DC887578

Overview
NameDC887578
Unique NameDC887578
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length532
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC887578 vs. ExPASy Swiss-Prot
Match: CDPK4_ARATH (Calcium-dependent protein kinase 4 OS=Arabidopsis thaliana GN=CPK4 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.537e-20
Identity = 45/69 (65.22%), Postives = 59/69 (85.51%), Query Frame = -3
Query:  324 QACKEFGLGEVPLDEIVKEIDQDNDGRIDYGEFATMMRQSEGGVGKSRTMRNSLNFNIADAFGVKDPST 530
            QAC EFGL + PLD+++KEID DNDG+ID+ EF  MM++ + GVG+SRTMRN+LNFNIA+AFGV+D S+
Sbjct:  425 QACTEFGLCDTPLDDMIKEIDLDNDGKIDFSEFTAMMKKGD-GVGRSRTMRNNLNFNIAEAFGVEDTSS 492          
BLAST of DC887578 vs. ExPASy Swiss-Prot
Match: CDPKB_ARATH (Calcium-dependent protein kinase 11 OS=Arabidopsis thaliana GN=CPK11 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.374e-18
Identity = 45/71 (63.38%), Postives = 56/71 (78.87%), Query Frame = -3
Query:  315 ACKEFGLGEVPLDEIVKEIDQDNDGRIDYGEFATMMRQSEGGVGKSRTMRNSLNFNIADAFGVKDPSTADD 527
            AC EFGL + PLD+++KEID DNDG+ID+ EF  MMR+ + GVG+SRTM  +LNFNIADAFGV D   +DD
Sbjct:  427 ACTEFGLCDTPLDDMIKEIDLDNDGKIDFSEFTAMMRKGD-GVGRSRTMMKNLNFNIADAFGV-DGEKSDD 495          
BLAST of DC887578 vs. ExPASy Swiss-Prot
Match: CDPK_SOYBN (Calcium-dependent protein kinase SK5 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 9.975e-17
Identity = 40/66 (60.61%), Postives = 54/66 (81.82%), Query Frame = -3
Query:  333 QACKEFGLGEVPLDEIVKEIDQDNDGRIDYGEFATMMRQSEGGVGKSRTMRNSLNFNIADAFGVKD 530
            QACK+FGL ++ +D+++KEIDQDNDG+IDYGEFA MMR+  GG+G+ RTMR +L  N+ DA G+ D
Sbjct:  434 QACKDFGLDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKGNGGIGR-RTMRKTL--NLRDALGLVD 496          
BLAST of DC887578 vs. ExPASy Swiss-Prot
Match: CDPK5_ARATH (Calcium-dependent protein kinase 5 OS=Arabidopsis thaliana GN=CPK5 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.080e-14
Identity = 36/61 (59.02%), Postives = 49/61 (80.33%), Query Frame = -3
Query:  348 QACKEFGLGEVPLDEIVKEIDQDNDGRIDYGEFATMMRQSEGGVGKSRTMRNSLNFNIADA 530
            QAC E G+ +V L++I+KE+DQ+NDG+IDYGEF  MM++   GVG+ RTMRNSLN ++ DA
Sbjct:  497 QACVEHGMADVFLEDIIKEVDQNNDGKIDYGEFVEMMQKGNAGVGR-RTMRNSLNISMRDA 556          
BLAST of DC887578 vs. ExPASy Swiss-Prot
Match: CDPKC_ARATH (Calcium-dependent protein kinase 12 OS=Arabidopsis thaliana GN=CPK12 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.051e-14
Identity = 38/59 (64.41%), Postives = 47/59 (79.66%), Query Frame = -3
Query:  363 QACKEFGLGEVPLDEIVKEIDQDNDGRIDYGEFATMMRQSE---GGVGKSRTMRNSLNF 530
            QA KEFG+ +  LDE++K+IDQDNDG+IDYGEF  MMR+     GG+G+ RTMRNSLNF
Sbjct:  422 QAWKEFGINDSNLDEMIKDIDQDNDGQIDYGEFVAMMRKGNGTGGGIGR-RTMRNSLNF 479          
BLAST of DC887578 vs. ExPASy Swiss-Prot
Match: CDPK6_ARATH (Calcium-dependent protein kinase 6 OS=Arabidopsis thaliana GN=CPK6 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.123e-13
Identity = 34/60 (56.67%), Postives = 47/60 (78.33%), Query Frame = -3
Query:  351 QACKEFGLGEVPLDEIVKEIDQDNDGRIDYGEFATMMRQSEGGVGKSRTMRNSLNFNIAD 530
            Q+C E G+ +V L++I+KE+DQDNDGRIDY EF  MM++   GVG+ RTM+NSLN ++ D
Sbjct:  485 QSCIEHGMTDVFLEDIIKEVDQDNDGRIDYEEFVAMMQKGNAGVGR-RTMKNSLNISMRD 543          
BLAST of DC887578 vs. ExPASy Swiss-Prot
Match: CDPK5_SOLTU (Calcium-dependent protein kinase 5 OS=Solanum tuberosum GN=CPK5 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.123e-13
Identity = 34/63 (53.97%), Postives = 48/63 (76.19%), Query Frame = -3
Query:  342 QACKEFGLGEVPLDEIVKEIDQDNDGRIDYGEFATMMRQSEGGVGKSRTMRNSLNFNIADAFG 530
            QAC +  + +V  ++I++E+DQDNDGRIDYGEF  MM++    +G+ RTMRNSLNF++ DA G
Sbjct:  472 QACADHNITDVFFEDIIREVDQDNDGRIDYGEFVAMMQKGNPCIGR-RTMRNSLNFSMRDAPG 533          
BLAST of DC887578 vs. ExPASy Swiss-Prot
Match: CDPK4_SOLTU (Calcium-dependent protein kinase 4 OS=Solanum tuberosum GN=CPK4 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.141e-12
Identity = 34/65 (52.31%), Postives = 48/65 (73.85%), Query Frame = -3
Query:  336 QACKEFGLGEVPLDEIVKEIDQDNDGRIDYGEFATMMRQSEGGVGKSRTMRNSLNFNIADAFGVK 530
            QAC E  + +V  ++I++E+DQDNDGRIDYGEF  MM++    +G+ RTMRNSLN ++ DA G +
Sbjct:  494 QACIEHNMTDVYFEDIIREVDQDNDGRIDYGEFVAMMQKGNPCIGR-RTMRNSLNLSMRDAPGAQ 557          
The following BLAST results are available for this feature:
BLAST of DC887578 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
CDPK4_ARATH2.537e-2065.22Calcium-dependent protein kinase 4 OS=Arabidopsis ... [more]
CDPKB_ARATH2.374e-1863.38Calcium-dependent protein kinase 11 OS=Arabidopsis... [more]
CDPK_SOYBN9.975e-1760.61Calcium-dependent protein kinase SK5 OS=Glycine ma... [more]
CDPK5_ARATH2.080e-1459.02Calcium-dependent protein kinase 5 OS=Arabidopsis ... [more]
CDPKC_ARATH6.051e-1464.41Calcium-dependent protein kinase 12 OS=Arabidopsis... [more]
CDPK6_ARATH5.123e-1356.67Calcium-dependent protein kinase 6 OS=Arabidopsis ... [more]
CDPK5_SOLTU5.123e-1353.97Calcium-dependent protein kinase 5 OS=Solanum tube... [more]
CDPK4_SOLTU1.141e-1252.31Calcium-dependent protein kinase 4 OS=Solanum tube... [more]
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Properties
Property NameValue
Genbank descriptionDC887578 EIC Citrus sinensis cDNA clone EIC0582 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887578 ID=DC887578; Name=DC887578; organism=Citrus sinensis; type=EST; length=532bp
GGAGACTATAACATTAGATACAACTCCTGCTTTTGTTTCGAGTAACATTG
ATCTTCCAGTGTAAGGAAATGGAACAGATCAAAGATGAGATGTTAATAAA
CAACATTATGAAAATGAAATTAGTTTCAATGAAACCTCGTCACCAAACCT
AAAAAGAACATTAGAGGAGTTCATTCAACCAAAACATTAGAAAGGAAGGA
GCCCCAAAAAAAAAAAAATCAATGTCAGGAAGCTTCTATCTAGACTTTGC
ACTTGATAGTGTCGGCGTGATAGCATGCATGTTTGTTCCCTGACCATACA
GAAGATTGGTTTCAGTCATCAGCTGTGCTTGGATCTTTTACGCCAAAAGC
ATCTGCGATATTAAAGTTCAAACTGTTTCTCATAGTTCTGCTTTTTCCAA
CTCCTCCCTCACTCTGTCTCATCATTGTGGCAAACTCCCCATAATCTATT
CTCCCATCATTGTCTTGATCAATTTCTTTGACAATCTCATCCAGAGGAAC
TTCGCCTAGACCAAACTCTTTGCAGGCCTGTT
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