CN184905

Overview
NameCN184905
Unique NameCN184905
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184905 vs. ExPASy Swiss-Prot
Match: FKB21_ARATH (FK506-binding protein 2-1 OS=Arabidopsis thaliana GN=FKBP15-1 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 1.762e-23
Identity = 42/53 (79.25%), Postives = 46/53 (86.79%), Query Frame = -3
Query:  466 LGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGKPASGEKT 624
            LG CVGEKRKLKIP+KLGYG  GSPP IPGGATLIFDTELV VNG+P+S  K+
Sbjct:   97 LGACVGEKRKLKIPSKLGYGDNGSPPKIPGGATLIFDTELVAVNGEPSSEAKS 149          

HSP 2 Score: 41.2022 bits (95), Expect = 1.762e-23
Identity = 17/21 (80.95%), Postives = 18/21 (85.71%), Query Frame = -2
Query:  620 PIEFELGSGHVIKGWDQGLFG 682
            PIEFELG+G VI GWDQGL G
Sbjct:   78 PIEFELGTGQVIPGWDQGLLG 98          
BLAST of CN184905 vs. ExPASy Swiss-Prot
Match: FKB22_ARATH (FK506-binding protein 2-2 OS=Arabidopsis thaliana GN=FKBP15-2 PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 5.836e-20
Identity = 48/71 (67.61%), Postives = 52/71 (73.24%), Query Frame = -3
Query:  469 PLNLSLAAVM*SKDGTKDFLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGKPASGEK 681
            P    L +    K   +  LG CVGEKRKLKIPAKLGYG QGSPPTIPGGATLIFDTEL+ VN KPA GE+
Sbjct:   78 PFEFKLGSGQVIKGWDQGLLGACVGEKRKLKIPAKLGYGEQGSPPTIPGGATLIFDTELIAVNEKPAGGEE 148          
BLAST of CN184905 vs. ExPASy Swiss-Prot
Match: FKB15_VICFA (FK506-binding protein 2 OS=Vicia faba GN=FKBP15 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.783e-19
Identity = 48/72 (66.67%), Postives = 53/72 (73.61%), Query Frame = -3
Query:  466 PLNLSLAAVM*SKDGTKDFLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGKPASGEKT 681
            P++  L      K   +  LGMC+GEKRKLKIPAKLGYG QGSPPTIPGGATLIFDTELV VN K  S EK+
Sbjct:   75 PIDFELGGGQVIKGWDQGLLGMCLGEKRKLKIPAKLGYGEQGSPPTIPGGATLIFDTELVGVNDKSLSEEKS 146          
BLAST of CN184905 vs. ExPASy Swiss-Prot
Match: FKBP2_DICDI (FK506-binding protein 2 OS=Dictyostelium discoideum GN=fkbp2 PE=3 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.855e-14
Identity = 29/44 (65.91%), Postives = 33/44 (75.00%), Query Frame = -3
Query:  493 LGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVN 624
            LGMCVGEKRKL IP  LGYG QG+   IPG + LIFD EL+ +N
Sbjct:   90 LGMCVGEKRKLIIPPSLGYGQQGAGDKIPGNSHLIFDVELIGIN 133          

HSP 2 Score: 37.7354 bits (86), Expect = 1.855e-14
Identity = 15/24 (62.50%), Postives = 18/24 (75.00%), Query Frame = -2
Query:  620 RVIPIEFELGSGHVIKGWDQGLFG 691
            R  P EF++G G VIKGWDQG+ G
Sbjct:   68 RGTPFEFKIGVGQVIKGWDQGVLG 91          
BLAST of CN184905 vs. ExPASy Swiss-Prot
Match: FKBP2_YEAST (FK506-binding protein 2 OS=Saccharomyces cerevisiae GN=FKB2 PE=1 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 1.954e-13
Identity = 27/42 (64.29%), Postives = 31/42 (73.81%), Query Frame = -3
Query:  496 GMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 621
            GMCVGEKRKL+IP+ L YG +G P  IP  A L+FD ELV V
Sbjct:   90 GMCVGEKRKLQIPSSLAYGERGVPGVIPPSADLVFDVELVDV 131          

HSP 2 Score: 38.1206 bits (87), Expect = 1.954e-13
Identity = 16/21 (76.19%), Postives = 17/21 (80.95%), Query Frame = -2
Query:  620 PIEFELGSGHVIKGWDQGLFG 682
            PI FELG G VIKGWDQG+ G
Sbjct:   70 PIAFELGVGRVIKGWDQGVAG 90          
BLAST of CN184905 vs. ExPASy Swiss-Prot
Match: FKBP2_YARLI (FK506-binding protein 2 OS=Yarrowia lipolytica GN=FPR2 PE=3 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 4.254e-13
Identity = 28/44 (63.64%), Postives = 33/44 (75.00%), Query Frame = -3
Query:  493 LGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVN 624
            LGMCVGEKRKL IP  L YG QG+   IP  +TLIF TELV+++
Sbjct:   93 LGMCVGEKRKLTIPPHLAYGKQGAGRVIPPDSTLIFTTELVSID 136          

HSP 2 Score: 36.965 bits (84), Expect = 4.254e-13
Identity = 14/21 (66.67%), Postives = 17/21 (80.95%), Query Frame = -2
Query:  620 PIEFELGSGHVIKGWDQGLFG 682
            PI+F LG+G VI GWDQG+ G
Sbjct:   74 PIQFPLGTGRVIPGWDQGILG 94          
BLAST of CN184905 vs. ExPASy Swiss-Prot
Match: FKBP2_KLULA (FK506-binding protein 2 OS=Kluyveromyces lactis GN=FPR2 PE=3 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 2.668e-12
Identity = 26/51 (50.98%), Postives = 35/51 (68.63%), Query Frame = -3
Query:  472 LGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGKPASGE 624
            LGMC+GE R L IP++LGYG++G+   IP  A LIF+TELV +  +    E
Sbjct:   89 LGMCIGEGRTLHIPSELGYGSRGAGSVIPPDADLIFETELVDIQREAVDDE 139          

HSP 2 Score: 36.5798 bits (83), Expect = 2.668e-12
Identity = 14/24 (58.33%), Postives = 18/24 (75.00%), Query Frame = -2
Query:  620 RVIPIEFELGSGHVIKGWDQGLFG 691
            R +PI+F+LG   VI GWDQG+ G
Sbjct:   67 RGVPIQFKLGYSQVISGWDQGILG 90          
BLAST of CN184905 vs. ExPASy Swiss-Prot
Match: FKBP2_MOUSE (FK506-binding protein 2 OS=Mus musculus GN=Fkbp2 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.702e-11
Identity = 33/62 (53.23%), Postives = 42/62 (67.74%), Query Frame = -3
Query:  496 PLNLSLAAVM*SKDGTKDFLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 681
            P   SL      K   +  LGMC GEKRKL IP++LGYG +G+PP IPGGATL+F+ EL+ +
Sbjct:   73 PFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEVELLKI 134          
BLAST of CN184905 vs. ExPASy Swiss-Prot
Match: FKBP2_HUMAN (FK506-binding protein 2 OS=Homo sapiens GN=FKBP2 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.702e-11
Identity = 33/62 (53.23%), Postives = 42/62 (67.74%), Query Frame = -3
Query:  496 PLNLSLAAVM*SKDGTKDFLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 681
            P   SL      K   +  LGMC GEKRKL IP++LGYG +G+PP IPGGATL+F+ EL+ +
Sbjct:   75 PFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEVELLKI 136          
BLAST of CN184905 vs. ExPASy Swiss-Prot
Match: FKBP2_BOVIN (FK506-binding protein 2 OS=Bos taurus GN=FKBP2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.702e-11
Identity = 33/62 (53.23%), Postives = 42/62 (67.74%), Query Frame = -3
Query:  496 PLNLSLAAVM*SKDGTKDFLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 681
            P   SL      K   +  LGMC GEKRKL IP++LGYG +G+PP IPGGATL+F+ EL+ +
Sbjct:   73 PFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEVELLKI 134          
The following BLAST results are available for this feature:
BLAST of CN184905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
FKB21_ARATH1.762e-2379.25FK506-binding protein 2-1 OS=Arabidopsis thaliana ... [more]
FKB22_ARATH5.836e-2067.61FK506-binding protein 2-2 OS=Arabidopsis thaliana ... [more]
FKB15_VICFA3.783e-1966.67FK506-binding protein 2 OS=Vicia faba GN=FKBP15 PE... [more]
FKBP2_DICDI1.855e-1465.91FK506-binding protein 2 OS=Dictyostelium discoideu... [more]
FKBP2_YEAST1.954e-1364.29FK506-binding protein 2 OS=Saccharomyces cerevisia... [more]
FKBP2_YARLI4.254e-1363.64FK506-binding protein 2 OS=Yarrowia lipolytica GN=... [more]
FKBP2_KLULA2.668e-1250.98FK506-binding protein 2 OS=Kluyveromyces lactis GN... [more]
FKBP2_MOUSE1.702e-1153.23FK506-binding protein 2 OS=Mus musculus GN=Fkbp2 P... [more]
FKBP2_HUMAN1.702e-1153.23FK506-binding protein 2 OS=Homo sapiens GN=FKBP2 P... [more]
FKBP2_BOVIN1.702e-1153.23FK506-binding protein 2 OS=Bos taurus GN=FKBP2 PE=... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0006F10_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184905 ID=CN184905; Name=CN184905; organism=Citrus sinensis; type=EST; length=701bp
GTTTTATTCGAATTCATTATTTTTAAAGTTTTTATTATGGAATCAACCAA
AGGCACAACTCTAGAAACAGTACACCAAAAGTCTCCGGCCAAACGAACAA
TAACATTCCGTCCATTCAAAAGGGGAAATGTTACTATGTCACAGTCACAC
TAAAGGTGATATGATCAGAGACCAGAAAGATCCATACTCCATGTCAGGGT
ACTGGGAGATCTGCGAAAAATCTAATAATGCTATGTTCGCATCACTTAAG
AGCGAGGCAACCAACCTTCCGAATATTCAGAGATTAATATTTTGTCCCCT
TAAAAAGATTTCTTCTGATCCAAACAACAAAAATTGTTCAGCTGTAGGTC
ACTAAATAGATAAATTATTCTGGCCTATGAAACCTGGTTTATGCCGATAC
ATTAAAAGCAACAGGAATGACTTAGGTAAATCTGCTCAATCGAGAGGTAA
TCATAGCTCATCTTCAGTTTTCTCTCCGCTTGCTGGTTTCCCATTTACTG
TTACAAGCTCGGTGTCAAAGATCAATGTTGCTCCACCTGGGATGGTAGGG
GGAGAACCCTGNGCCCCATAACCAAGCTTTGCAGGAATTTTCAACTTTCG
CTTCTCACCGACGCACATTCCCAAAAAGTCCTTGGTCCCATCCTTTGATT
ACATGACCGCTGCCAAGCTCAAATTCAATGGGAATCACCCTCTTTTCAAA
A
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