQSLPRMIIMDEIGKLVQFSLEAAKLSQSNASLGDNESSAVSSGQARSLAEDAFFHPSIMSISYYSFEHCFAIYSPFFLPVSMHVLLAALR 747 P+ +G WELD L + NL + +TTL SL++L+ + ++I D++ V ++ A + S + G S+ V+S +A + +E AFF PS++ + Y+ + FAIY P FLP+++ +LL+ ++ Sbjct: 413 PTSEGLMTWELDRLLWARSVENLATATTTLTSLAQLLGKISNIVIKDDVASEVYKAVAAVQKSAEELASGHLASAFVASQEAVTSSELAFFDPSLLHLLYFPDDQKFAIYIPLFLPMAVPILLSLVK 539
BLAST of CN184934 vs. ExPASy Swiss-Prot
Match: PIGS_BOVIN (GPI transamidase component PIG-S OS=Bos taurus GN=PIGS PE=2 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 1.617e-13 Identity = 41/127 (32.28%), Postives = 73/127 (57.48%), Query Frame = -3 Query: 367 PSGKGFTEWELDVLSRQFACFNLHSCSTTLGSLSRLVQSLPRMIIMDEIGKLVQFSLEAAKLSQSNASLGDNESSAVSSGQARSLAEDAFFHPSIMSISYYSFEHCFAIYSPFFLPVSMHVLLAALR 747 P +G WELD L + NL + +TTL SL++L+ + ++I D++ V ++ A + + S G S+ +S +A + +E AFF PS++ + Y+ + FAIY P FLP+++ +LL+ + Sbjct: 413 PKSEGIMTWELDRLLWARSVENLATATTTLTSLAQLLGKISNIVIKDDVASEVYRAVAAVQKAAEELSSGHLASAFAASQEAVTSSERAFFDPSLLHLLYFPDDQKFAIYIPLFLPMAVPILLSLFK 539 The following BLAST results are available for this feature:
BLAST of CN184934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN184934 ID=CN184934; Name=CN184934; organism=Citrus sinensis; type=EST; length=764bpback to top |