CN184911

Overview
NameCN184911
Unique NameCN184911
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10200 contig Csv1_Contig10200:2115..2778. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184911 vs. ExPASy Swiss-Prot
Match: SUS1_ARATH (Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1 PE=2 SV=3)

HSP 1 Score: 227.254 bits (578), Expect = 1.124e-62
Identity = 103/123 (83.74%), Postives = 116/123 (94.31%), Query Frame = -1
Query:  207 TCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVEE 575
            TCGLPTFATCKGGPAEIIV+GKSG+HIDPYHG+QAA+ L DFF KCK DPS+WD+IS GGL+RIEEKYTW+IYSQRLLTLTGVYGFWKHVSNLDRLE+RRYLEMFYALKYR LA++VPLA ++
Sbjct:  686 TCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFYALKYRPLAQAVPLAQDD 808          

HSP 2 Score: 32.7278 bits (73), Expect = 1.124e-62
Identity = 16/21 (76.19%), Postives = 16/21 (76.19%), Query Frame = -2
Query:  596 YICDTKGELFVQPALYEGLWL 658
            YICDTKG  FVQPALYE   L
Sbjct:  660 YICDTKGA-FVQPALYEAFGL 679          
BLAST of CN184911 vs. ExPASy Swiss-Prot
Match: SUSY_VICFA (Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 1.911e-62
Identity = 108/121 (89.26%), Postives = 118/121 (97.52%), Query Frame = -1
Query:  207 GLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVEE 569
            GLPTFAT  GGPAEIIV+GKSG+HIDPYHG++AA++LV+FFEK KADPS+WDKISLGGL+RIEEKYTW+IYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVEE
Sbjct:  686 GLPTFATLNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKADPSHWDKISLGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVEE 806          

HSP 2 Score: 28.8758 bits (63), Expect = 1.911e-62
Identity = 14/20 (70.00%), Postives = 15/20 (75.00%), Query Frame = -2
Query:  596 ICDTKGELFVQPALYEGLWL 655
            ICDTKG  FVQPA+YE   L
Sbjct:  659 ICDTKGA-FVQPAVYEAFGL 677          
BLAST of CN184911 vs. ExPASy Swiss-Prot
Match: SUSY_SOYBN (Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2)

HSP 1 Score: 231.491 bits (589), Expect = 1.911e-62
Identity = 106/122 (86.89%), Postives = 116/122 (95.08%), Query Frame = -1
Query:  210 TCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 575
            TCGLPTFATC GGPAEIIV+GKSG+HIDPYHG++AA++LVDFFEKCK DP++WDKIS  GL+RIEEKYTW+IYSQRLLTLTGVYGFWKHVSNLDR ESRRYLEMFYALKYRKLAESVPLA E
Sbjct:  684 TCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAADLLVDFFEKCKLDPTHWDKISKAGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAAE 805          

HSP 2 Score: 27.7202 bits (60), Expect = 1.911e-62
Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = -2
Query:  596 ICDTKGELFVQPALYEGLWL 655
            ICDT+G  FVQPA+YE   L
Sbjct:  659 ICDTRGA-FVQPAVYEAFGL 677          
BLAST of CN184911 vs. ExPASy Swiss-Prot
Match: SUSY_ALNGL (Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.127e-61
Identity = 112/144 (77.78%), Postives = 124/144 (86.11%), Query Frame = -1
Query:  210 RGAFCATCTV*GPLA*LLLRPWTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 641
            +G  CA   +       ++   TCGLPTFATCKGGPAEIIV+GKSG+HIDPYHGEQAA++LVDFFEK KADPS+W KISLGGL+RI EKYTWKIYS+RLLTLTGV  FWKHVSNLDRLESRRY+EMFYALKYRKLAESVPLAVE
Sbjct:  660 KGGLCAGPAIYEAFGLTVVESMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGEQAAQLLVDFFEKTKADPSHWAKISLGGLQRIHEKYTWKIYSERLLTLTGVTAFWKHVSNLDRLESRRYIEMFYALKYRKLAESVPLAVE 803          
BLAST of CN184911 vs. ExPASy Swiss-Prot
Match: SUSY_PHAAU (Sucrose synthase OS=Phaseolus aureus GN=SS1 PE=1 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 4.614e-61
Identity = 106/122 (86.89%), Postives = 116/122 (95.08%), Query Frame = -1
Query:  210 TCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 575
            TCGLPTFATC GGPAEIIV+GKSG+HIDPYHG++AA++LV+FFEK K DPS+WDKIS  GL+RIEEKYTW+IYSQRLLTLTGVYGFWKHVSNLDR ESRRYLEMFYALKYRKLAESVPLAVE
Sbjct:  684 TCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKVDPSHWDKISQAGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAVE 805          

HSP 2 Score: 25.409 bits (54), Expect = 4.614e-61
Identity = 13/20 (65.00%), Postives = 14/20 (70.00%), Query Frame = -2
Query:  596 ICDTKGELFVQPALYEGLWL 655
            I DTKG  FVQPA+YE   L
Sbjct:  659 IADTKGA-FVQPAVYEAFGL 677          
BLAST of CN184911 vs. ExPASy Swiss-Prot
Match: SUSY_MEDSA (Sucrose synthase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 6.016e-61
Identity = 106/120 (88.33%), Postives = 115/120 (95.83%), Query Frame = -1
Query:  210 GLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 569
            GLPTFAT  GGPAEIIV+GKSG+HIDPYHG++AA++LV+FFEK KADPS+WDKIS GGL+RIEEKYTW IYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE
Sbjct:  686 GLPTFATLNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKADPSHWDKISQGGLQRIEEKYTWTIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 805          

HSP 2 Score: 28.8758 bits (63), Expect = 6.016e-61
Identity = 14/20 (70.00%), Postives = 15/20 (75.00%), Query Frame = -2
Query:  596 ICDTKGELFVQPALYEGLWL 655
            ICDTKG  FVQPA+YE   L
Sbjct:  659 ICDTKGA-FVQPAVYEAFGL 677          
BLAST of CN184911 vs. ExPASy Swiss-Prot
Match: SUS1_DAUCA (Sucrose synthase isoform 1 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 8.365e-58
Identity = 104/123 (84.55%), Postives = 112/123 (91.06%), Query Frame = -1
Query:  207 TCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVEE 575
            TCGLPTFAT  GGPAEIIV+GKSG+HIDPYHGEQ AE+LV+FFEKCK DPS WD IS GGLKRI+EKYTW+IYS+RLLTL GVYGFWKHVS LDRLE RRYLEMFYALKYRKLAESVPLA +E
Sbjct:  686 TCGLPTFATLHGGPAEIIVHGKSGFHIDPYHGEQVAELLVNFFEKCKTDPSQWDAISAGGLKRIQEKYTWQIYSERLLTLAGVYGFWKHVSKLDRLEIRRYLEMFYALKYRKLAESVPLAKDE 808          
BLAST of CN184911 vs. ExPASy Swiss-Prot
Match: SUS1_HORVU (Sucrose synthase 1 OS=Hordeum vulgare GN=SS1 PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 3.811e-57
Identity = 97/127 (76.38%), Postives = 112/127 (88.19%), Query Frame = -1
Query:  210 LLRPWTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 590
            ++   TCGLPT ATC GGPAEIIV+G SG HIDPYH ++AA+ILV+FFEK  ADPSYWDKIS GGLKRI EKYTWK+YS+RL+TLTGVYGFWK+VSNL+R E+RRYLEMFYALKYR LA +VPLAV+
Sbjct:  675 VIEAMTCGLPTIATCHGGPAEIIVDGVSGLHIDPYHSDKAADILVNFFEKSTADPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 801          

HSP 2 Score: 31.187 bits (69), Expect = 3.811e-57
Identity = 15/21 (71.43%), Postives = 15/21 (71.43%), Query Frame = -2
Query:  596 YICDTKGELFVQPALYEGLWL 658
            YICDTKG  FVQPA YE   L
Sbjct:  654 YICDTKG-AFVQPAFYEAFGL 673          
BLAST of CN184911 vs. ExPASy Swiss-Prot
Match: SUS2_TULGE (Sucrose synthase 2 OS=Tulipa gesneriana PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 8.445e-57
Identity = 99/122 (81.15%), Postives = 111/122 (90.98%), Query Frame = -1
Query:  210 TCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 575
            TCGLPTFATC GGPAEIIV+G SGYHIDPYHG++AAE+LVDFFEK K D ++WD IS GGLKRI EKYTWKIYS+RLLTL GVYGFWK+VSNLDR E++RYLEMFYALKYR LA+SVPLAV+
Sbjct:  685 TCGLPTFATCHGGPAEIIVHGVSGYHIDPYHGDKAAELLVDFFEKSKKDQTHWDAISNGGLKRIYEKYTWKIYSERLLTLAGVYGFWKYVSNLDRRETKRYLEMFYALKYRNLAKSVPLAVD 806          

HSP 2 Score: 26.9498 bits (58), Expect = 8.445e-57
Identity = 13/21 (61.90%), Postives = 15/21 (71.43%), Query Frame = -2
Query:  596 YICDTKGELFVQPALYEGLWL 658
            YI D+KG +FVQPA YE   L
Sbjct:  659 YIADSKG-VFVQPAFYEAFGL 678          
BLAST of CN184911 vs. ExPASy Swiss-Prot
Match: SUS1_MAIZE (Sucrose synthase 1 OS=Zea mays GN=SH-1 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 1.436e-56
Identity = 93/127 (73.23%), Postives = 112/127 (88.19%), Query Frame = -1
Query:  210 LLRPWTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 590
            ++   TCGLPT ATC GGPAEIIV+G SG HIDPYH ++AA+ILV+FF+KCKADPSYWD+IS GGL+RI EKYTWK+YS+RL+TLTGVYGFWK+VSNL+R E+RRY+EMFYALKYR LA  VPL+ +
Sbjct:  676 VIESMTCGLPTIATCHGGPAEIIVDGVSGLHIDPYHSDKAADILVNFFDKCKADPSYWDEISQGGLQRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYIEMFYALKYRSLASQVPLSFD 802          

HSP 2 Score: 31.187 bits (69), Expect = 1.436e-56
Identity = 15/21 (71.43%), Postives = 15/21 (71.43%), Query Frame = -2
Query:  596 YICDTKGELFVQPALYEGLWL 658
            YICDTKG  FVQPA YE   L
Sbjct:  655 YICDTKG-AFVQPAFYEAFGL 674          
The following BLAST results are available for this feature:
BLAST of CN184911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
SUS1_ARATH1.124e-6283.74Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1... [more]
SUSY_VICFA1.911e-6289.26Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1[more]
SUSY_SOYBN1.911e-6286.89Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2[more]
SUSY_ALNGL2.127e-6177.78Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 S... [more]
SUSY_PHAAU4.614e-6186.89Sucrose synthase OS=Phaseolus aureus GN=SS1 PE=1 S... [more]
SUSY_MEDSA6.016e-6188.33Sucrose synthase OS=Medicago sativa PE=2 SV=1[more]
SUS1_DAUCA8.365e-5884.55Sucrose synthase isoform 1 OS=Daucus carota PE=2 S... [more]
SUS1_HORVU3.811e-5776.38Sucrose synthase 1 OS=Hordeum vulgare GN=SS1 PE=1 ... [more]
SUS2_TULGE8.445e-5781.15Sucrose synthase 2 OS=Tulipa gesneriana PE=2 SV=1[more]
SUS1_MAIZE1.436e-5673.23Sucrose synthase 1 OS=Zea mays GN=SH-1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006F14_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006F14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184911 ID=CN184911; Name=CN184911; organism=Citrus sinensis; type=EST; length=668bp
GAATTCGATTGAGGGGGGGAACACCCAAAAGTACAAACAATAGCTGAGAA
ATGCAAAAAGGCAAAAAAAAATTGGAAAAAAGAAAATTTAACGGGGGGAA
AAAAGTCTTTGTCCAATCGCAATCCCGGAAGCGACATTATTCTCCACAAC
TCAAGAAACCTCCACTCGGACCAACCACCCTGAGAGCTTCCCTCAATGTC
CATTTACTCCTCCACAGCCAGAGGAACAGATTCAGCCAGCTTACGGTACT
TGAGAGCATAAAACATTTCAAGGTATCGACGGCTCTCAAGACGATCAAGG
TTAGATACATGTTTCCAGAACCCATAGACTCCAGTCAGGGTCAGAAGCCT
CTGAGAGTAAATTTTCCATGTATACTTCTCTTCAATACGCTTCAGGCCAC
CCAGTGATATCTTGTCCCAGTATGAGGGATCTGCCTTGCACTTCTCAAAG
AAGTCAACAAGGATCTCAGCAGCCTGCTCACCATGGTAAGGATCAATGTG
GTAGCCAGATTTCCCGTTAACGATAATCTCAGCGGGGCCACCCTTGCAAG
TTGCAAATGTTGGCAATCCACAGGTCCATGGCCTCAACAACAGTCAAGCC
AAAGGCCCTCATACAGTGCAGGTTGCACAAAAAGCTCCCCTTTTGTATCA
CAAATGTACCCGGGTACA
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