CN184923

Overview
NameCN184923
Unique NameCN184923
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2453 contig Csv1_Contig2453:1..629. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN184923 vs. ExPASy Swiss-Prot
Match: VATL_TOBAC (V-type proton ATPase 16 kDa proteolipid subunit OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 9.867e-51
Identity = 103/150 (68.67%), Postives = 106/150 (70.67%), Query Frame = 2 
Query:   56 MPSTFGGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGISPKARSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLM 505
            MPSTF GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGI+PK +SYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGL+
Sbjct:    1 MPSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKTKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLI 150

HSP 2 Score: 30.8018 bits (68), Expect = 9.867e-51
Identity = 15/17 (88.24%), Postives = 16/17 (94.12%), Query Frame = 3 
Query:  501 LCVGIILSSRAGQSRAD 551
            L VGIILSSRAGQSRA+
Sbjct:  149 LIVGIILSSRAGQSRAE 165
[Close]
BLAST of CN184923 vs. ExPASy Swiss-Prot
Match: VATL_KALDA (V-type proton ATPase 16 kDa proteolipid subunit OS=Kalanchoe daigremontiana PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 9.867e-51
Identity = 103/150 (68.67%), Postives = 106/150 (70.67%), Query Frame = 2 
Query:   56 MPSTFGGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGISPKARSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLM 505
            M STF GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGI+PKA+SYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGL+
Sbjct:    1 MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLI 150

HSP 2 Score: 32.3426 bits (72), Expect = 9.867e-51
Identity = 16/17 (94.12%), Postives = 16/17 (94.12%), Query Frame = 3 
Query:  501 LCVGIILSSRAGQSRAD 551
            L VGIILSSRAGQSRAD
Sbjct:  149 LIVGIILSSRAGQSRAD 165
[Close]
BLAST of CN184923 vs. ExPASy Swiss-Prot
Match: VATL_GOSHI (V-type proton ATPase 16 kDa proteolipid subunit OS=Gossypium hirsutum GN=CVA16-2 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.849e-50
Identity = 103/150 (68.67%), Postives = 106/150 (70.67%), Query Frame = 2 
Query:   56 MPSTFGGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGISPKARSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLM 505
            M STF GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGI+PKA+SYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGL+
Sbjct:    1 MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLI 150

HSP 2 Score: 30.8018 bits (68), Expect = 2.849e-50
Identity = 15/17 (88.24%), Postives = 16/17 (94.12%), Query Frame = 3 
Query:  501 LCVGIILSSRAGQSRAD 551
            L VGIILSSRAGQSRA+
Sbjct:  149 LIVGIILSSRAGQSRAE 165
[Close]
BLAST of CN184923 vs. ExPASy Swiss-Prot
Match: VATL2_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c2 OS=Arabidopsis thaliana GN=VHA-C2 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.849e-50
Identity = 103/150 (68.67%), Postives = 106/150 (70.67%), Query Frame = 2 
Query:   56 MPSTFGGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGISPKARSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLM 505
            M STF GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGI+PKA+SYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGL+
Sbjct:    1 MASTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLI 150

HSP 2 Score: 30.8018 bits (68), Expect = 2.849e-50
Identity = 15/17 (88.24%), Postives = 16/17 (94.12%), Query Frame = 3 
Query:  501 LCVGIILSSRAGQSRAD 551
            L VGIILSSRAGQSRA+
Sbjct:  149 LIVGIILSSRAGQSRAE 165
[Close]
BLAST of CN184923 vs. ExPASy Swiss-Prot
Match: VATL1_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c1/c3/c5 OS=Arabidopsis thaliana GN=VHA-C1 PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 8.223e-50
Identity = 102/148 (68.92%), Postives = 105/148 (70.95%), Query Frame = 2 
Query:   62 STFGGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGISPKARSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLM 505
            STF GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGI+PKA+SYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGL+
Sbjct:    2 STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLI 149

HSP 2 Score: 30.8018 bits (68), Expect = 8.223e-50
Identity = 15/17 (88.24%), Postives = 16/17 (94.12%), Query Frame = 3 
Query:  501 LCVGIILSSRAGQSRAD 551
            L VGIILSSRAGQSRA+
Sbjct:  148 LIVGIILSSRAGQSRAE 164
[Close]
BLAST of CN184923 vs. ExPASy Swiss-Prot
Match: VATL_MESCR (V-type proton ATPase 16 kDa proteolipid subunit OS=Mesembryanthemum crystallinum GN=VMAC1 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 8.223e-50
Identity = 101/150 (67.33%), Postives = 105/150 (70.00%), Query Frame = 2 
Query:   56 MPSTFGGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGISPKARSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLM 505
            M + F GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGI+PKA+SYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGL+
Sbjct:    1 MSTVFNGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLI 150

HSP 2 Score: 32.3426 bits (72), Expect = 8.223e-50
Identity = 16/17 (94.12%), Postives = 16/17 (94.12%), Query Frame = 3 
Query:  501 LCVGIILSSRAGQSRAD 551
            L VGIILSSRAGQSRAD
Sbjct:  149 LIVGIILSSRAGQSRAD 165
[Close]
BLAST of CN184923 vs. ExPASy Swiss-Prot
Match: VATL_BETVU (V-type proton ATPase 16 kDa proteolipid subunit OS=Beta vulgaris GN=VMAC1 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 8.223e-50
Identity = 101/150 (67.33%), Postives = 105/150 (70.00%), Query Frame = 2 
Query:   56 MPSTFGGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGISPKARSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLM 505
            M + F GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGI+PKA+SYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGL+
Sbjct:    1 MSTVFNGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLI 150

HSP 2 Score: 32.3426 bits (72), Expect = 8.223e-50
Identity = 16/17 (94.12%), Postives = 16/17 (94.12%), Query Frame = 3 
Query:  501 LCVGIILSSRAGQSRAD 551
            L VGIILSSRAGQSRAD
Sbjct:  149 LIVGIILSSRAGQSRAD 165
[Close]
BLAST of CN184923 vs. ExPASy Swiss-Prot
Match: VATL_ORYSJ (V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. japonica GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.397e-49
Identity = 101/150 (67.33%), Postives = 104/150 (69.33%), Query Frame = 2 
Query:   56 MPSTFGGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGISPKARSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLM 505
            M S F GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGI+PKA+ YYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGL+
Sbjct:    1 MSSVFSGDETAPFFGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLI 150

HSP 2 Score: 32.3426 bits (72), Expect = 1.397e-49
Identity = 16/17 (94.12%), Postives = 16/17 (94.12%), Query Frame = 3 
Query:  501 LCVGIILSSRAGQSRAD 551
            L VGIILSSRAGQSRAD
Sbjct:  149 LIVGIILSSRAGQSRAD 165
[Close]
BLAST of CN184923 vs. ExPASy Swiss-Prot
Match: VATL_ORYSI (V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. indica GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.397e-49
Identity = 101/150 (67.33%), Postives = 104/150 (69.33%), Query Frame = 2 
Query:   56 MPSTFGGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGISPKARSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLM 505
            M S F GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGI+PKA+ YYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGL+
Sbjct:    1 MSSVFSGDETAPFFGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLI 150

HSP 2 Score: 32.3426 bits (72), Expect = 1.397e-49
Identity = 16/17 (94.12%), Postives = 16/17 (94.12%), Query Frame = 3 
Query:  501 LCVGIILSSRAGQSRAD 551
            L VGIILSSRAGQSRAD
Sbjct:  149 LIVGIILSSRAGQSRAD 165
[Close]
BLAST of CN184923 vs. ExPASy Swiss-Prot
Match: VATL_PHAAU (V-type proton ATPase 16 kDa proteolipid subunit OS=Phaseolus aureus PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.821e-49
Identity = 100/148 (67.57%), Postives = 105/148 (70.95%), Query Frame = 2 
Query:   62 STFGGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGISPKARSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLM 505
            ++F GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGI+PKA+SYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGL+
Sbjct:    2 ASFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLI 149

HSP 2 Score: 32.3426 bits (72), Expect = 1.821e-49
Identity = 16/17 (94.12%), Postives = 16/17 (94.12%), Query Frame = 3 
Query:  501 LCVGIILSSRAGQSRAD 551
            L VGIILSSRAGQSRAD
Sbjct:  148 LIVGIILSSRAGQSRAD 164
The following BLAST results are available for this feature:
BLAST of CN184923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
VATL_TOBAC9.867e-5168.67V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_KALDA9.867e-5168.67V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_GOSHI2.849e-5068.67V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL2_ARATH2.849e-5068.67V-type proton ATPase 16 kDa proteolipid subunit c2... [more]
VATL1_ARATH8.223e-5068.92V-type proton ATPase 16 kDa proteolipid subunit c1... [more]
VATL_MESCR8.223e-5067.33V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_BETVU8.223e-5067.33V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_ORYSJ1.397e-4967.33V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_ORYSI1.397e-4967.33V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_PHAAU1.821e-4967.57V-type proton ATPase 16 kDa proteolipid subunit OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006F23_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006F23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184923 ID=CN184923; Name=CN184923; organism=Citrus sinensis; type=EST; length=630bp
GAGGAACAGTTCAACGCCGATCTAAAGCGACACCGTTTCAGATCTACAAT
CCACAATGCCTTCAACATTCGGCGGCGATGAAACGGCACCGTTCTTCGGC
TTCCTCGGCGCTGCCGCCGCCCTTGTCTTCTCCTGTATGGGAGCTGCGTA
TGGAACAGCCAAGAGTGGTGTTGGTGTGGCGTCAATGGGTGTTATGAGGC
CTGAGCTGGTGATGAAGTCGATTGTGCCAGTTGTTATGGCTGGTGTTTTG
GGTATATATGGTTTGATTATTGCTGTTATTATCAGTACTGGGATTAGCCC
CAAGGCCAGGTCATATTACCTTTTTGATGGCTATGCTCATCTCTCCTCCG
GTTTGGCTTGTGGTCTTGCCGGGCTTTCTGCTGGAATGGCTATTGGAATC
GTTGGTGACGCTGGTGTCAGAGCCAATGCACAGCAGCCAAAACTCTTTGT
TGGGATGATCCTTATCCTCATTTTCGCTGAAGCCCTTGCACTGTATGGCC
TTATGTGTTGGTATCATCTTGTCTTCACGTGCTGGTCAGTCCAGAGCAGA
TTAACAAGGGAATTTGTATTGCTAAGTATTCTTTTATAACTTGTCACTCT
GGAGGAGCGAGATTTTTTTTATATTATTCT
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