CN184928
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184928 vs. ExPASy Swiss-Prot
Match: LWD1_ARATH (WD repeat-containing protein LWD1 OS=Arabidopsis thaliana GN=LWD1 PE=2 SV=1) HSP 1 Score: 295.434 bits (755), Expect = 1.198e-86 Identity = 139/158 (87.97%), Postives = 147/158 (93.04%), Query Frame = 1 Query: 205 MGVSSDPNLDGLDEQQKRSEIYTYESPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSTGEIRADPNLSFEHPYPPTKTIFIPDKECQKPDLLATSSDFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDT 678 MG SSDP DG DEQQKRSEIYTYE+PWHIYAMNWSVRRDKKYRLAI SLLEQYPNRVEIVQLD+S GEIR+DPNLSFEHPYPPTKTIFIPDKECQ+PDLLATSSDFLR+WRI+D+ RVELKS LN NKNSE+CGPLTSFDWNEAEPRRIGTSS DT Sbjct: 1 MGTSSDPIQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAITSLLEQYPNRVEIVQLDESNGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRLWRIADDHSRVELKSCLNSNKNSEFCGPLTSFDWNEAEPRRIGTSSTDT 158 HSP 2 Score: 45.0542 bits (105), Expect = 1.198e-86 Identity = 20/27 (74.07%), Postives = 22/27 (81.48%), Query Frame = 2 Query: 656 LGRLVSTPTCTIWDIEREAVDTQLIAH 736 +G + TCTIWDIEREAVDTQLIAH Sbjct: 151 IGTSSTDTTCTIWDIEREAVDTQLIAH 177
BLAST of CN184928 vs. ExPASy Swiss-Prot
Match: LWD2_ARATH (WD repeat-containing protein LWD2 OS=Arabidopsis thaliana GN=LWD2 PE=2 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 1.434e-78 Identity = 127/158 (80.38%), Postives = 142/158 (89.87%), Query Frame = 1 Query: 205 MGVSSDPNLDGLDEQQKRSEIYTYESPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSTGEIRADPNLSFEHPYPPTKTIFIPDKECQKPDLLATSSDFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDT 678 M SSD +G +EQ KRSEIYTYE+PW IYAMNWS+RRDKKYRLAI SL+EQYPNRVEIVQLD+S GEIR+DPNL FEHPYPPTKT FIPDKECQ+PDLLATSSDFLR+WRISD++ RVELKS L+ +KNSE+ GP+TSFDWNEAEPRRIGTSSIDT Sbjct: 1 MVTSSDQIQNGSEEQSKRSEIYTYEAPWQIYAMNWSIRRDKKYRLAITSLIEQYPNRVEIVQLDESNGEIRSDPNLCFEHPYPPTKTSFIPDKECQRPDLLATSSDFLRLWRISDDESRVELKSCLSSDKNSEFSGPITSFDWNEAEPRRIGTSSIDT 158 HSP 2 Score: 42.743 bits (99), Expect = 1.434e-78 Identity = 18/19 (94.74%), Postives = 18/19 (94.74%), Query Frame = 2 Query: 680 TCTIWDIEREAVDTQLIAH 736 TCTIWDIERE VDTQLIAH Sbjct: 159 TCTIWDIEREVVDTQLIAH 177
BLAST of CN184928 vs. ExPASy Swiss-Prot
Match: DCAF7_MOUSE (DDB1- and CUL4-associated factor 7 OS=Mus musculus GN=Dcaf7 PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 5.275e-44 Identity = 81/142 (57.04%), Postives = 107/142 (75.35%), Query Frame = 1 Query: 253 KRSEIYTYESPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSTGEIRADPNLSFEHPYPPTKTIFIPDKECQKPDLLATSSDFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDT 678 KR EIY YE+PW +YAMNWSVR DK++RLA+ S +E+Y N+V++V LD+ + E +F+HPYP TK ++IPD + PDLLATS D+LRVWR+ + + R+E LLN NKNS++C PLTSFDWNE +P +GTSSIDT Sbjct: 6 KRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFIC--RNTFDHPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLE--CLLNNNKNSDFCAPLTSFDWNEVDPYLLGTSSIDT 143 HSP 2 Score: 23.0978 bits (48), Expect = 5.275e-44 Identity = 15/38 (39.47%), Postives = 16/38 (42.11%), Query Frame = 2 Query: 656 LGRLVSTPTCTIWDIEREA-----------VDTQLIAH 736 LG TCTIW +E V TQLIAH Sbjct: 136 LGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAH 173
BLAST of CN184928 vs. ExPASy Swiss-Prot
Match: DCAF7_HUMAN (DDB1- and CUL4-associated factor 7 OS=Homo sapiens GN=DCAF7 PE=1 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 5.275e-44 Identity = 81/142 (57.04%), Postives = 107/142 (75.35%), Query Frame = 1 Query: 253 KRSEIYTYESPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSTGEIRADPNLSFEHPYPPTKTIFIPDKECQKPDLLATSSDFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDT 678 KR EIY YE+PW +YAMNWSVR DK++RLA+ S +E+Y N+V++V LD+ + E +F+HPYP TK ++IPD + PDLLATS D+LRVWR+ + + R+E LLN NKNS++C PLTSFDWNE +P +GTSSIDT Sbjct: 6 KRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFIC--RNTFDHPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLE--CLLNNNKNSDFCAPLTSFDWNEVDPYLLGTSSIDT 143 HSP 2 Score: 23.0978 bits (48), Expect = 5.275e-44 Identity = 15/38 (39.47%), Postives = 16/38 (42.11%), Query Frame = 2 Query: 656 LGRLVSTPTCTIWDIEREA-----------VDTQLIAH 736 LG TCTIW +E V TQLIAH Sbjct: 136 LGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAH 173
BLAST of CN184928 vs. ExPASy Swiss-Prot
Match: DCAF7_DICDI (DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum GN=wdr68 PE=3 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 1.265e-42 Identity = 74/142 (52.11%), Postives = 100/142 (70.42%), Query Frame = 1 Query: 253 KRSEIYTYESPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSTGEIRADPNLSFEHPYPPTKTIFIPDKECQKPDLLATSSDFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDT 678 ++ IYTY SPW IY ++WS R ++ +RLAI S LE Y NRV+++QL++ T + FEHPYPPTK ++IPDK +PDLLAT+ D+LR+W + R ++LKSLL N SE+C PL+SFDWNE +P + TSSIDT Sbjct: 2 EKKRIYTYNSPWVIYGLSWSSRVNRPFRLAIGSFLEDYTNRVDVIQLNEETDQFEVV--CGFEHPYPPTKCMWIPDKNSNRPDLLATTGDYLRLWEVGSNQRSIKLKSLLT-NVISEFCAPLSSFDWNETDPSLLATSSIDT 140 HSP 2 Score: 31.187 bits (69), Expect = 1.265e-42 Identity = 13/19 (68.42%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 680 TCTIWDIEREAVDTQLIAH 736 TCTIW+IE TQLIAH Sbjct: 141 TCTIWNIETGQAKTQLIAH 159
BLAST of CN184928 vs. ExPASy Swiss-Prot
Match: TTG1_ARATH (Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana GN=TTG1 PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 2.325e-41 Identity = 72/149 (48.32%), Postives = 100/149 (67.11%), Query Frame = 1 Query: 241 DEQQKRSEIYTYESPWHIYAMNWS-VRRDKKYRLAIASLLEQYPNRVEIVQLDDSTGEIRADPNLSFEHPYPPTKTIFIPD--KECQKPDLLATSSDFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDT 678 D + TY+SP+ +YAM +S +R +R+A+ S LE Y NR++I+ D + ++ PNLSFEHPYPPTK +F P + DLLA+S DFLR+W I+++ VE S+LN +K SE+C PLTSFDWN+ EP+R+GT SIDT Sbjct: 7 DSLSRSETAVTYDSPYPLYAMAFSSLRSSSGHRIAVGSFLEDYNNRIDILSFDSDSMTVKPLPNLSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDT 155 HSP 2 Score: 38.891 bits (89), Expect = 2.325e-41 Identity = 17/27 (62.96%), Postives = 19/27 (70.37%), Query Frame = 2 Query: 656 LGRLVSTPTCTIWDIEREAVDTQLIAH 736 LG TCTIWDIE+ V+TQLIAH Sbjct: 148 LGTCSIDTTCTIWDIEKSVVETQLIAH 174
BLAST of CN184928 vs. ExPASy Swiss-Prot
Match: YBE8_SCHPO (Uncharacterized WD repeat-containing protein C17D11.08 OS=Schizosaccharomyces pombe GN=SPBC17D11.08 PE=1 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 9.832e-12 Identity = 43/146 (29.45%), Postives = 74/146 (50.68%), Query Frame = 1 Query: 274 YESPWHIYAMNWSVRRDKKYR---LAIASLLEQYPNRVEIVQL---DDSTGEIRADPNLSFEHPYPPTKTIFIPDKECQKPD--LLATSSDFLRVWRISDE---DRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDT 678 Y +PW +A++W + KY +A+ SL E+ N +++++L DD + + + YP TK ++ P D LLA++ LR+W+ E D + ++ L+ + + PLTSFDW + +P I SS+DT Sbjct: 47 YNAPWIPFALDWL--KQGKYSSEWIAMGSLNEEPNNMIQLLKLITGDDGNSHLEK-AQAATDLEYPVTKLLWNPSSVGSNTDSQLLASTDQQLRLWKTDFEAGIDSPLLCQASLSTHVKTHNNAPLTSFDWCKTDPSYIVVSSLDT 189 HSP 2 Score: 30.8018 bits (68), Expect = 9.832e-12 Identity = 12/19 (63.16%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 680 TCTIWDIEREAVDTQLIAH 736 TCT+WDI + TQLIAH Sbjct: 190 TCTVWDIVAQQSKTQLIAH 208 The following BLAST results are available for this feature:
BLAST of CN184928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN184928 ID=CN184928; Name=CN184928; organism=Citrus sinensis; type=EST; length=737bpback to top |